Added ITK Segmentation Algorithm

[creaContours.git] / lib / Interface_ManagerContour_NDimensions / wxContourMainFrame.h

diff --git a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h
index 5f2ad32edd3789d9aa334e182ad365551410e26c..b48f08a17e482b05d5fc7a2876045df3d6ddf4e6 100644 (file)
--- a/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h
+++ b/lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h
@@ -22,19 +22,16 @@
 #include "wx/aui/aui.h"
 
 #include "interfMainPanel.h"
+#include "KernelManagerContour.h"
 
-#include "wxVtkBaseView_SceneManager.h"
+//#include "wxVtkBaseView_SceneManager.h"
 #include "wxInstantChooserPanel.h"
 #include "wxContourViewPanel.h"
 
-#include "KernelManagerContour.h"
-
-#include "ContourWorkspace.h"
-#include "contour/contourextractdata.h"
-
-
 
 
+//#include "ContourWorkspace.h"
+#include "ContourExtractData.h"
 #include "PerformingOperation.h"
 
 
@@ -45,37 +42,58 @@
 //#include "ImageSectionThing.h"
 //#include "InstantMembersNameList.h"
 //#include "OutlineGroup.h"
-#include "SomeEnvironment.h"
-#include "ContourWorkspace.h"
-#include "ContourWrap_ViewControl.h"
-#include "Instant.h"
-#include "PerformingOperation.h"
+//#include "SomeEnvironment.h"
+//#include "ContourWorkspace.h"
+//#include "ContourWrap_ViewControl.h"
+//#include "Instant.h"
+//#include "PerformingOperation.h"
 
-#include "ContourThing.h"
+//#include "ContourThing.h"
 
 //#include "OutlineModelManager.h"
 
-#include "wxContour_ButtonsBar.h"
-#include "wxContour_ControlPanel.h"
+//#include "wxContour_ButtonsBar.h"
+//#include "wxContour_ControlPanel.h"
+
+//#include "wxContour_Grid.h"
+//#include "wxContour_DrawToolsPanel.h"
+//#include "wxContour_OperationsToolsPanel.h"
+//#include "wxContour_AutomaticFormsToolsPanel.h"
+//#include "wxContour_StandardToolsPanel.h"
+//#include "wxContour_EdtionToolsPanel.h"
+//#include "wxContour_ListViewPanel.h"
+
 
-#include "wxContour_Grid.h"
-#include "wxContour_DrawToolsPanel.h"
-#include "wxContour_OperationsToolsPanel.h"
-#include "wxContour_AutomaticFormsToolsPanel.h"
-#include "wxContour_StandardToolsPanel.h"
-#include "wxContour_EdtionToolsPanel.h"
-#include "wxContour_ListViewPanel.h"
+//ITK
+#include "itkImage.h"
+#include "itkGeodesicActiveContourLevelSetImageFilter.h"
 
+#include "itkCurvatureAnisotropicDiffusionImageFilter.h"
+#include "itkGradientMagnitudeRecursiveGaussianImageFilter.h"
+#include "itkSigmoidImageFilter.h"
+#include "itkFastMarchingImageFilter.h"
+#include "itkRescaleIntensityImageFilter.h"
+#include "itkBinaryThresholdImageFilter.h"
+#include "itkZeroCrossingImageFilter.h"
+#include "itkCastImageFilter.h"
 
+#include "itkImageFileWriter.h"
 
+#include "itkImageToVTKImageFilter.h"
+#include "itkVTKImageToImageFilter.h"
 
+//VTK
+#include <vtkImageSeedConnectivity.h>
+#include <vtkImageMarchingCubes.h>
 #include "vtkContourFilter.h"
+#include "vtkMarchingContourFilter.h"
 #include "vtkPolyDataConnectivityFilter.h"
 #include "vtkCleanPolyData.h"
 #include "vtkImageReslice.h"
 #include "vtkMetaImageWriter.h"
 #include "vtkImageData.h"
-#include "vtkMetaImageReader.h"
+#include "vtkTransform.h"
+//#include "vtkMetaImageReader.h"
 
 //------------------------------------------------------------------------------------------------------------
 // Events declaration
@@ -101,7 +119,7 @@ class wxContourMainFrame : public wxPanel {
        
 
        wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
-       wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
+       wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER,std::string datadir="<void>");
 
        ~wxContourMainFrame();
 
@@ -124,21 +142,21 @@ class wxContourMainFrame : public wxPanel {
 
        void setInstantChooserPanel(  wxInstantChooserPanel * theInstantChooserPanel );
 
-       void setButtonsBar(  wxContour_ButtonsBar * theButtonsBar );
+//     void setButtonsBar(  wxContour_ButtonsBar * theButtonsBar );
 
-       void setGrid(  wxContour_Grid * theGridPanel );
+//     void setGrid(  wxContour_Grid * theGridPanel );
 
-       void setDrawToolsPanel(  wxContour_DrawToolsPanel * theDrawToolsPanel );
+//     void setDrawToolsPanel(  wxContour_DrawToolsPanel * theDrawToolsPanel );
 
-       void setOperationsToolsPanel(  wxContour_OperationsToolsPanel * theDrawToolsPanel );
+//     void setOperationsToolsPanel(  wxContour_OperationsToolsPanel * theDrawToolsPanel );
 
-       void setAutomaticFormsPanel(  wxContour_AutomaticFormsToolsPanel * theAutoFormsPanel );
+//     void setAutomaticFormsPanel(  wxContour_AutomaticFormsToolsPanel * theAutoFormsPanel );
 
-       void setStandardToolsPanel(  wxContour_StandardToolsPanel * theStandardToolsPanel );
+//     void setStandardToolsPanel(  wxContour_StandardToolsPanel * theStandardToolsPanel );
 
-       void setEditionToolsPanel(  wxContour_EdtionToolsPanel * theEditionToolsPanel );
+//     void setEditionToolsPanel(  wxContour_EdtionToolsPanel * theEditionToolsPanel );
 
-       void setListViewPanel(  wxContour_ListViewPanel * theListViewPanel );
+//     void setListViewPanel(  wxContour_ListViewPanel * theListViewPanel );
 
 
        ////------------------------------------------------------------------------------------------------------------
@@ -154,7 +172,7 @@ class wxContourMainFrame : public wxPanel {
        //------------------------------------------------------------------------------------------------------------
        //  Attributes getters and setters
        //------------------------------------------------------------------------------------------------------------
-       static wxContourMainFrame* getInstance(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
+       static wxContourMainFrame* getInstance(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER, std::string datadir="<void>");
        static wxContourMainFrame* getInstance();
        //------------------------------------------------------------------------------------------------------------
        //  Other functional methods
@@ -172,6 +190,7 @@ class wxContourMainFrame : public wxPanel {
        void onCreateContourSpline( );
        void onCreateContourRectangle( );
        void onCreateContourCircle( );
+       void onCreateContourLine( );
        void onCreateContourBullEye(wxPanel* pan);
        /////////////////////////////////
        void onDeleteContour();
@@ -203,6 +222,7 @@ class wxContourMainFrame : public wxPanel {
        void onUndo();
        void onRedo();
        void createCopyContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
+       void createMirrorContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
 ///////////////////////7
        void onLoad();
        void onSave();
@@ -215,14 +235,28 @@ class wxContourMainFrame : public wxPanel {
 
        void onSegmentationOneSlice(int isovalue,int sampling,int method);
 
+       void onSegmentationOneSliceITK(wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
+
        void SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method );
 
+       void SegmentationOneSliceITK(int x, int y, int z, wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
+
+       void Mirror( int x, int y, int z, int isovalue, int sampling, int method );
+
        int GetImageDataSizeZ();
 
        void GetImageDataRange(double *range);
 
        void onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method);
 
+       //AD
+       void referenceLine();
+       void refLineHide();
+       void refLineShow();
+
+       //AD
+       void onMirror();
+
        void showAxis(bool show);
 
        void onRigidPressed();
@@ -258,6 +292,9 @@ class wxContourMainFrame : public wxPanel {
 
        void onChangeInstantInstantPanel(std::string name,int value, int minshow, int maxshow);
 
+       void onSnakePressed();
+
+       void saveFileWithContoursAutomatique();
 private:
        //------------------------------------------------------------------------------------------------------------
        //  Private methods
@@ -273,6 +310,14 @@ private:
 
        wxContourViewPanel* _theViewPanel;
 
+       wxInstantChooserPanel * _instantPanel;
+
+       //AD: 03-09: This attributes represents the reference line that is going to be used for the mirroring
+       manualLineControler             * _refLineControl;
+       manualContourModelLine  * _refLineModel;
+       manualViewLine                  * _refLineView;
+
+
 
        wxAuiManager m_mgr;
     /*
@@ -285,25 +330,25 @@ private:
 
        //OutlineModelManager * _modelManager;
 
-       wxInstantChooserPanel * _instantPanel;
+       
 
-       wxContour_ButtonsBar * _buttonsBar;
+       //wxContour_ButtonsBar * _buttonsBar;
 
-       wxContour_Grid *  _gridPanel;
+       //wxContour_Grid *  _gridPanel;
 
-       wxContour_DrawToolsPanel * _drawToolsPanel;
+       //wxContour_DrawToolsPanel * _drawToolsPanel;
 
-       wxContour_OperationsToolsPanel * _operationsToolsPanel;
+       //wxContour_OperationsToolsPanel * _operationsToolsPanel;
 
-       wxContour_AutomaticFormsToolsPanel * _autoFormsPanel; 
+       //wxContour_AutomaticFormsToolsPanel * _autoFormsPanel; 
 
-       wxContour_StandardToolsPanel *_standardToolsPanel;
+       //wxContour_StandardToolsPanel *_standardToolsPanel;
 
-       wxContour_EdtionToolsPanel * _editionToolsPanel;
+       //wxContour_EdtionToolsPanel * _editionToolsPanel;
 
-       wxContour_ListViewPanel * _listViewPanel;
+       //wxContour_ListViewPanel * _listViewPanel;
 
-       wxVtkBaseView_SceneManager * _sceneManager;
+       //wxVtkBaseView_SceneManager * _sceneManager;
 
        //Instant * _actualInstant;