Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

[clitk.git] / segmentation / clitkExtractPatient.ggo

diff --git a/segmentation/clitkExtractPatient.ggo b/segmentation/clitkExtractPatient.ggo
index 6b15a6af14e7e167e2687bea3556f124a52b4906..f4944409a1b10e6286a9930b1046b659a2301ece 100644 (file)
--- a/segmentation/clitkExtractPatient.ggo
+++ b/segmentation/clitkExtractPatient.ggo
@@ -10,6 +10,7 @@ option "verboseStep"    -  "Verbose each step"                  flag          off
 option "writeStep"      w  "Write image at each step"    flag          off
 option "verboseOption"  -  "Display options values"       flag          off
 option "verboseWarningOff" -  "Do not display warning"    flag          off
+option "verboseMemory"  -  "Display memory usage"         flag          off
 
 section "I/O"
 
@@ -21,6 +22,7 @@ section "Binarize"
 
 option "lower"         -       "Initial lower threshold"       double          no      
 option "upper"         -       "Initial upper threshold"       double          no      default="-300"
+option "openingRadius"    - "Radius for opening after threshold"  int no  default="0"
 
 section "First Label Image (air=1)"
 
@@ -49,6 +51,6 @@ option  "remove"      -               "Labels to remove"                      int     no      multiple
 section "Clean-up"
 
 option "openClose"     -       "Perform morphological opening and closing with unit radius"    flag    off
-option "noAutoCrop"    -       "If set : do no crop final mask to BoundingBox"                         flag    on
+option "noAutoCrop"    -       "If set : do no crop final mask to BoundingBox"                         flag    off