-/*=========================================================================
+/*
+ # ---------------------------------------------------------------------
+ #
+ # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+ # pour la SantÈ)
+ # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+ # Previous Authors : Laurent Guigues, Jean-Pierre Roux
+ # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+ #
+ # This software is governed by the CeCILL-B license under French law and
+ # abiding by the rules of distribution of free software. You can use,
+ # modify and/ or redistribute the software under the terms of the CeCILL-B
+ # license as circulated by CEA, CNRS and INRIA at the following URL
+ # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+ # or in the file LICENSE.txt.
+ #
+ # As a counterpart to the access to the source code and rights to copy,
+ # modify and redistribute granted by the license, users are provided only
+ # with a limited warranty and the software's author, the holder of the
+ # economic rights, and the successive licensors have only limited
+ # liability.
+ #
+ # The fact that you are presently reading this means that you have had
+ # knowledge of the CeCILL-B license and that you accept its terms.
+ # ------------------------------------------------------------------------ */
+
+
+/*=========================================================================
Program: bbtk
Module: $RCSfile: bbitkImageProperties.cxx,v $
Language: C++
- Date: $Date: 2010/04/08 14:35:03 $
- Version: $Revision: 1.11 $
+ Date: $Date: 2012/11/16 08:50:39 $
+ Version: $Revision: 1.16 $
=========================================================================*/
-/* ---------------------------------------------------------------------
-
-* Copyright (c) CREATIS-LRMN (Centre de Recherche en Imagerie Medicale)
-* Authors : Eduardo Davila, Laurent Guigues, Jean-Pierre Roux
-*
-* This software is governed by the CeCILL-B license under French law and
-* abiding by the rules of distribution of free software. You can use,
-* modify and/ or redistribute the software under the terms of the CeCILL-B
-* license as circulated by CEA, CNRS and INRIA at the following URL
-* http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-* or in the file LICENSE.txt.
-*
-* As a counterpart to the access to the source code and rights to copy,
-* modify and redistribute granted by the license, users are provided only
-* with a limited warranty and the software's author, the holder of the
-* economic rights, and the successive licensors have only limited
-* liability.
-*
-* The fact that you are presently reading this means that you have had
-* knowledge of the CeCILL-B license and that you accept its terms.
-* ------------------------------------------------------------------------ */
+
/**
* \file
#include "bbitkImageProperties.h"
#include "bbitkPackage.h"
+#include "itkMinimumMaximumImageFilter.h"
namespace bbitk
{
//-----------------------------------------------------------------
void ImageProperties::bbUserSetDefaultValues()
{
- std::cout <<
- "==============================================================ImageProperties::bbUserSetDefaultValues()"
- << std::endl;
}
//-----------------------------------------------------------------
void ImageProperties::bbUserInitializeProcessing()
{
- std::cout <<
- "==============================================================ImageProperties::bbUserInitializeProcessing()"
- << std::endl;
}
//-----------------------------------------------------------------
void ImageProperties::bbUserFinalizeProcessing()
{
- std::cout <<
- "==============================================================ImageProperties::bbUserFinalizeProcessing()"
- << std::endl;
}
void ImageProperties::DoIt()
{
+ printf("EED ImageProperties::DoIt Start \n");
BBTK_TEMPLATE_ITK_IMAGE_SWITCH(bbGetInputIn().type(),DoIt);
+ printf("EED ImageProperties::DoIt End \n");
}
/**
template<class itkImageType>
void ImageProperties::DoIt()
{
+ printf("EED <template>ImageProperties::DoIt Start \n");
bbtkDebugMessageInc("Core",9,"bbitk::ImageProperties::DoIt<"
<<bbtk::TypeName<itkImageType>()
<<">()"<<std::endl);
itkImageType* im = bbGetInputIn().get<itkImageType*>();
+
+ printf("EED <template>ImageProperties::DoIt 1 \n");
+
unsigned int dim = im->GetImageDimension();
+
bbSetOutputTypeName(bbtk::TypeName<typename itkImageType::PixelType>());
bbSetOutputDimension(dim);
const typename itkImageType::RegionType& r =im->GetLargestPossibleRegion();
bbSetOutputLargestPossibleRegion(r);
+ printf("EED <template>ImageProperties::DoIt 2 \n");
+
const typename itkImageType::IndexType& ind = r.GetIndex();
std::vector<int> vind;
for (unsigned int i=0;i<dim;++i)
std::vector<int> vsz;
for (unsigned int i=0;i<dim;++i)
vsz.push_back(sz[i]);
-
+
+ printf("EED <template>ImageProperties::DoIt 3 \n");
+
// brute hack to avoid failure of most black boxes that expects 3D images. // JPR
if (dim==2)
vsz.push_back(1);
bbSetOutputSize(vsz);
+
+ const typename itkImageType::PointType& orgn = im->GetOrigin();
+ std::vector<float> vog;
+ for (unsigned int i=0;i<dim;++i)
+ vog.push_back(orgn[i]);
+
+ // brute hack to avoid failure of most black boxes that expects 3D images. // EC
+ if (dim==2)
+ vog.push_back(1.0);
+
+ bbSetOutputOrigin(vog);
+ printf("EED <template>ImageProperties::DoIt 4 \n");
typename itkImageType::SpacingType sp = im->GetSpacing();
- std::vector<float> vsp;
+ std::vector<double> vsp;
for (unsigned int i=0;i<dim;++i)
- vsp.push_back(sp[i]);
+ vsp.push_back(double(sp[i]));
// brute hack to avoid failure of most black boxes that expects 3D images. // JPR
if (dim==2)
bbSetOutputSpacing(vsp);
+
+ // Min Max Value // EED
+ std::vector<float> vminmax;
+ typedef itk::MinimumMaximumImageFilter< itkImageType > MinMaxFilterType;
+ typename MinMaxFilterType::Pointer minMaxCalculator = MinMaxFilterType::New();
+ minMaxCalculator->SetInput(im);
+ minMaxCalculator->Update();
+ vminmax.push_back( (float) (minMaxCalculator->GetMinimum()) );
+ vminmax.push_back( (float) (minMaxCalculator->GetMaximum()) );
+ bbSetOutputMinMax(vminmax);
+
+ printf("EED <template>ImageProperties::DoIt 5 \n");
+
+
bbtkDebugDecTab("Core",9);
+ printf("EED <template>ImageProperties::DoIt End \n");
}
-}
-// eo namespace bbtk
+
+
+} // eo namespace bbtk
#endif