#3467 Bug: InvertCrop Dimension of 2D or 3D

[bbtk.git] / packages / vtk / src / bbvtkSegmentationConnectivity.cxx

diff --git a/packages/vtk/src/bbvtkSegmentationConnectivity.cxx b/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
index 3b28389b314c7ba907561d6707610220205a9f43..1f2758ead003fea3faa4a506297d3f0e9a154968 100644 (file)
--- a/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
+++ b/packages/vtk/src/bbvtkSegmentationConnectivity.cxx
@@ -59,7 +59,6 @@ namespace bbvtk
 //       cast2         = NULL;
          connect2      = NULL;
          cast4         = NULL;
-               
          bbSetInputIn(NULL);
          std::vector<int> position;
          position.push_back(0);
@@ -71,53 +70,37 @@ namespace bbvtk
          threshold.push_back(0);
          bbSetInputThresholdMinMax(threshold);
          bbSetOutputOut(NULL);
-
          bbSetInputOutputFormat("SAME");
          bbSetInputValue(255);
-
-
   }
 
-// --------------------------------------------------------------
-               
+// --------------------------------------------------------------      
        void SegmentationConnectivity::bbUserInitializeProcessing()
        {
-
-               thresh2 = vtkImageThreshold::New();
-                       thresh2->SetInValue(255);
-                       thresh2->SetOutputScalarTypeToUnsignedChar();
-               connect2 = vtkImageSeedConnectivity::New();
-                       connect2->SetInput(thresh2->GetOutput());
-                       connect2->SetInputConnectValue(255);
-                       connect2->SetOutputConnectedValue( 255 );
-                       connect2->SetOutputUnconnectedValue(0);
-               cast4 = vtkImageCast::New();
-                       cast4->SetInput(connect2->GetOutput());
-
-// EED 2016 06 15
-
-/*
                thresh2 = vtkImageThreshold::New();
-                       thresh2->SetInValue(255);
-                       thresh2->SetOutputScalarTypeToUnsignedShort();
-                       thresh2->SetOutValue(0);
-               cast2 = vtkImageCast::New();
-                       cast2->SetInput(thresh2->GetOutput());
-                       cast2->SetOutputScalarTypeToUnsignedChar();
+               thresh2->SetInValue(255);
+               thresh2->SetOutValue(0);
+               thresh2->SetOutputScalarTypeToUnsignedChar();
                connect2 = vtkImageSeedConnectivity::New();
-                       connect2->SetInput(cast2->GetOutput());
-                       connect2->SetInputConnectValue(255);
-                       connect2->SetOutputConnectedValue(255);
-                       connect2->SetOutputUnconnectedValue(0);
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
+               connect2->SetInput(thresh2->GetOutput());
+#else
+               connect2->SetInputData(thresh2->GetOutput());
+#endif
+               connect2->SetInputConnectValue(255);
+               connect2->SetOutputConnectedValue( 255 );
+               connect2->SetOutputUnconnectedValue(0);
                cast4 = vtkImageCast::New();
-                       cast4->SetInput(connect2->GetOutput());
-                       cast4->SetOutputScalarTypeToUnsignedShort();
-*/
-
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
+               cast4->SetInput(connect2->GetOutput());
+#else
+               cast4->SetInputData(connect2->GetOutput());
+#endif
        }
 
-// --------------------------------------------------------------
-               
+// --------------------------------------------------------------              
   void SegmentationConnectivity::bbUserFinalizeProcessing() 
   { 
          if (thresh2!=NULL)
@@ -142,14 +125,9 @@ namespace bbvtk
          }  
   }
 
-
-
-
 // --------------------------------------------------------------
-               
   void SegmentationConnectivity::DoProcess()
   {
-         
        int x,y,z;
        int i,numPoints = bbGetInputPositionXYZ().size()/3;
        int verif = (bbGetInputPositionXYZ().size()-1) % 3;
@@ -157,22 +135,29 @@ namespace bbvtk
        {
                int outputformat = bbtkStaticLecture::GetTypeFormat( bbGetInputOutputFormat() , bbGetInputIn() );
                vtkImageData *imagedata = bbGetInputIn();
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
                imagedata->UpdateInformation();
                imagedata->SetUpdateExtent(imagedata->GetWholeExtent());
                imagedata->Update();
-               thresh2->ThresholdBetween(3000, 3001);
                thresh2->SetInput(imagedata);
+#else
+//             imagedata->SetExtent(imagedata->GetExtent());
+               thresh2->SetInputData(imagedata);
+#endif
                thresh2->ThresholdBetween(bbGetInputThresholdMinMax()[0], bbGetInputThresholdMinMax()[1]);
-               thresh2->Modified();
                thresh2->Update();
                connect2->RemoveAllSeeds ();
-
                int ext[6];
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
                imagedata->GetWholeExtent(ext);
+#else
+               imagedata->GetExtent(ext);
+#endif
                int maxX = ext[1]-ext[0]+1;
                int maxY = ext[3]-ext[2]+1;
                int maxZ = ext[5]-ext[4]+1;
-
                for (i=0;i<numPoints;i++)
                {
                        x=bbGetInputPositionXYZ()[i*3+0];
@@ -182,9 +167,8 @@ namespace bbvtk
                        {
                                connect2->AddSeed( x,y,z );
                        } else {
-                               printf("EED WARNNIG! In box: SegmentationConnectivity point out of range \n");
+                               printf("EED WARNNIG! In box: SegmentationConnectivity points list out of range \n");
                        } // if point inside image 
-
                } // for i
                connect2->SetOutputConnectedValue( bbGetInputValue() );
                cast4->SetOutputScalarType( outputformat );
@@ -196,9 +180,7 @@ namespace bbvtk
                printf("EED WARNNIG! In box: SegmentationConnectivity List of points are not coherent. \n");
                bbSetOutputOut( NULL );
        }// if numPoints verif
-
 }
-
   
 }// EO namespace bbvtk