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[clitk.git] / segmentation / clitkConnectedComponentLabelingGenericFilter.txx

diff --git a/segmentation/clitkConnectedComponentLabelingGenericFilter.txx b/segmentation/clitkConnectedComponentLabelingGenericFilter.txx
index 33f4f3bea93e1a02c2609ebdc4199ee0d9cbce3e..89154a552c49f9b89a14078c4b63570ec29f6b32 100644 (file)
--- a/segmentation/clitkConnectedComponentLabelingGenericFilter.txx
+++ b/segmentation/clitkConnectedComponentLabelingGenericFilter.txx
@@ -3,7 +3,7 @@
 
   Authors belong to: 
   - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
+  - Léon Bérard cancer center       http://www.centreleonberard.fr
   - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
 
   This software is distributed WITHOUT ANY WARRANTY; without even
@@ -14,7 +14,7 @@
 
   - BSD        See included LICENSE.txt file
   - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-  ======================================================================-====*/
+  ===========================================================================**/
 
 #ifndef CLITKCONNECTEDCOMPONENTLABELINGSGENERICFILTER_TXX
 #define CLITKCONNECTEDCOMPONENTLABELINGSGENERICFILTER_TXX
@@ -32,7 +32,7 @@ template<class ArgsInfoType>
 clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::ConnectedComponentLabelingGenericFilter():
   ImageToImageGenericFilter<Self>("ConnectedComponentLabeling") 
 {
-  //  InitializeImageType<2>();
+  InitializeImageType<2>();
   InitializeImageType<3>();
   //InitializeImageType<4>();
 }
@@ -47,7 +47,7 @@ void clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::InitializeIma
   ADD_IMAGE_TYPE(Dim, uchar);
   ADD_IMAGE_TYPE(Dim, short);
   // ADD_IMAGE_TYPE(Dim, int);
-  // ADD_IMAGE_TYPE(Dim, float);
+  ADD_IMAGE_TYPE(Dim, float);
 }
 //--------------------------------------------------------------------
   
@@ -72,14 +72,12 @@ template<class ArgsInfoType>
 template<class ImageType>
 void clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::UpdateWithInputImageType() 
 { 
-  DD("UpdateWithInputImageType");
-
   // Reading input
   typename ImageType::Pointer input = this->template GetInput<ImageType>(0);
 
   // Output image type
   typedef itk::Image<int, ImageType::ImageDimension> OutputImageType;
-  PrintMemory(true, "initial");
+  //PrintMemory(true, "initial");
 
   typename OutputImageType::Pointer output;
   {
@@ -95,11 +93,11 @@ void clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::UpdateWithInp
       //          connectFilter->SetNumberOfThreads(8);
       connectFilter->Update();
       temp = connectFilter->GetOutput();
-      PrintMemory(true, "after udpate");
+      // PrintMemory(true, "after udpate");
     }
-    PrintMemory(true, "after CCL block");
-    DD(input->GetReferenceCount());
-    DD(temp->GetReferenceCount());
+    // PrintMemory(true, "after CCL block");
+    // DD(input->GetReferenceCount());
+    // DD(temp->GetReferenceCount());
     
     // Sort by size and remove too small area.
     typedef itk::RelabelComponentImageFilter<OutputImageType, OutputImageType> RelabelFilterType;
@@ -109,9 +107,9 @@ void clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::UpdateWithInp
     relabelFilter->SetMinimumObjectSize(mArgsInfo.minSize_arg);
     relabelFilter->Update();
     
-    DD(mArgsInfo.inputBG_arg);
-    DD(mArgsInfo.full_flag);
-    DD(mArgsInfo.minSize_arg);
+    // DD(mArgsInfo.inputBG_arg);
+    // DD(mArgsInfo.full_flag);
+    // DD(mArgsInfo.minSize_arg);
     
     // Set information
     const std::vector<typename RelabelFilterType::ObjectSizeType> & a 
@@ -120,16 +118,16 @@ void clitk::ConnectedComponentLabelingGenericFilter<ArgsInfoType>::UpdateWithInp
     for(unsigned int i=0; i<a.size(); i++) m_SizeOfObjectsInPixels[i] = a[i];
     m_SizeOfObjectsInPhysicalUnits = relabelFilter->GetSizeOfObjectsInPhysicalUnits();
     m_OriginalNumberOfObjects = relabelFilter->GetOriginalNumberOfObjects();
-    DD(m_OriginalNumberOfObjects);
-    DD(m_SizeOfObjectsInPhysicalUnits.size());
+    // DD(m_OriginalNumberOfObjects);
+    // DD(m_SizeOfObjectsInPhysicalUnits.size());
     
     output = relabelFilter->GetOutput();
   }
-  PrintMemory(true, "after block");
+  // PrintMemory(true, "after block");
 
   // Write/Save results
   this->template SetNextOutput<OutputImageType>(output); 
-  PrintMemory(true, "end filter ");
+  // PrintMemory(true, "end filter ");
 }
 //--------------------------------------------------------------------