+/*
+# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+# pour la Santé)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+# Previous Authors : Laurent Guigues, Jean-Pierre Roux
+# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+#
+# This software is governed by the CeCILL-B license under French law and
+# abiding by the rules of distribution of free software. You can use,
+# modify and/ or redistribute the software under the terms of the CeCILL-B
+# license as circulated by CEA, CNRS and INRIA at the following URL
+# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+# or in the file LICENSE.txt.
+#
+# As a counterpart to the access to the source code and rights to copy,
+# modify and redistribute granted by the license, users are provided only
+# with a limited warranty and the software's author, the holder of the
+# economic rights, and the successive licensors have only limited
+# liability.
+#
+# The fact that you are presently reading this means that you have had
+# knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------
+*/
+
+
#include <creaImageIOMultiThreadImageReader.h>
#include <creaImageIOImageReader.h>
#include <wx/utils.h>
#include <creaImageIOSystem.h>
+ #include <creaImageIODicomImageReader.h>
+
+
#include <creaImageIOGimmick.h>
#ifdef _DEBUG
#define new DEBUG_NEW
vtkImageData* image)
{
wxMutexLocker lock(mMultiThreadImageReaderUserMutex);
-
this->OnMultiThreadImageReaderEvent(filename,type,image);
}
//=====================================================================
+ class wxThreadEED2
+ {
+ public:
+ void Delete() { printf("EED wxThreadEED2::Delete() \n"); }
+ int Run() { printf("EED wxThreadEED2::Run() \n"); return 0;}
+ void Pause() { printf("EED wxThreadEED2::Pause() \n"); }
+ void Create() { printf("EED wxThreadEED2::Create() \n"); }
+ bool IsAlive() { printf("EED wxThreadEED2::IsAlive() \n"); return false; }
+ bool TestDestroy() { printf("EED wxThreadEED2::TestDestroy() \n"); return false; }
+ int GetCurrentId() { printf("EED wxThreadEED2::GetCurrentId() \n"); return -999; }
+ };
+
//=====================================================================
- class ThreadedImageReader: public wxThread
+//EED 2018-08-20
+// class ThreadedImageReader: public wxThread
+ class ThreadedImageReader: public wxThreadEED2
{
public:
ThreadedImageReader(MultiThreadImageReader* tir) :
mMultiThreadImageReader(tir)
{}
-
void* Entry();
void OnExit();
-
vtkImageData* Read(const std::string& filename);
-
struct deleter
{
void operator()(ThreadedImageReader* p)
};
friend struct deleter;
-
private:
ImageReader mReader;
MultiThreadImageReader* mMultiThreadImageReader;
-
};
//=====================================================================
//=====================================================================
MultiThreadImageReader::MultiThreadImageReader(int number_of_threads)
: //mDoNotSignal(false),
- mReader(0),
+ mReader(NULL),
mTotalMem(0),
mTotalMemMax(1000000)
{
mDone = false;
// Create the threads
+
for (int i=0; i<number_of_threads; i++)
- {
- //ThreadedImageReader* t = new ThreadedImageReader(this);
- boost::shared_ptr<ThreadedImageReader> t(new ThreadedImageReader(this), ThreadedImageReader::deleter());
- mThreadedImageReaderList.push_back(t);
- std::cout << " ===> Thread "<<i
- <<" successfully added"<< std::endl;
- }
+ {
+ //ThreadedImageReader* t = new ThreadedImageReader(this);
