-/*-------------------------------------------------------------------------
-
- Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
- l'Image). All rights reserved. See Doc/License.txt or
- http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details.
-
+/*=========================================================================
+ Program: vv http://www.creatis.insa-lyon.fr/rio/vv
+
+ Authors belong to:
+ - University of LYON http://www.universite-lyon.fr/
+ - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
+
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- PURPOSE. See the above copyright notices for more information.
-
- -------------------------------------------------------------------------*/
+ PURPOSE. See the copyright notices for more information.
+
+ It is distributed under dual licence
+ - BSD See included LICENSE.txt file
+ - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+======================================================================-====*/
#ifndef CLITKIMAGEFILLREGIONGENERICFILTER_TXX
#define CLITKIMAGEFILLREGIONGENERICFILTER_TXX
*
-------------------------------------------------*/
-//--------------------------------------------------------------------
-template<unsigned int Dim>
-void ImageFillRegionGenericFilter::Update_WithDim() {
-#define TRY_TYPE(TYPE) \
- if (IsSameType<TYPE>(mPixelTypeName)) { Update_WithDimAndPixelType<Dim, TYPE>(); return; }
- // TRY_TYPE(signed char);
- // TRY_TYPE(uchar);
- TRY_TYPE(short);
- //TRY_TYPE(ushort);
- // TRY_TYPE(int);
- // TRY_TYPE(unsigned int);
- TRY_TYPE(float);
- // TRY_TYPE(double);
-#undef TRY_TYPE
-
- std::string list = CreateListOfTypes<uchar, short, ushort, int, uint, float, double>();
- std::cerr << "Error, I don't know the type '" << mPixelTypeName << "' for the input image '"
- << mInputFilenames[0] << "'." << std::endl << "Known types are " << list << std::endl;
- exit(0);
-}
-//--------------------------------------------------------------------
-
-//--------------------------------------------------------------------
-template<unsigned int Dim, class PixelType>
-void ImageFillRegionGenericFilter::Update_WithDimAndPixelType() {
-
- // Spheric region
- if (mSphericRegion) return Update_WithDimAndPixelType_SphericRegion<Dim,PixelType>();
-
- // Read input
- typedef itk::Image<PixelType,Dim> ImageType;
- typename ImageType::Pointer input = GetInput<ImageType>(0);
-
- // Get pixel value in correct type
- PixelType value = PixelTypeDownCast<double, PixelType>(mPixelValue);
-
- // Get region
- typedef typename ImageType::RegionType RegionType;
- typedef typename ImageType::SizeType SizeType;
- typedef typename ImageType::IndexType IndexType;
- RegionType region;
- SizeType size;
- IndexType start;
- for(unsigned int i=0; i<Dim; i++) {
- size[i] = mSize[i];
- start[i] = mStart[i];
- }
- region.SetSize(size);
- region.SetIndex(start);
-
- // Build iterator
- typedef itk::ImageRegionIterator<ImageType> IteratorType;
- IteratorType it(input, region);
- it.GoToBegin();
- while (!it.IsAtEnd()) {
- it.Set(value);
- ++it;
- }
-
- // Write results
- SetNextOutput<ImageType>(input);
-}
-//--------------------------------------------------------------------
-
-//--------------------------------------------------------------------
-template<unsigned int Dim, class PixelType>
-void ImageFillRegionGenericFilter::Update_WithDimAndPixelType_SphericRegion() {
-
- // Read input
- typedef itk::Image<PixelType,Dim> ImageType;
- //typename ImageType::Pointer input = clitk::readImage<ImageType>(mInputFilenames[0], mIOVerbose);
- typename ImageType::Pointer input = GetInput<ImageType>(0);
-
- // Get pixel value in correct type
- PixelType value = PixelTypeDownCast<double, PixelType>(mPixelValue);
-
- // Centered?
- if(m_IsCentered)
- {
- typename ImageType::SizeType size= input->GetLargestPossibleRegion().GetSize();
- typename ImageType::SpacingType spacing= input->GetSpacing();
- typename ImageType::PointType origin= input->GetOrigin();
- mCenter.resize(Dim);
- for (unsigned int i=0; i<Dim; i++)
- mCenter[i]=origin[i]+(double)size[i]/2*spacing[i];
- }
-
- // Build iterator
- typedef itk::ImageRegionIteratorWithIndex<ImageType> IteratorType;
- IteratorType it(input, input->GetLargestPossibleRegion());
- it.GoToBegin();
-
- typename ImageType::PointType point;
- //typename itk::Vector<double, Dim> distance;
- typename ImageType::IndexType index;
- //bool inside;
- double distance;
-
- while (!it.IsAtEnd())
- {
- // inside=true;
- index=it.GetIndex();
- input->TransformIndexToPhysicalPoint(index, point);
- distance=0.0;
- for(unsigned int i=0; i<Dim; i++)
- distance+=powf( ( (mCenter[i]-point[i])/mRadius[i] ), 2);
-
- // inside= ( (fabs(distance[i])<fabs(mRadius[i])) && inside );
- // distance[i]=mCenter[i]-point[i];
- // inside= ( (fabs(distance[i])<fabs(mRadius[i])) && inside );
- // }
-
- if (distance<1)
- it.Set(value);
- ++it;
- }
-
- // Write results
- SetNextOutput<ImageType>(input);
-}
-
-//--------------------------------------------------------------------
-
#endif //#define CLITKIMAGEFILLREGIONGENERICFILTER_TXX
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff