Order stations, remove debug, correct structures names

[clitk.git] / scripts / create_midP_masks-2.0.sh

diff --git a/scripts/create_midP_masks-2.0.sh b/scripts/create_midP_masks-2.0.sh
index 8a8babf8bd7f7b1c86bc907ffd48ddb5fecc43b9..f5738e0107c464a68fd0e97cba98a7e2719bd193 100755 (executable)
--- a/scripts/create_midP_masks-2.0.sh
+++ b/scripts/create_midP_masks-2.0.sh
@@ -147,7 +147,9 @@ motion_mask()
   cd $dir
     
   # import variables specific to each patient
-  source ./variables
+  if test -e ./variables; then
+    source ./variables
+  fi
 
   #set other global variables
   mask_dir="MASK-${resample_spacing}mm-$resample_algo"