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Remove clitkBSplineDeformableRegistration from CMakeLists also...
[clitk.git] / registration / CMakeLists.txt
diff --git a/registration/CMakeLists.txt b/registration/CMakeLists.txt
index a3a231831444b8bd7ef160ea03d5f7f94431988d..39ebae893effbc57023028c71c08b16dfdcf5e9f 100644 (file)
--- a/registration/CMakeLists.txt
+++ b/registration/CMakeLists.txt
@@ -1,59 +1,90 @@
-############################## registration algorithms
+#ADD_LIBRARY(clitkLBGSB STATIC clitkLBGSBOptimizer.cxx)
+#=========================================================
 
+INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
+
+#=========================================================
+
+# Add Libraries used in vv and clitk to avoid recompilation
 WRAP_GGO(clitkAffineRegistration_GGO_C clitkAffineRegistration.ggo)
-ADD_EXECUTABLE(clitkAffineRegistration clitkAffineRegistration.cxx clitkAffineRegistrationGenericFilter.cxx ${clitkAffineRegistration_GGO_C} clitkLBFGSBOptimizer.cxx clitkGenericAffineTransform.cxx)
-TARGET_LINK_LIBRARIES(clitkAffineRegistration clitkCommon ITKIO ITKNumerics ITKStatistics)
+ADD_LIBRARY(clitkAffineRegistrationLib 
+            clitkAffineRegistrationGenericFilter.cxx
+            ${clitkAffineRegistration_GGO_C}
+            clitkLBFGSBOptimizer.cxx
+            clitkGenericAffineTransform.cxx)
+
+#=========================================================
+
+IF(CLITK_BUILD_REGISTRATION)
+    ############################## registration algorithms
+    ADD_EXECUTABLE(clitkAffineRegistration clitkAffineRegistration.cxx)
+    TARGET_LINK_LIBRARIES(clitkAffineRegistration  clitkAffineRegistrationLib clitkCommon ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL clitkAffineRegistration)
+
+    WRAP_GGO(clitkDemonsDeformableRegistration_GGO_C clitkDemonsDeformableRegistration.ggo)
+    ADD_EXECUTABLE(clitkDemonsDeformableRegistration clitkDemonsDeformableRegistration.cxx ${clitkDemonsDeformableRegistration_GGO_C} clitkDemonsDeformableRegistrationGenericFilter.cxx)
+    TARGET_LINK_LIBRARIES(clitkDemonsDeformableRegistration ${ITK_LIBRARIES} clitkCommon)
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkDemonsDeformableRegistration)
+
+    WRAP_GGO(clitkBLUTDIR_GGO_C clitkBLUTDIR.ggo)
+    ADD_EXECUTABLE(clitkBLUTDIR  clitkBLUTDIR.cxx clitkBLUTDIRGenericFilter.cxx ${clitkBLUTDIR_GGO_C} clitkLBFGSBOptimizer.cxx )
+    TARGET_LINK_LIBRARIES(clitkBLUTDIR clitkCommon ${ITK_LIBRARIES} )
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkBLUTDIR)
 
-WRAP_GGO(clitkDemonsDeformableRegistration_GGO_C clitkDemonsDeformableRegistration.ggo)
-ADD_EXECUTABLE(clitkDemonsDeformableRegistration clitkDemonsDeformableRegistration.cxx ${clitkDemonsDeformableRegistration_GGO_C} clitkDemonsDeformableRegistrationGenericFilter.cxx)
-TARGET_LINK_LIBRARIES(clitkDemonsDeformableRegistration ITKNumerics ITKIO clitkCommon)
+    WRAP_GGO(clitkShapedBLUTSpatioTemporalDIR_GGO_C clitkShapedBLUTSpatioTemporalDIR.ggo)
+    ADD_EXECUTABLE(clitkShapedBLUTSpatioTemporalDIR  clitkShapedBLUTSpatioTemporalDIR.cxx clitkShapedBLUTSpatioTemporalDIRGenericFilter.cxx  ${clitkShapedBLUTSpatioTemporalDIR_GGO_C} clitkLBFGSBOptimizer.cxx)
+    TARGET_LINK_LIBRARIES(clitkShapedBLUTSpatioTemporalDIR clitkCommon ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkShapedBLUTSpatioTemporalDIR)
 
-WRAP_GGO(clitkBLUTDIR_GGO_C clitkBLUTDIR.ggo)
-ADD_EXECUTABLE(clitkBLUTDIR  clitkBLUTDIR.cxx clitkBLUTDIRGenericFilter.cxx ${clitkBLUTDIR_GGO_C} clitkLBFGSBOptimizer.cxx )
-TARGET_LINK_LIBRARIES(clitkBLUTDIR clitkCommon ITKIO ITKNumerics ITKStatistics)
 
