Debug RTStruct conversion with empty struc

[clitk.git] / segmentation / clitkExtractLungGenericFilter.txx

diff --git a/segmentation/clitkExtractLungGenericFilter.txx b/segmentation/clitkExtractLungGenericFilter.txx
index 1fbb5c04ba41c611bbb9a3de8f138597fb2c4520..01455c84c3ba65d77ecb811da8e8a8afa442e029 100644 (file)
--- a/segmentation/clitkExtractLungGenericFilter.txx
+++ b/segmentation/clitkExtractLungGenericFilter.txx
@@ -94,10 +94,10 @@ SetOptionsFromArgsInfoToFilter(FilterType * f)
   f->SetMaxElongation(mArgsInfo.maxElongation_arg);
   f->SetSeedPreProcessingThreshold(mArgsInfo.seedPreProcessingThreshold_arg);
 
-  typename FilterType::InputImageIndexType s;
+  typename FilterType::InputImagePointType s;
   if (mArgsInfo.seed_given) {
     ConvertOptionMacro(mArgsInfo.seed, s, 3, false);
-  f->AddSeed(s);
+    f->AddSeed(s);
   }
 
   f->SetMinimalComponentSize(mArgsInfo.minSize_arg);
@@ -113,6 +113,8 @@ SetOptionsFromArgsInfoToFilter(FilterType * f)
   else
     f->SetFillHolesFlag(true);
 
+  f->SetRemoveSmallLabelBeforeSeparationFlag(mArgsInfo.removeSmallLabel_flag);
+
   if (mArgsInfo.doNotSeparateLungs_given)
     f->SetSeparateLungsFlag(false);
   else