(try to) fix trouble when file name contains space(s)

[bbtk.git] / packages / itk / src / bbitkImageSeriesReader.cxx

diff --git a/packages/itk/src/bbitkImageSeriesReader.cxx b/packages/itk/src/bbitkImageSeriesReader.cxx
index d182265656bb632c164995e5fcadd40d1ae11f34..0d6b35eefcd687cc9aa1cc24f7db17b22b55af1f 100644 (file)
--- a/packages/itk/src/bbitkImageSeriesReader.cxx
+++ b/packages/itk/src/bbitkImageSeriesReader.cxx
@@ -2,8 +2,8 @@
   Program:   bbtk
   Module:    $RCSfile: bbitkImageSeriesReader.cxx,v $
   Language:  C++
-  Date:      $Date: 2009/05/15 14:57:58 $
-  Version:   $Revision: 1.9 $
+  Date:      $Date: 2009/06/24 08:08:57 $
+  Version:   $Revision: 1.10 $
 =========================================================================*/
 
 /* ---------------------------------------------------------------------
@@ -67,6 +67,7 @@ namespace bbitk
        
   void ImageSeriesReader::Read()
   {
+std::cout << "--------------------------------------------------- ImageSeriesReader::Read( NO template)" << std::endl;
     const std::vector<std::string>& filenames = bbGetInputFileNames();
     if (!filenames.size()) 
       {
@@ -81,12 +82,16 @@ namespace bbitk
        p->Allocate();
        p->Register();
        bbSetOutputOut(p.GetPointer());
+std::cout << "--------------------------------------------------- ImageSeriesReader::Read( NO image found)" << std::endl;
        return;
        //bbtkError("Void vector passed to "<<bbGetFullName());
       }
 
     std::string filename = filenames[0];
-    
+    std::cout << "--------------------------------------------------- size " << filenames.size() << std::endl;
+std::cout << "--------------------------------------------------- filenames[0] : " << filenames[0]<< std::endl; 
+std::cout << "--------------------------------------------------- filename.c_str : " << filename.c_str()<< std::endl; 
+   
     itk::ImageIOBase::Pointer genericReader = 
       itk::ImageIOFactory::CreateImageIO(filename.c_str(), 
                                         itk::ImageIOFactory::ReadMode);
@@ -106,7 +111,6 @@ namespace bbitk
        plusUn = 0;
     
     bbtk::TypeInfo typ = GetITKImagePtrTypeInfoFromPixelTypeInfoAndDimension(genericReader->GetComponentTypeInfo(), genericReader->GetNumberOfDimensions() + plusUn);
-    
       
     BBTK_TEMPLATE_ITK_IMAGE_SWITCH(typ,Read);
     
@@ -118,6 +122,7 @@ namespace bbitk
   template<class T>
   void ImageSeriesReader::Read()
   {
+std::cout << "--------------------------------------------------- ImageSeriesReader::Read()" << std::endl;
     bbtkDebugMessageInc("Core",9,"bbitk::ImageSeriesReader<"
                        <<bbtk::TypeName<T>()
                        <<">::Read()"<<std::endl);
@@ -127,7 +132,13 @@ namespace bbitk
 
     typename itkReaderType::Pointer reader = itkReaderType::New();
     const std::vector<std::string>& filenames = bbGetInputFileNames();
-    reader->SetFileNames(filenames);
+    
+std::cout << "--------------------------------------------------- size " << filenames.size() << std::endl;
+       for (int i = 0; i< filenames.size(); i++)
+       std::cout << "-- [" <<filenames[i] << "]" << std::endl;
+       
+    reader->SetFileNames(filenames);    
+
     try { reader->Update(); }
     catch( std::exception& e ) 
       {
@@ -143,16 +154,19 @@ namespace bbitk
        spacingToBeSet = true;
        spacingJPRx[0]= bbGetInputXSpacing();
     }
+
     if (bbGetInputYSpacing() > 0.)
     {
        spacingToBeSet = true;
        spacingJPRx[1]= bbGetInputYSpacing();
     }
+
     if (bbGetInputZSpacing() > 0.)
     {
        spacingToBeSet = true;
        spacingJPRx[2]= bbGetInputZSpacing();
     }
+
     if (spacingToBeSet)
        reader->GetOutput()->SetSpacing(spacingJPRx);   
     // JPRx 
@@ -164,7 +178,6 @@ namespace bbitk
     bbtkDebugDecTab("Core",9);
   }
 
-
 }
 // eo namespace bbtk