%module gdcm
+#pragma SWIG nowarn=504
%{
+#include <iostream>
+
#include "gdcmCommon.h"
+#include "gdcmBase.h"
#include "gdcmDict.h"
#include "gdcmDictEntry.h"
#include "gdcmDictSet.h"
#include "gdcmDocEntrySet.h"
#include "gdcmDocument.h"
#include "gdcmElementSet.h"
-#include "gdcmFile.h"
+#include "gdcmFileHelper.h"
#include "gdcmGlobal.h"
-#include "gdcmHeader.h"
-#include "gdcmSerieHeader.h"
+#include "gdcmFile.h"
+#include "gdcmSerieHelper.h"
#include "gdcmRLEFramesInfo.h"
#include "gdcmJPEGFragmentsInfo.h"
#include "gdcmSQItem.h"
#include "gdcmUtil.h"
+#include "gdcmDocEntry.h"
+#include "gdcmContentEntry.h"
#include "gdcmValEntry.h"
+#include "gdcmBinEntry.h"
+#include "gdcmSeqEntry.h"
+#include "gdcmVR.h"
+#include "gdcmTS.h"
+#include "gdcmDictGroupName.h"
////////////////////////////////////////////////////////////////////////////
/// Refer (below) to the definition of multi-argument typemap
/////////////////////// typemap section ////////////////////////////////////
////////////////////////////////////////////////
-// Convert an STL list<> to a python native list
-%typemap(out) std::list<std::string> *
-{
- PyObject* NewItem = (PyObject*)0;
- PyObject* NewList = PyList_New(0); // The result of this typemap
+// Redefine all types used
+typedef char int8_t;
+typedef unsigned char uint8_t;
+typedef short int16_t;
+typedef unsigned short uint16_t;
+typedef int int32_t;
+typedef unsigned int uint32_t;
+typedef long long int64_t;
+typedef unsigned long long uint64_t;
- for (std::list<std::string>::iterator NewString = ($1)->begin();
- NewString != ($1)->end();
- ++NewString)
- {
- NewItem = PyString_FromString(NewString->c_str());
- PyList_Append( NewList, NewItem);
- }
- $result = NewList;
-}
-
-//////////////////////////////////////////////////////////////////
-// Convert an STL map<> (hash table) to a python native dictionary
-%typemap(out) std::map<std::string, std::list<std::string> > *
+////////////////////////////////////////////////
+// Convert a DocEntry * to the real derived class
+%typemap(out) gdcm::DocEntry *
{
- PyObject* NewDict = PyDict_New(); // The result of this typemap
- PyObject* NewKey = (PyObject*)0;
- PyObject* NewVal = (PyObject*)0;
+ PyObject *newEntry;
- for (std::map<std::string,
- std::list<std::string> >::iterator tag = ($1)->begin();
- tag != ($1)->end(); ++tag)
+ if($1)
{
- std::string first = tag->first;
- // Do not publish entries whose keys is made of spaces
- if (first.length() == 0)
- continue;
- NewKey = PyString_FromString(first.c_str());
- PyObject* NewList = PyList_New(0);
- for (std::list<std::string>::iterator Item = tag->second.begin();
- Item != tag->second.end();
- ++Item)
- {
- NewVal = PyString_FromString(Item->c_str());
- PyList_Append( NewList, NewVal);
- }
- PyDict_SetItem( NewDict, NewKey, NewList);
+ if(dynamic_cast<SeqEntry *>($1)) // SeqEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__SeqEntry,0);
+ else if(dynamic_cast<BinEntry *>($1)) // BinEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__BinEntry,0);
+ else // ValEntry *
+ newEntry = SWIG_NewPointerObj($1,SWIGTYPE_p_gdcm__ValEntry,0);
}
- $result = NewDict;
-}
-
-/////////////////////////////////////////////////////////
-// Convert a c++ hash table in a python native dictionary
-%typemap(out) gdcm::TagDocEntryHT &
-{
- PyObject* NewDict = PyDict_New(); // The result of this typemap
- std::string RawName; // Element name as gotten from gdcm
- PyObject* NewKey = (PyObject*)0; // Associated name as python object
- std::string RawValue; // Element value as gotten from gdcm
- PyObject* NewVal = (PyObject*)0; // Associated value as python object
-
- for (gdcm::TagDocEntryHT::iterator tag = $1->begin(); tag != $1->end(); ++tag)
+ else
{
- // The element name shall be the key:
- RawName = tag->second->GetName();
- // gdcm unrecognized (including not loaded because their size exceeds
- // the user specified treshold) elements are exported with their
- // TagKey as key.
- if (RawName == "Unknown")
- RawName = tag->second->GetKey();
- NewKey = PyString_FromString(RawName.c_str());
-
- // Element values are striped from leading/trailing spaces
- if (gdcm::ValEntry* ValEntryPtr =
- dynamic_cast< gdcm::ValEntry* >(tag->second) )
- {
- RawValue = ValEntryPtr->GetValue();
- }
- else
- continue;
- NewVal = PyString_FromString(RawValue.c_str());
- PyDict_SetItem( NewDict, NewKey, NewVal);
+ newEntry = Py_BuildValue("");
}
- $result = NewDict;
-}
-
-/////////////////////////////////////
-%typemap(out) ListDicomDirPatient &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirPatient *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirPatient,1);
- PyList_Append($result, NewItem);
- }
-}
-
-%typemap(out) ListDicomDirStudy &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirStudy *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirStudy,1);
- PyList_Append($result, NewItem);
- }
-}
-
-%typemap(out) ListDicomDirSerie &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirSerie *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirSerie,1);
- PyList_Append($result, NewItem);
- }
-}
-
-%typemap(out) ListDicomDirImage &
-{
- PyObject* NewItem = (PyObject*)0;
- $result = PyList_New(0); // The result of this typemap
-
- for (std::list<gdcm::DicomDirImage *>::iterator New = ($1)->begin();
- New != ($1)->end(); ++New)
- {
- NewItem = SWIG_NewPointerObj(*New,SWIGTYPE_p_DicomDirImage,1);
- PyList_Append($result, NewItem);
- }
+ $result = newEntry;
}
////////////////////////////////////////////////////////////////////////////
// Note: Uses gdcmPythonVoidFunc and gdcmPythonVoidFuncArgDelete defined
// in the Swig verbatim section of this gdcm.i i.e. in the above section
// enclosed within the %{ ... %} scope operator ).