-WRAP_GGO(clitkShapedBLUTSpatioTemporalDIR_GGO_C clitkShapedBLUTSpatioTemporalDIR.ggo)
-ADD_EXECUTABLE(clitkShapedBLUTSpatioTemporalDIR  clitkShapedBLUTSpatioTemporalDIR.cxx clitkShapedBLUTSpatioTemporalDIRGenericFilter.cxx  ${clitkShapedBLUTSpatioTemporalDIR_GGO_C} clitkLBFGSBOptimizer.cxx)
-TARGET_LINK_LIBRARIES(clitkShapedBLUTSpatioTemporalDIR clitkCommon ITKNumerics ITKStatistics ITKIO)
+    ############################## registration-related tools to process points, bsplines, vf and image pyramids
+    WRAP_GGO(clitkConvertPointList_GGO_C clitkConvertPointList.ggo)
+    ADD_EXECUTABLE(clitkConvertPointList clitkConvertPointList.cxx  ${clitkConvertPointList_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkConvertPointList ${ITK_LIBRARIES} clitkCommon )
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkConvertPointList)
 
-WRAP_GGO(clitkBSplineDeformableRegistration_GGO_C clitkBSplineDeformableRegistration.ggo)
-ADD_EXECUTABLE(clitkBSplineDeformableRegistration clitkBSplineDeformableRegistration.cxx clitkBSplineDeformableRegistrationGenericFilter.cxx  ${clitkBSplineDeformableRegistration_GGO_C} clitkLBFGSBOptimizer.cxx)
-TARGET_LINK_LIBRARIES(clitkBSplineDeformableRegistration  clitkCommon ITKNumerics ITKStatistics ITKIO)
+    WRAP_GGO(clitkSelectPoints_GGO_C clitkSelectPoints.ggo)
+    ADD_EXECUTABLE(clitkSelectPoints clitkSelectPoints.cxx clitkSelectPointsGenericFilter.cxx  ${clitkSelectPoints_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkSelectPoints clitkCommon ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkSelectPoints)
 
+    WRAP_GGO(clitkPointTrajectory_GGO_C clitkPointTrajectory.ggo)
+    ADD_EXECUTABLE(clitkPointTrajectory  clitkPointTrajectory.cxx clitkPointTrajectoryGenericFilter.cxx  ${clitkPointTrajectory_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkPointTrajectory clitkCommon ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkPointTrajectory)
 
-############################## registration-related tools to process points, bsplines, vf and image pyramids
-WRAP_GGO(clitkConvertPointList_GGO_C clitkConvertPointList.ggo)
-ADD_EXECUTABLE(clitkConvertPointList clitkConvertPointList.cxx  ${clitkConvertPointList_GGO_C})
-TARGET_LINK_LIBRARIES(clitkConvertPointList ITKIO clitkCommon )
+    WRAP_GGO(clitkCalculateTRE_GGO_C clitkCalculateTRE.ggo)
+    ADD_EXECUTABLE(clitkCalculateTRE clitkCalculateTRE.cxx clitkCalculateTREGenericFilter.cxx ${clitkCalculateTRE_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkCalculateTRE clitkCommon ${ITK_LIBRARIES} )
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkCalculateTRE)
 
-WRAP_GGO(clitkSelectPoints_GGO_C clitkSelectPoints.ggo)
-ADD_EXECUTABLE(clitkSelectPoints clitkSelectPoints.cxx clitkSelectPointsGenericFilter.cxx  ${clitkSelectPoints_GGO_C})
-TARGET_LINK_LIBRARIES(clitkSelectPoints clitkCommon ITKIO)
+    WRAP_GGO(clitkMatrixTransformToVF_GGO_C clitkMatrixTransformToVF.ggo)
+    ADD_EXECUTABLE(clitkMatrixTransformToVF clitkMatrixTransformToVF.cxx clitkMatrixTransformToVFGenericFilter.cxx  ${clitkMatrixTransformToVF_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkMatrixTransformToVF ${ITK_LIBRARIES} clitkCommon)
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkMatrixTransformToVF)
 
-WRAP_GGO(clitkPointTrajectory_GGO_C clitkPointTrajectory.ggo)
-ADD_EXECUTABLE(clitkPointTrajectory  clitkPointTrajectory.cxx clitkPointTrajectoryGenericFilter.cxx  ${clitkPointTrajectory_GGO_C})
-TARGET_LINK_LIBRARIES(clitkPointTrajectory clitkCommon ITKIO)
+    WRAP_GGO(clitkConvertBSplineDeformableTransformToVF_GGO_C clitkConvertBSplineDeformableTransformToVF.ggo)
+    ADD_EXECUTABLE(clitkConvertBSplineDeformableTransformToVF  clitkConvertBSplineDeformableTransformToVF.cxx clitkConvertBSplineDeformableTransformToVFGenericFilter.cxx  ${clitkConvertBSplineDeformableTransformToVF_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkConvertBSplineDeformableTransformToVF clitkCommon  ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkConvertBSplineDeformableTransformToVF)
 
-WRAP_GGO(clitkCalculateTRE_GGO_C clitkCalculateTRE.ggo)
-ADD_EXECUTABLE(clitkCalculateTRE clitkCalculateTRE.cxx clitkCalculateTREGenericFilter.cxx ${clitkCalculateTRE_GGO_C})
-TARGET_LINK_LIBRARIES(clitkCalculateTRE clitkCommon ITKIO )
+    WRAP_GGO(clitkMultiResolutionPyramid_GGO_C clitkMultiResolutionPyramid.ggo)
+    ADD_EXECUTABLE(clitkMultiResolutionPyramid  clitkMultiResolutionPyramid.cxx clitkMultiResolutionPyramidGenericFilter.cxx ${clitkMultiResolutionPyramid_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkMultiResolutionPyramid clitkCommon  ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkMultiResolutionPyramid)
 
-WRAP_GGO(clitkMatrixTransformToVF_GGO_C clitkMatrixTransformToVF.ggo)
-ADD_EXECUTABLE(clitkMatrixTransformToVF clitkMatrixTransformToVF.cxx clitkMatrixTransformToVFGenericFilter.cxx  ${clitkMatrixTransformToVF_GGO_C})
-TARGET_LINK_LIBRARIES(clitkMatrixTransformToVF ITKIO clitkCommon)
+    WRAP_GGO(clitkBSplinePyramid_GGO_C clitkBSplinePyramid.ggo)
+    ADD_EXECUTABLE(clitkBSplinePyramid  clitkBSplinePyramid.cxx clitkBSplinePyramidGenericFilter.cxx ${clitkBSplinePyramid_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkBSplinePyramid  clitkCommon  ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkBSplinePyramid)
 
-WRAP_GGO(clitkConvertBSplineDeformableTransformToVF_GGO_C clitkConvertBSplineDeformableTransformToVF.ggo)
-ADD_EXECUTABLE(clitkConvertBSplineDeformableTransformToVF  clitkConvertBSplineDeformableTransformToVF.cxx clitkConvertBSplineDeformableTransformToVFGenericFilter.cxx  ${clitkConvertBSplineDeformableTransformToVF_GGO_C})
-TARGET_LINK_LIBRARIES(clitkConvertBSplineDeformableTransformToVF clitkCommon  ITKIO)
+    WRAP_GGO(clitkResampleBSplineDeformableTransform_GGO_C clitkResampleBSplineDeformableTransform.ggo)
+    ADD_EXECUTABLE(clitkResampleBSplineDeformableTransform  clitkResampleBSplineDeformableTransform.cxx clitkResampleBSplineDeformableTransformGenericFilter.cxx ${clitkResampleBSplineDeformableTransform_GGO_C})
+    TARGET_LINK_LIBRARIES(clitkResampleBSplineDeformableTransform clitkCommon ${ITK_LIBRARIES})
+    SET(REGISTRATION_INSTALL ${REGISTRATION_INSTALL} clitkResampleBSplineDeformableTransform)
 
-WRAP_GGO(clitkMultiResolutionPyramid_GGO_C clitkMultiResolutionPyramid.ggo)
-ADD_EXECUTABLE(clitkMultiResolutionPyramid  clitkMultiResolutionPyramid.cxx clitkMultiResolutionPyramidGenericFilter.cxx ${clitkMultiResolutionPyramid_GGO_C})
-TARGET_LINK_LIBRARIES(clitkMultiResolutionPyramid clitkCommon  ITKIO)
+    SET_TARGET_PROPERTIES(${REGISTRATION_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" )  
+    INSTALL (TARGETS ${REGISTRATION_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
 
-WRAP_GGO(clitkBSplinePyramid_GGO_C clitkBSplinePyramid.ggo)
-ADD_EXECUTABLE(clitkBSplinePyramid  clitkBSplinePyramid.cxx clitkBSplinePyramidGenericFilter.cxx ${clitkBSplinePyramid_GGO_C})
-TARGET_LINK_LIBRARIES(clitkBSplinePyramid  clitkCommon  ITKIO)
+ENDIF(CLITK_BUILD_REGISTRATION)
 
-WRAP_GGO(clitkResampleBSplineDeformableTransform_GGO_C clitkResampleBSplineDeformableTransform.ggo)
-ADD_EXECUTABLE(clitkResampleBSplineDeformableTransform  clitkResampleBSplineDeformableTransform.cxx clitkResampleBSplineDeformableTransformGenericFilter.cxx ${clitkResampleBSplineDeformableTransform_GGO_C})
-TARGET_LINK_LIBRARIES(clitkResampleBSplineDeformableTransform clitkCommon ITKIO)
Public Command Line ITK tools and VV