add slider for temporal dim (not used)

[clitk.git] / segmentation / clitkExtractMediastinum.ggo

diff --git a/segmentation/clitkExtractMediastinum.ggo b/segmentation/clitkExtractMediastinum.ggo
index 490c673c60401d778071e3e1931fc055feee9122..4a42029569271ce141b3ae2739ddfdc9782211a7 100644 (file)
--- a/segmentation/clitkExtractMediastinum.ggo
+++ b/segmentation/clitkExtractMediastinum.ggo
@@ -21,14 +21,18 @@ option "lung"          l    "Input lung mask filename"        string        yes
 option "lungBG"        -       "Lung Background"                 int           default="0" no
 option "lungLeft"      -       "Lung Left value"                 int           default="1" no
 option "lungRight"     -       "Lung Right value"                int           default="2" no
+option "trachea"       t       "Input trachea mask filename"     string        yes
+option "tracheaBG"     -       "Trachea Background"              int           default="0" no
+option "afdb"          a       "Input Anatomical Feature DB"     string        no
 
 option "output"        o       "Output lungs mask filename"      string        yes
 
 section "Step 1 : Left/Right limits with lungs"
-
 option "spacing"     - "Intermediate resampling spacing"         double no default="6"
-option "fuzzy1"             -  "Fuzzy relative position threshold"       double no default="0.6"
+option "fuzzy1"             -  "Fuzzy relative position threshold"       double no default="0.4"
 
 section "Step 2 : Ant/Post limits with bones"
-
 option "fuzzy2"             -  "Fuzzy relative position threshold"       double no default="0.6"
+
+section "Step 3 : Inf limits with Lung"
+option "fuzzy3"             -  "Fuzzy relative position threshold"       double no default="0.2"