itkv4 migration:

[clitk.git] / segmentation / CMakeLists.txt

diff --git a/segmentation/CMakeLists.txt b/segmentation/CMakeLists.txt
index 265985133670282b8c2970fd972d03523d146357..b3e22d2a0b84c5fb7445328bf02f5ee00d40d90e 100644 (file)
--- a/segmentation/CMakeLists.txt
+++ b/segmentation/CMakeLists.txt
@@ -19,75 +19,75 @@ ADD_LIBRARY(clitkSegmentationGgoLib
 IF(CLITK_BUILD_SEGMENTATION)
     WRAP_GGO(clitkConnectedComponentLabeling_GGO_C clitkConnectedComponentLabeling.ggo)
     ADD_EXECUTABLE(clitkConnectedComponentLabeling clitkConnectedComponentLabeling.cxx ${clitkConnectedComponentLabeling_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkConnectedComponentLabeling clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkFillMask_GGO_C clitkFillMask.ggo)
     ADD_EXECUTABLE(clitkFillMask clitkFillMask.cxx ${clitkFillMask_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkFillMask clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkFillMask clitkCommon ${ITK_LIBRARIES})
 
     ADD_EXECUTABLE(clitkExtractPatient clitkExtractPatient.cxx ${clitkExtractPatient_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ITKIO clitkSegmentationGgoLib)
+    TARGET_LINK_LIBRARIES(clitkExtractPatient clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
 
     ADD_EXECUTABLE(clitkExtractLung clitkExtractLung.cxx  ${clitkExtractLung_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkExtractLung clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
 
     # WRAP_GGO(clitkExtractAirwaysTreeInfo_GGO_C clitkExtractAirwaysTreeInfo.ggo)
     # ADD_EXECUTABLE(clitkExtractAirwaysTreeInfo clitkExtractAirwaysTreeInfo.cxx ${clitkExtractAirwaysTreeInfo_GGO_C})
-    # TARGET_LINK_LIBRARIES(clitkExtractAirwaysTreeInfo clitkSegmentationGgoLib clitkCommon ITKIO)
+    # TARGET_LINK_LIBRARIES(clitkExtractAirwaysTreeInfo clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkExtractBones_GGO_C clitkExtractBones.ggo)
     ADD_EXECUTABLE(clitkExtractBones clitkExtractBones.cxx ${clitkExtractBones_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ITKIO clitkSegmentationGgoLib)
+    TARGET_LINK_LIBRARIES(clitkExtractBones clitkCommon ${ITK_LIBRARIES} clitkSegmentationGgoLib)
 
     WRAP_GGO(clitkExtractMediastinum_GGO_C clitkExtractMediastinum.ggo)
     ADD_EXECUTABLE(clitkExtractMediastinum clitkExtractMediastinum.cxx ${clitkExtractMediastinum_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon clitkSegmentationGgoLib ITKStatistics ITKIO)
+    TARGET_LINK_LIBRARIES(clitkExtractMediastinum clitkCommon clitkSegmentationGgoLib ${ITK_LIBRARIES})
 
     # WRAP_GGO(clitkExtractLymphStations_GGO_C clitkExtractLymphStations.ggo)
     # ADD_EXECUTABLE(clitkExtractLymphStations clitkExtractLymphStations.cxx clitkFilterWithAnatomicalFeatureDatabaseManagement.cxx ${clitkExtractLymphStations_GGO_C})
-    # TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkSegmentationGgoLib clitkCommon ITKIO ITKStatistics)
+    # TARGET_LINK_LIBRARIES(clitkExtractLymphStations clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} ITKStatistics)
 
     WRAP_GGO(clitkMorphoMath_GGO_C clitkMorphoMath.ggo)
     ADD_EXECUTABLE(clitkMorphoMath clitkMorphoMath.cxx ${clitkMorphoMath_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkMorphoMath clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkMorphoReconstruction_GGO_C clitkMorphoReconstruction.ggo)
     ADD_EXECUTABLE(clitkMorphoReconstruction clitkMorphoReconstruction.cxx clitkMorphoReconstructionGenericFilter.cxx ${clitkMorphoReconstruction_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkMorphoReconstruction clitkSegmentationGgoLib clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkMorphoReconstruction clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkCalculateDistanceMap_GGO_C clitkCalculateDistanceMap.ggo)
     ADD_EXECUTABLE(clitkCalculateDistanceMap clitkCalculateDistanceMap.cxx clitkCalculateDistanceMapGenericFilter.cxx ${clitkCalculateDistanceMap_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkCalculateDistanceMap clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkCalculateDistanceMap clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkLevelSetSegmentation_GGO_C clitkLevelSetSegmentation.ggo)
     ADD_EXECUTABLE(clitkLevelSetSegmentation clitkLevelSetSegmentation.cxx clitkLevelSetSegmentationGenericFilter.cxx ${clitkLevelSetSegmentation_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkLevelSetSegmentation clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkLevelSetSegmentation clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkAnd_GGO_C clitkAnd.ggo)
     ADD_EXECUTABLE(clitkAnd clitkAnd.cxx clitkAndGenericFilter.cxx ${clitkAnd_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ITKIO )
+    TARGET_LINK_LIBRARIES(clitkAnd clitkCommon ${ITK_LIBRARIES} )
 
     WRAP_GGO(clitkRegionGrowing_GGO_C clitkRegionGrowing.ggo)
     ADD_EXECUTABLE(clitkRegionGrowing clitkRegionGrowing.cxx clitkRegionGrowingGenericFilter.cxx ${clitkRegionGrowing_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkRegionGrowing clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkDecomposeAndReconstruct_GGO_C clitkDecomposeAndReconstruct.ggo)
     ADD_EXECUTABLE(clitkDecomposeAndReconstruct clitkDecomposeAndReconstruct.cxx clitkDecomposeAndReconstructGenericFilter.cxx ${clitkDecomposeAndReconstruct_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkDecomposeAndReconstruct clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkMotionMask_GGO_C clitkMotionMask.ggo)
     ADD_EXECUTABLE(clitkMotionMask clitkMotionMask.cxx clitkMotionMaskGenericFilter.cxx ${clitkMotionMask_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ITKIO ITKStatistics )
+    TARGET_LINK_LIBRARIES(clitkMotionMask clitkCommon ${ITK_LIBRARIES})
 
     WRAP_GGO(clitkFillImageRegion_GGO_C clitkFillImageRegion.ggo)
     ADD_EXECUTABLE(clitkFillImageRegion clitkFillImageRegion.cxx clitkFillImageRegionGenericFilter.cxx ${clitkFillImageRegion_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkFillImageRegion clitkCommon ITKIO)
+    TARGET_LINK_LIBRARIES(clitkFillImageRegion clitkCommon ${ITK_LIBRARIES})
 
 ENDIF(CLITK_BUILD_SEGMENTATION)
 
 # ADD_EXECUTABLE(ScalarImageMarkovRandomField1 ScalarImageMarkovRandomField1.cxx)
-# TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ITKIO ITKStatistics)
+# TARGET_LINK_LIBRARIES(ScalarImageMarkovRandomField1 clitkCommon ${ITK_LIBRARIES} ITKStatistics)
 # ADD_EXECUTABLE(ScalarImageKmeansClassifier ScalarImageKmeansClassifier.cxx)
-# TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ITKIO ITKStatistics)
+# TARGET_LINK_LIBRARIES(ScalarImageKmeansClassifier clitkCommon ${ITK_LIBRARIES} ITKStatistics)