%module gdcm
%{
+#include <iostream>
+
#include "gdcmCommon.h"
+#include "gdcmBase.h"
#include "gdcmDict.h"
#include "gdcmDictEntry.h"
#include "gdcmDictSet.h"
#include "gdcmDocEntrySet.h"
#include "gdcmDocument.h"
#include "gdcmElementSet.h"
-#include "gdcmFile.h"
+#include "gdcmFileHelper.h"
#include "gdcmGlobal.h"
-#include "gdcmHeader.h"
-#include "gdcmSerieHeader.h"
+#include "gdcmFile.h"
+#include "gdcmSerieHelper.h"
#include "gdcmRLEFramesInfo.h"
#include "gdcmJPEGFragmentsInfo.h"
#include "gdcmSQItem.h"
#include "gdcmUtil.h"
+#include "gdcmDocEntry.h"
+#include "gdcmContentEntry.h"
#include "gdcmValEntry.h"
+#include "gdcmBinEntry.h"
+#include "gdcmSeqEntry.h"
////////////////////////////////////////////////////////////////////////////
/// Refer (below) to the definition of multi-argument typemap
/////////////////////// typemap section ////////////////////////////////////
////////////////////////////////////////////////
-// Convert an STL list<> to a python native list
-%typemap(out) std::list<std::string> *
+// Redefine all types used
+typedef char int8_t;
+typedef unsigned char uint8_t;
+typedef short int16_t;
+typedef unsigned short uint16_t;
+typedef int int32_t;
+typedef unsigned int uint32_t;
+typedef long long int64_t;
+typedef unsigned long long uint64_t;
+
+////////////////////////////////////////////////
+// Convert a DocEntry * to the real derived class
+%typemap(out) gdcm::DocEntry *
{
- PyObject* NewItem = (PyObject*)0;
- PyObject* NewList = PyList_New(0); // The result of this typemap
+ PyObject *newEntry;
- for (std::list<std::string>::iterator NewString = ($1)->begin();
- NewString != ($1)->end();
- ++NewString)
+ if($1)
{
- NewItem = PyString_FromString(NewString->c_str());
- PyList_Append( NewList, NewItem);
+ if(dynamic_cast<SeqEntry *>($1)) // SeqEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__SeqEntry,0);
+ else if(dynamic_cast<BinEntry *>($1)) // BinEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__BinEntry,0);
+ else // ValEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__ValEntry,0);
}
- $result = NewList;
+ else
+ {
+ newEntry = Py_BuildValue("");
+ }
+ $result = newEntry;
}
+////////////////////////////////////////////////
+// Convert an STL list<> to a python native list
+//%typemap(out) std::list<std::string> *
+//{
+// PyObject *newItem = (PyObject *)0;
+// PyObject *newList = PyList_New(0); // The result of this typemap
+//
+// for (std::list<std::string>::iterator strIt = ($1)->begin();
+// strIt != ($1)->end();
+// ++strIt)
+// {
+// newItem = PyString_FromString(strIt->c_str());
+// PyList_Append( newList, newItem);
+// }
+// $result = newList;
+//}
+
//////////////////////////////////////////////////////////////////
// Convert an STL map<> (hash table) to a python native dictionary
-%typemap(out) std::map<std::string, std::list<std::string> > *
-{
- PyObject* NewDict = PyDict_New(); // The result of this typemap
- PyObject* NewKey = (PyObject*)0;
- PyObject* NewVal = (PyObject*)0;
-
- for (std::map<std::string,
- std::list<std::string> >::iterator tag = ($1)->begin();
- tag != ($1)->end(); ++tag)
- {
- std::string first = tag->first;
- // Do not publish entries whose keys is made of spaces
- if (first.length() == 0)
- continue;
- NewKey = PyString_FromString(first.c_str());
- PyObject* NewList = PyList_New(0);
- for (std::list<std::string>::iterator Item = tag->second.begin();
- Item != tag->second.end();
- ++Item)
- {
- NewVal = PyString_FromString(Item->c_str());
- PyList_Append( NewList, NewVal);
- }
- PyDict_SetItem( NewDict, NewKey, NewList);
- }
- $result = NewDict;
-}
+//%typemap(out) std::map<std::string, std::list<std::string> > *
+//{
+// PyObject *newDict = PyDict_New(); // The result of this typemap
+// PyObject *newKey = (PyObject *)0;
+// PyObject *newVal = (PyObject *)0;
+//
+// for (std::map<std::string,
+// std::list<std::string> >::iterator tag = ($1)->begin();
+// tag != ($1)->end(); ++tag)
+// {
+// std::string first = tag->first;
+// // Do not publish entries whose keys is made of spaces
+// if (first.length() == 0)
+// continue;
+// newKey = PyString_FromString(first.c_str());
+//
+// PyObject *newList = PyList_New(0);
+// for (std::list<std::string>::iterator itemIt = tag->second.begin();
+// itemIt != tag->second.end();
+// ++itemIt)
+// {
+// newVal = PyString_FromString(itemIt->c_str());
+// PyList_Append( newList, newVal);
+// }
+// PyDict_SetItem( newDict, newKey, newList);
+// }
+// $result = newDict;
+//}
/////////////////////////////////////////////////////////
// Convert a c++ hash table in a python native dictionary
-%typemap(out) gdcm::TagDocEntryHT &
-{
- PyObject* NewDict = PyDict_New(); // The result of this typemap
- std::string RawName; // Element name as gotten from gdcm
- PyObject* NewKey = (PyObject*)0; // Associated name as python object
- std::string RawValue; // Element value as gotten from gdcm
- PyObject* NewVal = (PyObject*)0; // Associated value as python object
-
- for (gdcm::TagDocEntryHT::iterator tag = $1->begin(); tag != $1->end(); ++tag)
- {
- // The element name shall be the key:
- RawName = tag->second->GetName();
- // gdcm unrecognized (including not loaded because their size exceeds
- // the user specified treshold) elements are exported with their
- // TagKey as key.
