Feature #1772 Add licence terms for all files.

[creaContours.git] / lib / kernel_ManagerContour_NDimensions / ParserOsirix / OsirixParser.cxx

diff --git a/lib/kernel_ManagerContour_NDimensions/ParserOsirix/OsirixParser.cxx b/lib/kernel_ManagerContour_NDimensions/ParserOsirix/OsirixParser.cxx
index b913b5b3900985c6a0133fbdaf3d60462beaef22..03d34261aed9dd5038963afc0b3d0121f7043c92 100644 (file)
--- a/lib/kernel_ManagerContour_NDimensions/ParserOsirix/OsirixParser.cxx
+++ b/lib/kernel_ManagerContour_NDimensions/ParserOsirix/OsirixParser.cxx
@@ -1,9 +1,33 @@
+/*# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+#                        pour la Sant�)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+# Previous Authors : Laurent Guigues, Jean-Pierre Roux
+# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+#
+#  This software is governed by the CeCILL-B license under French law and
+#  abiding by the rules of distribution of free software. You can  use,
+#  modify and/ or redistribute the software under the terms of the CeCILL-B
+#  license as circulated by CEA, CNRS and INRIA at the following URL
+#  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+#  or in the file LICENSE.txt.
+#
+#  As a counterpart to the access to the source code and  rights to copy,
+#  modify and redistribute granted by the license, users are provided only
+#  with a limited warranty  and the software's author,  the holder of the
+#  economic rights,  and the successive licensors  have only  limited
+#  liability.
+#
+#  The fact that you are presently reading this means that you have had
+#  knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------ */
+
 
 //----------------------------------------------------------------------------------------------------------------
 // Class definition include
 //----------------------------------------------------------------------------------------------------------------
 #include "OsirixParser.h"
-
 #include <stdio.h>
 
 
@@ -22,6 +46,7 @@ OsirixParser::OsirixParser(std::string xsdfile, double* spacing, int* extent)
        OSIRIX_POINT_MM = "Point_mm";
        OSIRIX_POINT_PX = "Point_px";
        OSIRIX_STRING = "string";
+       OSIRIX_NAME = "Name";
 
        if(spacing != NULL){
                _spacing[0] = spacing[0];
@@ -65,6 +90,7 @@ OsirixParser::OsirixParser(std::string xsdfile, double* spacing, int* extent)
        /*STATICCONTOURS*/
        CREACONTOUR_NUMBEROFCONTOURSSTATIC = "NumberOfContoursStatic";
 
+        TEMPIMPORTOSIRIXFILE = "";
 
 #ifdef WIN32
 
@@ -77,7 +103,15 @@ OsirixParser::OsirixParser(std::string xsdfile, double* spacing, int* extent)
        TEMPIMPORTOSIRIXFILE.append("\\data\\TEMPIMPORTOSIRIXFILE.roi");
        
 #else
-       TEMPIMPORTOSIRIXFILE = "./data/TEMPIMPORTOSIRIXFILE";
+        char * pPath;
+        pPath = getenv ("HOME");
+
+        if(pPath){
+            TEMPIMPORTOSIRIXFILE.append(pPath);
+        }else{
+            TEMPIMPORTOSIRIXFILE.append(".");
+        }
+        TEMPIMPORTOSIRIXFILE.append("/.creaContourDataTemp/TEMPIMPORTOSIRIXFILE.roi");
 #endif
        
 }
@@ -223,6 +257,8 @@ void OsirixParser::parseOSIRIX_DICT(DOMNodeList* list){
        imageindex = OSIRIX_IMAGEINDEX;
        osirixinteger = OSIRIX_INTEGER;
        
+       std::string osirixstring = OSIRIX_STRING;
+       std::string osirixname = OSIRIX_NAME;
        
 
        for(i = 0; i < (int)(list->getLength()); i++){
@@ -250,6 +286,13 @@ void OsirixParser::parseOSIRIX_DICT(DOMNodeList* list){
                                if(childnode1 != NULL && osirixinteger.compare(XMLString::transcode(childnode1->getNodeName())) == 0){
                                        _imageindex = atoi(XMLString::transcode(childnode1->getTextContent()));                                         
                                }                               
+                       } else if(osirixname.compare(temp) == 0) {
+                         // keep information about the name of the ROI
+                               childnode1 = childlist->item(j+2);
+                               if(childnode1 != NULL && osirixstring.compare(XMLString::transcode(childnode1->getNodeName())) == 0){
+                                 char* roiname = XMLString::transcode(childnode1->getTextContent());
+                                 _roiname = string(roiname);
+                               }
                        }
                }               
        }
@@ -299,6 +342,7 @@ void OsirixParser::parseOSIRIX_POINT_MM(DOMNodeList* list){
                vectorxyz.push_back(*vectory);
                vectorxyz.push_back(*vectorz);
                contoursmapMM.insert(pair<int, vectorXYZ>(contoursmapMM.size(), vectorxyz));
+               contoursnameMM.insert(pair<int, string>(contoursnameMM.size(), _roiname));
        }
 }
 
@@ -342,6 +386,7 @@ void OsirixParser::parseOSIRIX_POINT_PX(DOMNodeList* list){
                vectorxyz.push_back(*vectory);  
                vectorxyz.push_back(*vectorz);  
                contoursmapPX.insert(pair<int, vectorXYZ>(contoursmapPX.size(), vectorxyz));
+               contoursnamePX.insert(pair<int, string>(contoursnamePX.size(), _roiname));
        }       
 }
                
@@ -411,7 +456,8 @@ void OsirixParser::writeContours(FILE* pFile){
                        fprintf(pFile, CREACONTOUR_NUMBEROFCONTROLPOINTS);
                        fprintf(pFile, " %d\n", vectz.size());
                        for(i = 0; i < vectx.size(); i++){
-                               fprintf(pFile, "%f %f 900.00\n", vectx[i]/ _spacing[0],dimy - vecty[i]/ _spacing[1]);
+                         fprintf(pFile, "%f %f 900.00\n", vectx[i]/ _spacing[0], dimy - vecty[i]/ _spacing[1]);
+                         // fprintf(pFile, "%f %f %f\n", vectx[i] , vecty[i], vectz[i]);
                        }               
                        fprintf(pFile, CREACONTOUR_TYPEVIEW);
                        fprintf(pFile, " 1\n");