reconstruct with dilatation (jef)

[clitk.git] / itk / clitkReconstructThroughDilationImageFilter.h

diff --git a/itk/clitkReconstructThroughDilationImageFilter.h b/itk/clitkReconstructThroughDilationImageFilter.h
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+++ b/itk/clitkReconstructThroughDilationImageFilter.h
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+#ifndef clitkReconstructThroughDilationImageFilter_h
+#define clitkReconstructThroughDilationImageFilter_h
+
+/* =================================================
+ * @file   clitkReconstructThroughDilationImageFilter.h
+ * @author 
+ * @date   
+ * 
+ * @brief 
+ * 
+ ===================================================*/
+
+
+// clitk include
+#include "clitkIO.h"
+#include "clitkCommon.h"
+#include "clitkConditionalBinaryDilateImageFilter.h"
+
+//itk include
+#include "itkImageToImageFilter.h"
+#include "itkBinaryBallStructuringElement.h"
+#include "itkConnectedComponentImageFilter.h"
+#include "itkStatisticsImageFilter.h"
+#include "itkCastImageFilter.h"
+#include "itkDifferenceImageFilter.h"
+#include "itkThresholdImageFilter.h"
+
+namespace clitk 
+{
+
+  template <class InputImageType, class OutputImageType>
+  class ITK_EXPORT ReconstructThroughDilationImageFilter :
+    public itk::ImageToImageFilter<InputImageType, OutputImageType>
+  {
+  public:
+    //----------------------------------------
+    // ITK
+    //----------------------------------------
+    typedef ReconstructThroughDilationImageFilter                                                 Self;
+    typedef itk::ImageToImageFilter<InputImageType, OutputImageType>  Superclass;
+    typedef itk::SmartPointer<Self>                                   Pointer;
+    typedef itk::SmartPointer<const Self>                             ConstPointer;
+   
+    // Method for creation through the object factory
+    itkNewMacro(Self);  
+
+    // Run-time type information (and related methods)
+    itkTypeMacro( ReconstructThroughDilationImageFilter, ImageToImageFilter );
+
+    /** Dimension of the domain space. */
+    itkStaticConstMacro(InputImageDimension, unsigned int, Superclass::InputImageDimension);
+    itkStaticConstMacro(OutputImageDimension, unsigned int, Superclass::OutputImageDimension);
+
+    //----------------------------------------
+    // Typedefs
+    //----------------------------------------
+    typedef typename OutputImageType::RegionType OutputImageRegionType;
+    typedef int InternalPixelType;
+    typedef typename InputImageType::PixelType InputPixelType;
+    typedef typename OutputImageType::PixelType OutputPixelType;
+    typedef typename InputImageType::SizeType SizeType;
+
+    //----------------------------------------
+    // Set & Get
+    //----------------------------------------    
+    itkBooleanMacro(Verbose);
+    itkSetMacro( Verbose, bool);
+    itkGetConstReferenceMacro( Verbose, bool);
+    void SetRadius ( const SizeType& s){ m_Radius=s; this->Modified();}
+    SizeType GetRadius(void){return m_Radius;}
+    itkSetMacro( ErosionPaddingValue, OutputPixelType);
+    itkGetConstMacro( ErosionPaddingValue, OutputPixelType)
+    itkSetMacro( MaximumNumberOfLabels, unsigned int);
+    itkGetConstMacro( MaximumNumberOfLabels, unsigned int);
+    itkSetMacro( BackgroundValue, InternalPixelType);
+    itkGetConstMacro( BackgroundValue, InternalPixelType);
+    itkSetMacro( ForegroundValue, InternalPixelType);
+    itkGetConstMacro( ForegroundValue, InternalPixelType);
+
+  protected:
+
+    //----------------------------------------  
+    // Constructor & Destructor
+    //----------------------------------------  
+    ReconstructThroughDilationImageFilter();
+    ~ReconstructThroughDilationImageFilter() {};
+
+    //----------------------------------------  
+    // Update
+    //----------------------------------------  
+    // Generate Data
+    void GenerateData(void);
+
+    //     // Threaded Generate Data
+    //     void BeforeThreadedGenerateData(void );
+    //     void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, int threadId );
+    //     void AfterThreadedGenerateData(void );
+    //     // Override defaults
+    //     virtual void GenerateInputRequestedRegion();
+    //     virtual void GenerateOutputInformation (void);
+    //     virtual void EnlargeOutputRequestedRegion(DataObject *data);
+    //     void AllocateOutputs();
+    //----------------------------------------  
+    // Data members
+    //----------------------------------------
+    bool m_Verbose;
+    InternalPixelType m_BackgroundValue;
+    InternalPixelType m_ForegroundValue;
+    unsigned int m_MaximumNumberOfLabels;
+    OutputPixelType m_ErosionPaddingValue;
+    SizeType m_Radius;
+
+  };
+
+
+} // end namespace clitk
+
+#ifndef ITK_MANUAL_INSTANTIATION
+#include "clitkReconstructThroughDilationImageFilter.txx"
+#endif
+
+#endif // #define clitkReconstructThroughDilationImageFilter_h
+
+