- if (RawName == "Unknown")
- RawName = tag->second->GetKey();
- NewKey = PyString_FromString(RawName.c_str());
-
- // Element values are striped from leading/trailing spaces
- if (gdcm::ValEntry* ValEntryPtr =
- dynamic_cast< gdcm::ValEntry* >(tag->second) )
- {
- RawValue = ValEntryPtr->GetValue();
- }
- else
- continue;
- NewVal = PyString_FromString(RawValue.c_str());
- PyDict_SetItem( NewDict, NewKey, NewVal);
- }
- $result = NewDict;
-}
+//%typemap(out) gdcm::TagDocEntryHT &
+//{
+// PyObject *newDict = PyDict_New(); // The result of this typemap
+// std::string rawName; // Element name as gotten from gdcm
+// PyObject *newKey = (PyObject *)0; // Associated name as python object
+// std::string rawValue; // Element value as gotten from gdcm
+// PyObject *newVal = (PyObject *)0; // Associated value as python object
+//
+// for (gdcm::TagDocEntryHT::iterator tag = $1->begin(); tag != $1->end(); ++tag)
+// {
+// // The element name shall be the key:
+// rawName = tag->second->GetName();
+// // gdcm unrecognized (including not loaded because their size exceeds
+// // the user specified treshold) elements are exported with their
+// // TagKey as key.
+// if (rawName == "Unknown")
+// rawName = tag->second->GetKey();
+// newKey = PyString_FromString(rawName.c_str());
+//
+// // Element values are striped from leading/trailing spaces
+// gdcm::ValEntry *valEntryPtr = dynamic_cast< gdcm::ValEntry* >(tag->second);
+// if ( valEntryPtr )
+// {
+// rawValue = valEntryPtr->GetValue();
+// }
+// else
+// continue;
+// newVal = PyString_FromString(rawValue.c_str());
+// PyDict_SetItem( newDict, newKey, newVal);
+// }
+// $result = newDict;
+//}
/////////////////////////////////////
-%typemap(out) ListDicomDirPatient &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirPatient *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirPatient,1);
- PyList_Append($result, NewItem);
- }
-}
-
-%typemap(out) ListDicomDirStudy &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirStudy *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirStudy,1);
- PyList_Append($result, NewItem);
- }
-}
-
-%typemap(out) ListDicomDirSerie &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
+//%typemap(out) ListDicomDirPatient &
+//{
+// PyObject *newItem = (PyObject *)0;
+// $result = PyList_New(0); // The result of this typemap
+//
+// for (std::list<gdcm::DicomDirPatient *>::iterator newIt = ($1)->begin();
+// newIt != ($1)->end(); ++newIt)
+// {
+// newItem = SWIG_NewPointerObj(*newIt,SWIGTYPE_p_DicomDirPatient,0);
+// PyList_Append($result, newItem);
+// }
+//}
- for (std::list<gdcm::DicomDirSerie *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirSerie,1);
- PyList_Append($result, NewItem);
- }
-}
+//%typemap(out) ListDicomDirStudy &
+//{
+// PyObject *newItem = (PyObject *)0;
+// $result = PyList_New(0); // The result of this typemap
+//
+// for (std::list<gdcm::DicomDirStudy *>::iterator newIt = ($1)->begin();
+// newIt != ($1)->end(); ++newIt)
+// {
+// newItem = SWIG_NewPointerObj(*newIt,SWIGTYPE_p_DicomDirStudy,0);
+// PyList_Append($result, newItem);
+// }
+//}
-%typemap(out) ListDicomDirImage &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
+//%typemap(out) ListDicomDirSerie &
+//{
+// PyObject* newItem = (PyObject*)0;
+// $result = PyList_New(0); // The result of this typemap
+//
+// for (std::list<gdcm::DicomDirSerie *>::iterator newIt = ($1)->begin();
+// newIt != ($1)->end(); ++newIt)
+// {
+// newItem = SWIG_NewPointerObj(*newIt,SWIGTYPE_p_DicomDirSerie,0);
+// PyList_Append($result, newItem);
+// }
+//}
- for (std::list<gdcm::DicomDirImage *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirImage,1);
- PyList_Append($result, NewItem);
- }
-}
+//%typemap(out) ListDicomDirImage &
+//{
+// PyObject* newItem = (PyObject*)0;
+// $result = PyList_New(0); // The result of this typemap
+//
+// for (std::list<gdcm::DicomDirImage *>::iterator newIt = ($1)->begin();
+// newIt != ($1)->end(); ++newIt)
+// {
+// newItem = SWIG_NewPointerObj(*newIt,SWIGTYPE_p_DicomDirImage,0);
+// PyList_Append($result, newItem);
+// }
+//}
////////////////////////////////////////////////////////////////////////////
// Multi-argument typemap designed for wrapping the progress related methods
//////////////////// STL string versus Python str ////////////////////////
// Convertion returning a C++ string.