+ boost::shared_ptr<ThreadedImageReader> t(new ThreadedImageReader(this), ThreadedImageReader::deleter());
+ mThreadedImageReaderList.push_back(t);
+ std::cout << " ===> Thread "<<i <<" successfully added"<< std::endl;
+ } // for
mNumberOfThreadedReadersRunning = 0;
// Init the queue
mQueue.set(mComparator);
//=====================================================================
bool MultiThreadImageReader::Start()
{
-
// std::cout << "#### MultiThreadImageReader::Start()"
// <<std::endl;
if (mNumberOfThreadedReadersRunning > 0) return true;
for (i =mThreadedImageReaderList.begin();
i!=mThreadedImageReaderList.end();
i++)
- {
- (*i)->Create();
- if ( (*i)->Run() != wxTHREAD_NO_ERROR )
- {
- std::cout << "ERROR starting a thread"<< std::endl;
- return false;
- }
- else
- {
- std::cout << " ===> Thread "<<(*i)->GetCurrentId()
- <<" successfully created"<< std::endl;
-
- }
- }
- wxMutexLocker locker(GetMultiThreadImageReaderUserMutex());
- // std::cout << "EO Start : #Threads running = "
- // << mNumberOfThreadedReadersRunning<<std::endl;
-
+ {
+ (*i)->Create();
+ if ( (*i)->Run() != wxTHREAD_NO_ERROR )
+ {
+ std::cout << "ERROR starting a thread"<< std::endl;
+ return false;
+ } else {
+ std::cout << " ===> Thread "<<(*i)->GetCurrentId()
+ <<" successfully created"<< std::endl;
+ } // if
+ } // for
+ wxMutexLocker locker(GetMultiThreadImageReaderUserMutex());
+ // std::cout << "EO Start : #Threads running = "
+ // << mNumberOfThreadedReadersRunning<<std::endl;
return true;
}
//=====================================================================
// std::cout << "#### MultiThreadImageReader::Stop()"
// <<std::endl;
// std::cout << "Sending stop order to the threads..."<<std::endl;
+
if (mDone) return;
ThreadedImageReaderListType::iterator i;
for (i =mThreadedImageReaderList.begin();
i!=mThreadedImageReaderList.end();
i++)
- { std::cout << " ===> Thread "<<(*i)->GetCurrentId()
+ {
+ std::cout << " ===> Thread "<<(*i)->GetCurrentId()
<<" successfully stopped"<< std::endl;
if((*i)->IsAlive())
- {(*i)->Pause();
+ {
+ (*i)->Pause();
(*i).reset();
- // (*i)->Delete();
- }
- }
+// (*i)->Delete();
+ } // if i
+ } // for
mThreadedImageReaderList.clear();
// Wait a little to be sure that all threads have stopped
// A better way to do this ?
while (true);
// std::cout << "All threads stopped : OK "<<std::endl;
- ImageMapType::iterator j;
- for (j =mImages.begin();
- j!=mImages.end();
- ++j)
- {
- delete j->first;
- }
- mImages.clear();
+ CleanMImagesMap();
+
mDone = true;
+
}
//=====================================================================
+
+ void MultiThreadImageReader::CleanMImagesMap()
+ {
+ ImageMapType::iterator j;
+ for (j=mImages.begin(); j!=mImages.end(); ++j)
+ {
+ delete j->first;
+ } //for
+ mImages.clear();
+ }
+
//=====================================================================
MultiThreadImageReader::~MultiThreadImageReader()
{
Stop();
if (mReader) delete mReader;
mThreadedImageReaderList.clear();
+
+ CleanMImagesMap();
+
+/*
+ ImageMapType::iterator it;
+ for (it=mImages.begin() ; it!=mImages.end(); it++)
+ {
+ printf("MultiThreadImageReader::~MultiThreadImageReader %s ", it.first->GetFilename() );
+ } // for it
+*/
+
}
//=====================================================================
}
}
//=====================================================================
+ // function to read attributes for a file
