Clean code

[bbtk.git] / packages / vtk / src / bbvtkSegmentationConnectivity.cxx

diff --git a/packages/vtk/src/bbvtkSegmentationConnectivity.cxx b/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
index 1f2758ead003fea3faa4a506297d3f0e9a154968..b5b028da31e1434bfc0f9c142af3c3ba245b4626 100644 (file)
--- a/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
+++ b/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
@@ -67,7 +67,7 @@ namespace bbvtk
          bbSetInputPositionXYZ(position);
          std::vector<int> threshold;
          threshold.push_back(0);
-         threshold.push_back(0);
+         threshold.push_back(1);
          bbSetInputThresholdMinMax(threshold);
          bbSetOutputOut(NULL);
          bbSetInputOutputFormat("SAME");
@@ -128,12 +128,20 @@ namespace bbvtk
 // --------------------------------------------------------------
   void SegmentationConnectivity::DoProcess()
   {
+      
+      printf("EED (%s) SegmentationConnectivity::DoProcess Start \n", bbGetFullName().c_str() );
        int x,y,z;
        int i,numPoints = bbGetInputPositionXYZ().size()/3;
        int verif = (bbGetInputPositionXYZ().size()-1) % 3;
        if (( numPoints>=1) && (verif==2) && (bbGetInputIn()!=NULL)) 
        {
+        printf("EED  SegmentationConnectivity::DoProcess 1 format=%s %p\n", bbGetInputOutputFormat().c_str() , bbGetInputIn()  );
+        printf("EED  SegmentationConnectivity::DoProcess 1.1 \n" );
+
+//EED 2020-01-18
                int outputformat = bbtkStaticLecture::GetTypeFormat( bbGetInputOutputFormat() , bbGetInputIn() );
+//        int outputformat=4;
+        printf("EED  SegmentationConnectivity::DoProcess 2 \n" );
                vtkImageData *imagedata = bbGetInputIn();
 //EED 2017-01-01 Migration VTK7
 #if VTK_MAJOR_VERSION <= 5
@@ -145,6 +153,7 @@ namespace bbvtk
 //             imagedata->SetExtent(imagedata->GetExtent());
                thresh2->SetInputData(imagedata);
 #endif
+        printf("EED SegmentationConnectivity::DoProcess 3  Threshold= %f %f\n", bbGetInputThresholdMinMax()[0], bbGetInputThresholdMinMax()[1] );
                thresh2->ThresholdBetween(bbGetInputThresholdMinMax()[0], bbGetInputThresholdMinMax()[1]);
                thresh2->Update();
                connect2->RemoveAllSeeds ();
@@ -158,28 +167,38 @@ namespace bbvtk
                int maxX = ext[1]-ext[0]+1;
                int maxY = ext[3]-ext[2]+1;
                int maxZ = ext[5]-ext[4]+1;
+        printf("EED SegmentationConnectivity::DoProcess 4 numPoints=%d\n",numPoints );
                for (i=0;i<numPoints;i++)
                {
-                       x=bbGetInputPositionXYZ()[i*3+0];
-                       y=bbGetInputPositionXYZ()[i*3+1];
-                       z=bbGetInputPositionXYZ()[i*3+2];
+                       x = bbGetInputPositionXYZ()[i*3+0];
+                       y = bbGetInputPositionXYZ()[i*3+1];
+                       z = bbGetInputPositionXYZ()[i*3+2];
                        if ( (x>=0) || (x<maxX) || (y>=0) || (y<maxY) || (z>=0) || (z<maxZ) )
                        {
+                printf("EED  SegmentationConnectivity::DoProcess 4.1 xyz=%d %d %d\n",x,y,z );
                                connect2->AddSeed( x,y,z );
                        } else {
                                printf("EED WARNNIG! In box: SegmentationConnectivity points list out of range \n");
                        } // if point inside image 
                } // for i
+        printf("EED  SegmentationConnectivity::DoProcess 4.2 \n" );
                connect2->SetOutputConnectedValue( bbGetInputValue() );
+        printf("EED  SegmentationConnectivity::DoProcess 4.3 \n" );
                cast4->SetOutputScalarType( outputformat );
+        printf("EED  SegmentationConnectivity::DoProcess 4.5 \n" );
                connect2->Modified();
+        printf("EED  SegmentationConnectivity::DoProcess 5 \n" );
                connect2->Update();
                cast4->Update();                        
+        printf("EED SegmentationConnectivity::DoProcess 6 \n" );
                bbSetOutputOut(cast4->GetOutput() );
        }  else {
                printf("EED WARNNIG! In box: SegmentationConnectivity List of points are not coherent. \n");
                bbSetOutputOut( NULL );
        }// if numPoints verif
+      
+      printf("EED SegmentationConnectivity::DoProcess End \n" );
+
 }
   
 }// EO namespace bbvtk