-%typemap(out) string, std::string
+%typemap(out) std::string
+{
+ $result = PyString_FromString(($1).c_str());
+}
+
+%typemap(out) string
{
$result = PyString_FromString(($1).c_str());
}
+%typemap(out) std::string const &
+{
+ $result = PyString_FromString(($1)->c_str());
+}
+
// Convertion of incoming Python str to STL string
%typemap(python, in) const std::string, std::string
{
$1 = new std::string( PyString_AsString( $input ) );
}
+//////////////////// gdcm.TagName versus Python str //////////////////////
+%typemap(out) gdcm::TagName, const gdcm::TagName &
+{
+ $result = PyString_FromString(($1)->c_str());
+}
+
+// Convertion of incoming Python str to STL string
+%typemap(python, in) const gdcm::TagName, gdcm::TagName
+{
+ $1 = PyString_AsString($input);
+}
+
+// Same convertion as above but references (since swig converts C++
+// refererences to pointers)
+%typemap(python, in) gdcm::TagName const &
+{
+ $1 = new std::string( PyString_AsString( $input ) );
+}
+
+
////////////////////////////////////////////////////////////////////////////
// Because overloading and %rename don't work together (see below Note 1)
// we need to ignore some methods (e.g. the overloaded default constructor).
-// The gdcm::Header class doesn't have any SetFilename method anyhow, and
+// The gdcm::File class doesn't have any SetFilename method anyhow, and
// this constructor is only used internaly (not from the API) so this is
// not a big loss.
%ignore gdcm::binary_write(std::ostream &,uint32_t const &);
%ignore gdcm::binary_write(std::ostream &,uint16_t const &);
-%ignore gdcm::Header::Header();
+%ignore gdcm::File::File();
%ignore gdcm::DicomDir::DicomDir();
+// Ignore all placed in gdcmCommon.h
+%ignore GDCM_UNKNOWN;
+%ignore GDCM_UNFOUND;
+%ignore GDCM_BINLOADED;
+%ignore GDCM_NOTLOADED;
+%ignore GDCM_UNREAD;
+
////////////////////////////////////////////////////////////////////////////
// Warning: Order matters !
%include "gdcmCommon.h"
+%include "gdcmBase.h"
%include "gdcmDictEntry.h"
%include "gdcmDict.h"
+%include "gdcmDictSet.h"
%include "gdcmDocEntrySet.h"
%include "gdcmElementSet.h"
-%include "gdcmDictSet.h"
%include "gdcmSQItem.h"
%include "gdcmDicomDirElement.h"
%include "gdcmDicomDirObject.h"
%include "gdcmDicomDirPatient.h"
%include "gdcmDicomDirMeta.h"
%include "gdcmDocument.h"
-%include "gdcmHeader.h"
-%include "gdcmSerieHeader.h"
+%include "gdcmFile.h"
+%include "gdcmSerieHelper.h"
%include "gdcmFile.h"
%include "gdcmUtil.h"
%include "gdcmGlobal.h"
%include "gdcmDicomDir.h"
+%include "gdcmDocEntry.h"
+%include "gdcmContentEntry.h"
+%include "gdcmValEntry.h"
+%include "gdcmBinEntry.h"
+%include "gdcmSeqEntry.h"
////////////////////////////////////////////////////////////////////////////
// Notes on swig and this file gdcm.i: