+++ /dev/null
-#include <cpPlugins/Plugins/ImageSeriesReader.h>
-#include <cpPlugins/Interface/Image.h>
-
-#include <set>
-#include <sstream>
-
-#include <itkImageSeriesReader.h>
-
-#define ITK_MANUAL_INSTANTIATION
-#include <itkImage.h>
-#include <itkRGBPixel.h>
-
-// -------------------------------------------------------------------------
-std::string cpPlugins::Plugins::ImageSeriesReader::
-GetClassName( ) const
-{
- return( "cpPlugins::Plugins::ImageSeriesReader" );
-}
-
-// -------------------------------------------------------------------------
-cpPlugins::Plugins::ImageSeriesReader::
-ImageSeriesReader( )
- : Superclass( )
-{
- this->SetNumberOfOutputs( 1 );
- this->_MakeOutput< cpPlugins::Interface::Image >( 0 );
-
- using namespace cpPlugins::Interface;
- this->m_DefaultParameters.Configure( Parameters::StringList, "FileNames" );
- this->m_DefaultParameters.Configure( Parameters::String, "PixelType" );
- this->m_DefaultParameters.Configure( Parameters::Uint, "Dimension" );
- this->m_DefaultParameters.Configure( Parameters::Uint, "IsColorImage" );
- this->m_DefaultParameters.SetValueAsString( "PixelType", "uchar" );
- this->m_DefaultParameters.SetValueAsUint( "Dimension", 3 );
- this->m_DefaultParameters.SetValueAsUint( "IsColorImage", 0 );
- this->m_Parameters = this->m_DefaultParameters;
-}
-
-// -------------------------------------------------------------------------
-cpPlugins::Plugins::ImageSeriesReader::
-~ImageSeriesReader( )
-{
-}
-
-// -------------------------------------------------------------------------
-std::string cpPlugins::Plugins::ImageSeriesReader::
-_GenerateData( )
-{
- using namespace cpPlugins::Interface;
- Parameters::TUint dim = this->m_Parameters.GetValueAsUint( "Dimension" );
-
- std::string r = "cpPlugins::Plugins::ImageSeriesReader: itk::Image dimension not supported.";
- if ( dim == 2 ) r = this->_GD0< 2 >( );
- else if( dim == 3 ) r = this->_GD0< 3 >( );
- else if( dim == 4 ) r = this->_GD0< 4 >( );
-
- return( r );
-}
-
-// -------------------------------------------------------------------------
-template< unsigned int D >
-std::string cpPlugins::Plugins::ImageSeriesReader::
-_GD0( )
-{
- using namespace cpPlugins::Interface;
- Parameters::TString pt = this->m_Parameters.GetValueAsString( "PixelType" );
- Parameters::TUint ci = this->m_Parameters.GetValueAsUint( "IsColorImage" );
-
- std::string r = "cpPlugins::Plugins::ImageSeriesReader: itk::Image pixel type not supported";
- if( ci == 0 )
- {
- if( pt == "char" )
- r = this->_GD1< char, D >( );
- else if( pt == "short" )
- r = this->_GD1< short, D >( );
- else if( pt == "int" )
- r = this->_GD1< int, D >( );
- else if( pt == "long" )
- r = this->_GD1< long, D >( );
- else if( pt == "uchar" )
- r = this->_GD1< unsigned char, D >( );
- else if( pt == "ushort" )
- r = this->_GD1< unsigned short, D >( );
- else if( pt == "uint" )
- r = this->_GD1< unsigned int, D >( );
- else if( pt == "ulong" )
- r = this->_GD1< unsigned long, D >( );
- else if( pt == "float" )
- r = this->_GD1< float, D >( );
- else if( pt == "double" )
- r = this->_GD1< double, D >( );
- }
- else if( ci == 1 )
- {
- if( pt == "char" )
- r = this->_GD1< itk::RGBPixel< char >, D >( );
- else if( pt == "short" )
- r = this->_GD1< itk::RGBPixel< short >, D >( );
- else if( pt == "int" )
- r = this->_GD1< itk::RGBPixel< int >, D >( );
- else if( pt == "long" )
- r = this->_GD1< itk::RGBPixel< long >, D >( );
- else if( pt == "uchar" )
- r = this->_GD1< itk::RGBPixel< unsigned char >, D >( );
- else if( pt == "ushort" )
- r = this->_GD1< itk::RGBPixel< unsigned short >, D >( );
- else if( pt == "uint" )
- r = this->_GD1< itk::RGBPixel< unsigned int >, D >( );
- else if( pt == "ulong" )
- r = this->_GD1< itk::RGBPixel< unsigned long >, D >( );
- else if( pt == "float" )
- r = this->_GD1< itk::RGBPixel< float >, D >( );
- else if( pt == "double" )
- r = this->_GD1< itk::RGBPixel< double >, D >( );
- } // fi
- return( r );
-}
-
-// -------------------------------------------------------------------------
-template< class P, unsigned int D >
-std::string cpPlugins::Plugins::ImageSeriesReader::
-_GD1( )
-{
- using namespace cpPlugins::Interface;
- std::vector< Parameters::TString > unordered_names;
- this->m_Parameters.GetValueAsStringList( unordered_names, "FileNames" );
- std::set< std::string > ordered_names;
- for( unsigned int i = 0; i < unordered_names.size( ); ++i )
- ordered_names.insert( unordered_names[ i ] );
-
- // Reader
- typedef itk::Image< P, D > _TImage;
- typedef itk::ImageSeriesReader< _TImage > _TReader;
-
- _TReader* reader =
- dynamic_cast< _TReader* >( this->m_RealProcessObject.GetPointer( ) );
- if( reader == NULL )
- {
- this->m_RealProcessObject = _TReader::New( );
- reader =
- dynamic_cast< _TReader* >( this->m_RealProcessObject.GetPointer( ) );
-
- } // fi
- std::set< std::string >::const_iterator fnIt = ordered_names.begin( );
- for( ; fnIt != ordered_names.end( ); ++fnIt )
- reader->AddFileName( *fnIt );
- try
- {
- reader->Update( );
- }
- catch( itk::ExceptionObject& err )
- {
- return( err.GetDescription( ) );
-
- } // yrt
- this->_SetOutput( 0, reader->GetOutput( ) );
- return( "" );
-}
-
-// eof - $RCSfile$