%module gdcm
%{
-#include "gdcm.h"
+#include "gdcmCommon.h"
+#include "gdcmDictEntry.h"
+#include "gdcmDict.h"
+#include "gdcmDictSet.h"
+#include "gdcmParser.h"
+#include "gdcmHeaderEntry.h"
+#include "gdcmHeader.h"
+#include "gdcmHeaderHelper.h"
+#include "gdcmFile.h"
+#include "gdcmUtil.h"
+#include "gdcmGlobal.h"
+#include "gdcmObject.h"
+#include "gdcmDicomDir.h"
+#include "gdcmDicomDirElement.h"
+#include "gdcmDicomDirMeta.h"
+#include "gdcmDicomDirPatient.h"
+#include "gdcmDicomDirStudy.h"
+#include "gdcmDicomDirSerie.h"
+#include "gdcmDicomDirImage.h"
+////////////////////////////////////////////////////////////////////////////
// Utility functions on strings for removing leading and trailing spaces
-void EatLeadingAndTrailingSpaces(string & s) {
+void EatLeadingAndTrailingSpaces(std::string & s) {
while ( s.length() && (s[0] == ' ') )
s.erase(0,1);
while ( s.length() && (s[s.length()-1] == ' ') )
s.erase(s.length()-1, 1);
}
+
+void gdcmPythonVoidFunc(void *arg)
+{
+ PyObject *arglist, *result;
+ PyObject *func = (PyObject *)arg;
+
+ arglist = Py_BuildValue("()");
+
+ result = PyEval_CallObject(func, arglist);
+ Py_DECREF(arglist);
+
+ if (result)
+ {
+ Py_XDECREF(result);
+ }
+ else
+ {
+ if (PyErr_ExceptionMatches(PyExc_KeyboardInterrupt))
+ {
+ std::cerr << "Caught a Ctrl-C within python, exiting program.\n";
+ Py_Exit(1);
+ }
+ PyErr_Print();
+ }
+}
+
+void gdcmPythonVoidFuncArgDelete(void *arg)
+{
+ PyObject *func = (PyObject *)arg;
+ if (func)
+ {
+ Py_DECREF(func);
+ }
+}
+
%}
typedef unsigned short guint16;
typedef unsigned int guint32;
-%typemap(out) list<string> * {
+////////////////////////////////////////////////////////////////////////////
+// Global variables get exported to cvar in Python
+%immutable;
+extern gdcmGlobal gdcmGlob;
+%mutable;
+
+////////////////////////////////////////////////////////////////////////////
+%typemap(out) std::list<std::string> * {
PyObject* NewItem = (PyObject*)0;
PyObject* NewList = PyList_New(0); // The result of this typemap
- for (list<string>::iterator NewString = ($1)->begin();
+ for (std::list<std::string>::iterator NewString = ($1)->begin();
NewString != ($1)->end(); ++NewString) {
NewItem = PyString_FromString(NewString->c_str());
PyList_Append( NewList, NewItem);
$result = NewList;
}
-%typemap(out) map<string, list<string> > * {
+////////////////////////////////////////////////////////////////////////////
+// Convert a c++ hash table in a python native dictionary
+%typemap(out) std::map<std::string, std::list<std::string> > * {
PyObject* NewDict = PyDict_New(); // The result of this typemap
PyObject* NewKey = (PyObject*)0;
PyObject* NewVal = (PyObject*)0;
- for (map<string, list<string> >::iterator tag = ($1)->begin();
+ for (std::map<std::string, std::list<std::string> >::iterator tag = ($1)->begin();
tag != ($1)->end(); ++tag) {
- NewKey = PyString_FromString(tag->first.c_str());
+ std::string first = tag->first;
+ // Do not publish entries whose keys is made of spaces
+ if (first.length() == 0)
+ continue;
+ NewKey = PyString_FromString(first.c_str());
PyObject* NewList = PyList_New(0);
- for (list<string>::iterator Item = tag->second.begin();
+ for (std::list<std::string>::iterator Item = tag->second.begin();
Item != tag->second.end(); ++Item) {
NewVal = PyString_FromString(Item->c_str());
PyList_Append( NewList, NewVal);
$result = NewDict;
}
-// Return an hash table as a python native dictionary
-%typemap(out) TagElValueHT & {
+////////////////////////////////////////////////////////////////////////////
+// Convert a c++ hash table in a python native dictionary
+%typemap(out) TagHeaderEntryHT & {
PyObject* NewDict = PyDict_New(); // The result of this typemap
- string RawName; // Element name as gotten from gdcm
+ std::string RawName; // Element name as gotten from gdcm
PyObject* NewKey = (PyObject*)0; // Associated name as python object
- string RawValue; // Element value as gotten from gdcm
+ std::string RawValue; // Element value as gotten from gdcm
PyObject* NewVal = (PyObject*)0; // Associated value as python object
- for (TagElValueHT::iterator tag = $1->begin(); tag != $1->end(); ++tag) {
+ for (TagHeaderEntryHT::iterator tag = $1->begin(); tag != $1->end(); ++tag) {
// The element name shall be the key:
RawName = tag->second->GetName();
$result = NewDict;
}
-%include gdcm.h
+%typemap(out) TagHeaderEntryHT {
+ PyObject* NewDict = PyDict_New(); // The result of this typemap
+ std::string RawName; // Element name as gotten from gdcm
+ PyObject* NewKey = (PyObject*)0; // Associated name as python object
+ std::string RawValue; // Element value as gotten from gdcm
+ PyObject* NewVal = (PyObject*)0; // Associated value as python object
+
+ for (TagHeaderEntryHT::iterator tag = $1.begin(); tag != $1.end(); ++tag) {
+
+ // The element name shall be the key:
+ RawName = tag->second->GetName();
+ // gdcm unrecognized (including not loaded because their size exceeds
+ // the user specified treshold) elements are exported with their
+ // TagKey as key.
