some small corrections

[clitk.git] / segmentation / clitkExtractLungGenericFilter.txx

diff --git a/segmentation/clitkExtractLungGenericFilter.txx b/segmentation/clitkExtractLungGenericFilter.txx
index 18fc2cfa2bc161d6771f493b5fd9af445a2504a3..77b4e8b730a19a3361010e53af4bddbad831f616 100644 (file)
--- a/segmentation/clitkExtractLungGenericFilter.txx
+++ b/segmentation/clitkExtractLungGenericFilter.txx
@@ -26,6 +26,7 @@ template<class ArgsInfoType>
 clitk::ExtractLungGenericFilter<ArgsInfoType>::ExtractLungGenericFilter():
   ImageToImageGenericFilter<Self>("ExtractLung") 
 {
+  this->SetFilterBase(NULL);
   // Default values
   cmdline_parser_clitkExtractLung_init(&mArgsInfo);
   InitializeImageType<3>();
@@ -78,6 +79,9 @@ void clitk::ExtractLungGenericFilter<ArgsInfoType>::UpdateWithInputImageType()
   // Create filter
   typedef clitk::ExtractLungFilter<ImageType, MaskImageType> FilterType;
   typename FilterType::Pointer filter = FilterType::New();
+
+  // Set the filter (needed for example for threaded monitoring)
+  this->SetFilterBase(filter);
     
   // Set global Options 
   filter->SetArgsInfo(mArgsInfo);
@@ -97,8 +101,7 @@ void clitk::ExtractLungGenericFilter<ArgsInfoType>::UpdateWithInputImageType()
   // Write/Save results
   typename OutputImageType::Pointer output = filter->GetOutput();
   this->template SetNextOutput<OutputImageType>(output); 
-  if (mArgsInfo.outputTrachea_given) 
-    this->template SetNextOutput<typename FilterType::MaskImageType>(filter->GetTracheaImage()); 
+  this->template SetNextOutput<typename FilterType::MaskImageType>(filter->GetTracheaImage()); 
 }
 //--------------------------------------------------------------------