-%typemap(python, in) ( gdcm::DicomDir::Method *,
- void * = NULL,
- gdcm::DicomDir::Method * = NULL )
+%typemap(python, in) (void(*method)(void *),void *arg,void(*argDelete)(void *))
{
if($input!=Py_None)
{
//////////////////// STL string versus Python str ////////////////////////
// Convertion returning a C++ string.
-%typemap(out) string, std::string
+%typemap(out) std::string
+{
+ $result = PyString_FromString(($1).c_str());
+}
+
+%typemap(out) string
{
$result = PyString_FromString(($1).c_str());
}
+%typemap(out) std::string const &
+{
+ $result = PyString_FromString(($1)->c_str());
+}
+
// Convertion of incoming Python str to STL string
%typemap(python, in) const std::string, std::string
{
$1 = new std::string( PyString_AsString( $input ) );
}
+//////////////////// gdcm.TagName versus Python str //////////////////////
+%typemap(out) gdcm::TagName, const gdcm::TagName &
+{
+ $result = PyString_FromString(($1)->c_str());
+}
+
+// Convertion of incoming Python str to STL string
+%typemap(python, in) const gdcm::TagName, gdcm::TagName
+{
+ $1 = PyString_AsString($input);
+}
+
+// Same convertion as above but references (since swig converts C++
+// refererences to pointers)
+%typemap(python, in) gdcm::TagName const &
+{
+ $1 = new std::string( PyString_AsString( $input ) );
+}
+
////////////////////////////////////////////////////////////////////////////
// Because overloading and %rename don't work together (see below Note 1)
// we need to ignore some methods (e.g. the overloaded default constructor).
-// The gdcm::Header class doesn't have any SetFilename method anyhow, and
+// The gdcm::File class doesn't have any SetFilename method anyhow, and
// this constructor is only used internaly (not from the API) so this is
// not a big loss.
-%ignore gdcm::Header::Header();
-%ignore gdcm::DicomDir::DicomDir();
+%ignore gdcm::binary_write(std::ostream &,uint32_t const &);
+%ignore gdcm::binary_write(std::ostream &,uint16_t const &);
+
+%ignore gdcm::DicomDir::SetStartMethod(DicomDir::Method *method,void *arg = NULL);
+%ignore gdcm::DicomDir::SetProgressMethod(DicomDir::Method *method,void *arg = NULL);
+%ignore gdcm::DicomDir::SetEndMethod(DicomDir::Method *method,void *arg = NULL);
+
+// Ignore all placed in gdcmCommon.h
+%ignore GDCM_UNKNOWN;
+%ignore GDCM_UNFOUND;
+%ignore GDCM_BINLOADED;
+%ignore GDCM_NOTLOADED;
+%ignore GDCM_UNREAD;
+
+%constant const char *UNKNOWN = "gdcm::Unknown";
+%constant const char *UNFOUND = "gdcm::Unfound";
+%constant const char *BINLOADED = "gdcm::Binary data loaded";
+%constant const char *NOTLOADED = "gdcm::NotLoaded";
+%constant const char *UNREAD = "gdcm::UnRead";
////////////////////////////////////////////////////////////////////////////
// Warning: Order matters !
%include "gdcmCommon.h"
-//CLEANME %include "gdcmRLEFramesInfo.h"
-//CLEANME %include "gdcmJPEGFragmentsInfo.h"
-//CLEANME %include "gdcmDictEntry.h"
-//CLEANME %include "gdcmDict.h"
-//CLEANME %include "gdcmDocEntry.h"
+%include "gdcmBase.h"
+%include "gdcmDictEntry.h"
+%include "gdcmDict.h"
+%include "gdcmDictSet.h"
%include "gdcmDocEntrySet.h"
-//CLEANME %include "gdcmElementSet.h"
-//CLEANME %include "gdcmDictSet.h"
-//CLEANME %include "gdcmTS.h"
-//CLEANME %include "gdcmVR.h"
-//CLEANME %include "gdcmSQItem.h"
+%include "gdcmElementSet.h"
+%include "gdcmSQItem.h"
%include "gdcmDicomDirElement.h"
%include "gdcmDicomDirObject.h"
%include "gdcmDicomDirImage.h"
%include "gdcmDicomDirPatient.h"
%include "gdcmDicomDirMeta.h"
%include "gdcmDocument.h"
-%include "gdcmHeader.h"
-%include "gdcmSerieHeader.h"
%include "gdcmFile.h"
+%include "gdcmSerieHelper.h"
+%include "gdcmFileHelper.h"
%include "gdcmUtil.h"
%include "gdcmGlobal.h"
%include "gdcmDicomDir.h"
+%include "gdcmDocEntry.h"
+%include "gdcmContentEntry.h"
+%include "gdcmValEntry.h"
+%include "gdcmBinEntry.h"
+%include "gdcmSeqEntry.h"
+%include "gdcmVR.h"
+%include "gdcmTS.h"
+%include "gdcmDictGroupName.h"
////////////////////////////////////////////////////////////////////////////
// Notes on swig and this file gdcm.i:
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff