Moved from repository src2 to private2/dicom_scripts/clitk

[clitk.git] / scripts / create_mhd_4D_pattern.sh

diff --git a/scripts/create_mhd_4D_pattern.sh b/scripts/create_mhd_4D_pattern.sh
deleted file mode 100755 (executable)
index 9f7896a..0000000
--- a/scripts/create_mhd_4D_pattern.sh
+++ /dev/null
@@ -1,70 +0,0 @@
-#!/bin/sh 
-
-###############################################################################
-#
-# FILE: create_mhd_pattern.sh
-# AUTHOR: Rômulo Pinho 05/08/2011
-#
-# Similar to create_mhd_4D.sh, but receives a pattern as input.
-# 
-# Example:
-# create_mhd_pattern.sh "<path>/all_my_phases_start_like_this_"
-#
-###############################################################################
-
-write_mhd_4D()
-{
-  cat $orig | sed "s/NDims = .*/NDims = 4/
-                 s/TransformMatrix = .*/TransformMatrix = 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1/
-                 /Offset/ s/.*/& 0/
-                 /CenterOfRotation/ s/.*/& 0/
-                 s/AnatomicalOrientation = .*/AnatomicalOrientation = ????/
-                 /ElementSpacing/ s/.*/& 1/
-                 /DimSize/ s/.*/& $nbph/
-                 s/ElementDataFile = .*/ElementDataFile = LIST/" > "$dirname/$file_name_4D"
-  
-  for ph in $listph
-  do
-    phase=`basename $ph`
-    echo "$phase" >> "$dirname/$file_name_4D"
-  done
-}
-
-#################################################
-# create_mhd_4D        argument : repertoire   #
-#################################################
-if [ $# -lt 1 ]
-then
-  echo "Usage: $0 PREFIX [SUFFIX]"
-  exit 1
-fi
-
-dirname=`dirname $1`
-prefix=`basename $1`
-suffix=$2
-
-nbph=0
-list_phase_file=`ls -1 $dirname/$prefix*[0-9]*$suffix.mhd`
-for ph in $list_phase_file
-do
-  if [ -e `echo $ph | sed 's/mhd/raw/'` ]
-  then
-    listph="$listph $ph"
-    nbph=$(( nbph + 1 ))
-  fi
-done
-
-nb_phase_file=`ls -1 $dirname/$prefix*[0-9]*$suffix.mhd | wc -l`
-if [ $nb_phase_file = 0 ]
-then
-  echo "Error: no phase found"
-  exit 1
-fi
-
-orig=`echo $list_phase_file | cut -f 1 -d ' '`
-listph=`echo $listph | sed 's:\.mhd:\.raw:g'`
-
-file_name_4D=`echo "${prefix}4D${suffix}.mhd"`
-
-write_mhd_4D
-echo "$dirname/$file_name_4D"