+ void MultiThreadImageReader::getAttributes(const std::string filename,
+ std::map <std::string , std::string> &infos,std::vector<std::string> i_attr)
+ {
+ mReader->getAttributes(filename, infos, i_attr);
+ }
//=====================================================================
void MultiThreadImageReader::Request( MultiThreadImageReaderUser* user,
// if (mNumberOfThreadedReadersRunning==0)
// if (mThreadedImageReaderList.size()==0)
if (true)
- {
+ {
ImageToLoad itl(this,filename);
ImageMapType::iterator i = mImages.find(&itl);
if (i!=mImages.end())
- {
- ImageToLoadPtr pitl = const_cast<ImageToLoadPtr>(i->first);
- // Already inserted
- if (pitl->GetImage() != 0)
- {
- // Already read
- UpdateUnloadPriority(pitl,
- GetMaximalPriorityWithoutLocking()+1);
- return pitl->GetImage();
- }
- }
+ {
+ ImageToLoadPtr pitl = const_cast<ImageToLoadPtr>(i->first);
+ // Already inserted
+ if (pitl->GetImage() != NULL)
+ {
+ // Already read
+ UpdateUnloadPriority( pitl, GetMaximalPriorityWithoutLocking()+1 );
+ return pitl->GetImage();
+ } // if pitl->GetImage()
+ } // if i
+
ImageToLoadPtr pitl = new ImageToLoad(this,filename,0);
- mImages[pitl] = 0;
- pitl->SetImage(mReader->ReadImage(filename));
- UpdateUnloadPriority(pitl,
- GetMaximalPriorityWithoutLocking()+1);
+ mImages[pitl] = NULL;
+ pitl->SetImage( mReader->ReadImage(filename) );
+ UpdateUnloadPriority( pitl, GetMaximalPriorityWithoutLocking()+1 );
return pitl->GetImage();
- }
-
+ } // if true
+
/*
mRequestedFilename = filename;
mRequestedImage = 0;
while (true);
//
*/
+ printf("EED MultiThreadImageReader::GetImage END\n");
+
}
//=====================================================================
// std::cout << "user="<<p->GetUser() <<std::endl;
if ( p->GetUser() == this )
+ {
GetMultiThreadImageReaderUserMutex().Unlock();
+ }
p->GetUser()->MultiThreadImageReaderSendEvent
(p->GetFilename(),
// wxMutexLocker lock(GetMultiThreadImageReaderUserMutex());
mUnloadQueue.insert(p);
+
+
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
p->GetImage()->UpdateInformation();
p->GetImage()->PropagateUpdateExtent();
long ImMem = p->GetImage()->GetEstimatedMemorySize();
+#else
+ int ext[6];
+ int dim[3];
+ p->GetImage()->GetExtent(ext);
+ dim[0] = ext[1]-ext[0]+1;
+ dim[1] = ext[3]-ext[2]+1;
+ dim[2] = ext[5]-ext[4]+1;
+ long ImMem = dim[0]*dim[1]*dim[2]*p->GetImage()->GetScalarSize();;
+#endif
mTotalMem += ImMem;
GimmickMessage(5,"==> Image in memory = "<<mUnloadQueue.size()<<std::endl);
std::string filename = unload->GetFilename();
GimmickMessage(5,"'" << filename << "'" << std::endl);
+
+//EED 2017-01-01 Migration VTK7
+#if VTK_MAJOR_VERSION <= 5
mTotalMem -= unload->GetImage()->GetEstimatedMemorySize();
+#else
+ int ext[6];
+ int dim[3];
+ unload->GetImage()->GetExtent(ext);
+ dim[0] = ext[1]-ext[0]+1;
+ dim[1] = ext[3]-ext[2]+1;
+ dim[2] = ext[5]-ext[4]+1;
+ mTotalMem -= dim[0]*dim[1]*dim[2]*unload->GetImage()->GetScalarSize();
+#endif
GimmickMessage(5," ==> Total mem = "<<mTotalMem<<" Ko "<<std::endl);
// std::cout << "### Thread "<<GetCurrentId()<<" : reading '"
// << i->GetFilename() << "' : DONE" << std::endl;
- }
- else
- {
+ } else {
mMultiThreadImageReader->MultiThreadImageReaderEventUnlock();
//mMutex.Unlock();
// Wait a little to avoid blocking
- Sleep(10);
+ wxMilliSleep(10);
}
};
// std::cout << "### Thread "<<GetCurrentId()<<" stopping"