Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

[clitk.git] / segmentation / clitkMorphoMath.ggo

diff --git a/segmentation/clitkMorphoMath.ggo b/segmentation/clitkMorphoMath.ggo
old mode 100755 (executable)
new mode 100644 (file)
index c672604..7959bc9
--- a/segmentation/clitkMorphoMath.ggo
+++ b/segmentation/clitkMorphoMath.ggo
@@ -2,30 +2,27 @@
 #Author: Jef Vandemeulebroucke <jefvdmb@gmail.com>
 #Date : Tue 28 April 2009 16.35 
 
-Package "clitk"
-Version "Morphological operations"
-
-option "config"                        -       "Config file"                     string        no
-
-
-section "Run Time"
-
-option "verbose"       v       "Verbose"                       flag            off
+package "clitk"
+version "Perform standard morphological operations"
 
+option "config"            - "Config file"   string  no
+option "verbose"    v "Verbose"             flag    off
+option "imagetypes" - "Display allowed image types"     flag          off
 
 section "Input"
 
-option "input"         i       "Input grid filename"             string        yes
-option "output"        o       "Output grid filename"            string        yes
+option "input"  i "Input grid filename"  string yes
+option "output" o "Output grid filename" string yes
 
 
 section "Processing Parameters"
 
-option "type"          t       "0=Erode, 1=Dilate, 2=Close (erode(dilate(x))), 3=Open (dilate(erode(x)))"      int             no      default="0"
+option "type"   t "0=Erode, 1=Dilate, 2=Close (erode(dilate(x))), 3=Open (dilate(erode(x))), 4=CondErode, 5=CondDilate"        int     no      default="0"
 option "fg"            -       "Foreground value"                                                              float           no      default="1"                     
 option "bg"            -       "Background value (0,1,3: filling value)"                                       float           no      default="0"             
 option "bound"         b       "0-1: Set borders to foreground/ 2:safe borders "                               flag            off 
 option "radius"        r       "Use binary ball element with given radius"                                     int             no      multiple        default="1"             
+option "radiusInMM"    m       "Use binary ball element with given radius in mm (rounded to nearest voxel value), you can give one radius by dimension" double         no      multiple        default="1"
 
-
+option "extend" - "Extend the image size according to radius"     flag          off