+ if (RawName == "Unknown")
+ RawName = tag->second->GetKey();
+ NewKey = PyString_FromString(RawName.c_str());
+
+ // Element values are striped from leading/trailing spaces
+ RawValue = tag->second->GetValue();
+ EatLeadingAndTrailingSpaces(RawValue);
+ NewVal = PyString_FromString(RawValue.c_str());
+
+ PyDict_SetItem( NewDict, NewKey, NewVal);
+ }
+ $result = NewDict;
+}
+
+////////////////////////////////////////////////////////////////////////////
+%typemap(out) ListDicomDirPatient & {
+ PyObject* NewItem = (PyObject*)0;
+ $result = PyList_New(0); // The result of this typemap
+
+ for (std::list<gdcmDicomDirPatient *>::iterator New = ($1)->begin();
+ New != ($1)->end(); ++New) {
+ NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_gdcmDicomDirPatient,1);
+ PyList_Append($result, NewItem);
+ }
+}
+
+%typemap(out) ListDicomDirStudy & {
+ PyObject* NewItem = (PyObject*)0;
+ $result = PyList_New(0); // The result of this typemap
+
+ for (std::list<gdcmDicomDirStudy *>::iterator New = ($1)->begin();
+ New != ($1)->end(); ++New) {
+ NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_gdcmDicomDirStudy,1);
+ PyList_Append($result, NewItem);
+ }
+}
+
+%typemap(out) ListDicomDirSerie & {
+ PyObject* NewItem = (PyObject*)0;
+ $result = PyList_New(0); // The result of this typemap
+
+ for (std::list<gdcmDicomDirSerie *>::iterator New = ($1)->begin();
+ New != ($1)->end(); ++New) {
+ NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_gdcmDicomDirSerie,1);
+ PyList_Append($result, NewItem);
+ }
+}
+
+%typemap(out) ListDicomDirImage & {
+ PyObject* NewItem = (PyObject*)0;
+ $result = PyList_New(0); // The result of this typemap
+
+ for (std::list<gdcmDicomDirImage *>::iterator New = ($1)->begin();
+ New != ($1)->end(); ++New) {
+ NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_gdcmDicomDirImage,1);
+ PyList_Append($result, NewItem);
+ }
+}
+
+////////////////////////////////////////////////////////////////////////////
+// Deals with function returning a C++ string.
+%typemap(python, in) (gdcmMethod *,void * =NULL,gdcmMethod * =NULL) {
+ if($input!=Py_None)
+ {
+ Py_INCREF($input);
+ $1=gdcmPythonVoidFunc;
+ $2=$input;
+ $3=gdcmPythonVoidFuncArgDelete;
+ }
+ else
+ {
+ $1=NULL;
+ $2=NULL;
+ $3=NULL;
+ }
+}
+
+
+////////////////////////////////////////////////////////////////////////////
+// Deals with function returning a C++ string.
+%typemap(out) string, std::string {
+ $result = PyString_FromString(($1).c_str());
+}
+
+%typemap(python, in) const std::string, std::string
+{
+ $1 = PyString_AsString($input);
+}
+
+////////////////////////////////////////////////////////////////////////////
+%include "gdcmCommon.h"
+%include "gdcmDictEntry.h"
+%include "gdcmDict.h"
+%include "gdcmDictSet.h"
+%include "gdcmParser.h"
+%include "gdcmHeaderEntry.h"
+%include "gdcmHeader.h"
+%include "gdcmHeaderHelper.h"
+%include "gdcmFile.h"
+%include "gdcmUtil.h"
+%include "gdcmGlobal.h"
+%include "gdcmObject.h"
+%include "gdcmDicomDir.h"
+%include "gdcmDicomDirElement.h"
+%include "gdcmDicomDirMeta.h"
+%include "gdcmDicomDirPatient.h"
+%include "gdcmDicomDirStudy.h"
+%include "gdcmDicomDirSerie.h"
+%include "gdcmDicomDirImage.h"
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff