Moved from repository clitk to clitk.private/tests_dav

[clitk.git] / segmentation / clitkExtractMediastinumGenericFilter.txx

diff --git a/segmentation/clitkExtractMediastinumGenericFilter.txx b/segmentation/clitkExtractMediastinumGenericFilter.txx
index 54abc2f98df921637c2304e89e5833f2f5cf3a05..679fb36cc22deb0f372b21fe5966bbc414b3cc7f 100644 (file)
--- a/segmentation/clitkExtractMediastinumGenericFilter.txx
+++ b/segmentation/clitkExtractMediastinumGenericFilter.txx
@@ -75,13 +75,13 @@ SetOptionsFromArgsInfoToFilter(FilterType * f)
   f->SetOutputMediastinumFilename(mArgsInfo.output_arg);
   f->SetVerboseMemoryFlag(mArgsInfo.verboseMemory_flag);
 
+  f->SetDistanceMaxToAnteriorPartOfTheVertebralBody(mArgsInfo.maxAntSpine_arg);
   f->SetUseBones(mArgsInfo.useBones_flag);
-  f->SetIntermediateSpacing(mArgsInfo.spacing_arg);
-  f->SetFuzzyThreshold1(mArgsInfo.fuzzy1_arg);
-  f->SetFuzzyThreshold2(mArgsInfo.fuzzy2_arg);
-  f->SetFuzzyThreshold3(mArgsInfo.fuzzy3_arg);
-  f->SetUpperThreshold(mArgsInfo.upper_arg);
-  f->SetLowerThreshold(mArgsInfo.lower_arg);
+
+  // Set RelativePositionList filenames
+  for(uint i=0; i<mArgsInfo.relpos_given; i++) {
+    f->AddRelativePositionListFilename(mArgsInfo.relpos_arg[i]);
+  }
 }
 //--------------------------------------------------------------------