add smooth option to extract bones

[clitk.git] / segmentation / clitkExtractBones.ggo

diff --git a/segmentation/clitkExtractBones.ggo b/segmentation/clitkExtractBones.ggo
index 581392bc57db42572263cd2dff8bc99e53a5ba2e..4938aa5639d71c303ea346c80631f947d8468bdb 100644 (file)
--- a/segmentation/clitkExtractBones.ggo
+++ b/segmentation/clitkExtractBones.ggo
@@ -17,6 +17,15 @@ option "input"               i       "Input image filename"            string        yes
 option "output"        o       "Output image filename"           string        yes
 option "like"          l       "Resample like this image"        string        no
 
+section "Smoothing (curvature anistropic diffusion)"
+
+option "smooth"                        -       "smooth input image"                    flag            off
+option "spacing"               -       "Use image spacing"                     flag            off
+option "cond"                  -       "Conductance parameter"                         double no       default="3.0"
+option "time"                  -       "Time step (0.125 for 2D and 0.0625 for 3D)"    double no       default="0.0625"
+option "iter"                  -       "Iterations"                            double no       default="5"
+
+
 section "Initial connected component labelling (CCL)"
 
 option "lower1"                        -       "Lower threshold for CCL"                       double  no default="100"