// gdcmDicomDir.cxx
//-----------------------------------------------------------------------------
#include "gdcmDicomDir.h"
-#include "gdcmPatient.h"
#include "gdcmStudy.h"
#include "gdcmSerie.h"
#include "gdcmImage.h"
+#include "gdcmUtil.h"
#include <string>
+//-----------------------------------------------------------------------------
+// Constructor / Destructor
+
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param Filename
+ * @param exception_on_error
+ */
gdcmDicomDir::gdcmDicomDir(std::string & FileName,
bool exception_on_error):
- gdcmParser(FileName.c_str(),exception_on_error, true ) {
-
-
- gdcmPatient *patCur;
- gdcmStudy *studCur;
- gdcmSerie *serCur;
- gdcmImage *imaCur;
-
- ListTag::iterator i, j;
-
-
- if ( GetListEntry().begin() == GetListEntry().end() ) {
- cout << "ListEntry vide " << endl;
- }
-
- i = GetListEntry().begin();
- while ( i != GetListEntry().end() ) {
-
- // std::cout << std::hex << (*i)->GetGroup() <<
- // " " << (*i)->GetElement() << endl;
-
- std::string v = (*i)->GetValue();
- if (v == "PATIENT ") {
- patCur=new gdcmPatient();
- //cout << "PATIENT" << endl,
- patCur->beginObj =i;
- GetPatients().push_back(patCur);
- }
-
- if (v == "STUDY ") {
- //cout << "STUDY" << endl,
- studCur=new gdcmStudy();
- studCur->beginObj = patCur->endObj = i;
- lPatient::iterator aa = GetPatients().end();
- --aa;
- (*aa)->GetStudies().push_back(studCur);
- }
- studCur=new gdcmStudy();
-
- if (v == "SERIES") {
- //cout << "SERIES" << endl,
- serCur=new gdcmSerie();
-
- serCur->beginObj = studCur->endObj= i;
- lPatient::iterator aa = GetPatients().end();
- --aa;
- lStudy::iterator bb = (*aa)->GetStudies().end();
- --bb;
- (*bb)->GetSeries().push_back(serCur);
- }
-
- if (v == "IMAGE ") {
- //cout << "IMAGE" << endl;
- imaCur=new gdcmImage();
- imaCur->beginObj = serCur->endObj= i;
-
- lPatient::iterator aa = GetPatients().end();
- --aa;
- lStudy::iterator bb = (*aa)->GetStudies().end();
- --bb;
- lSerie::iterator cc = (*bb)->GetSeries().end();
- --cc;
- (*cc)->GetImages().push_back(imaCur);
-
-
- /* ---
- // ce n'est pas sur une nouvelle IMAGE, qu'il faut intervenir
- // mais lorsqu'on rencontre un 'non IMAGE' apres des 'IMAGE'
- lImage::iterator dd = (*cc)->GetImages().end();
-
- if ( (*cc)->GetImages().begin() != dd ) {
- --dd;
- (*dd)->endObj = i;
- }
- --- */
- }
- ++i;
- }
+ gdcmParser(FileName.c_str(),exception_on_error, true )
+{
+ if ( GetListEntry().begin() == GetListEntry().end() )
+ {
+ dbg.Verbose(0, "gdcmDicomDir::gdcmDicomDir entry list empty");
+ }
+ CreateDicomDir();
}
-gdcmDicomDir::~gdcmDicomDir() {
- lPatient::iterator cc = GetPatients().begin();
- while (cc != GetPatients().end() ) {
- //cout << "delete PATIENT" << endl;
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param exception_on_error
+ */
+gdcmDicomDir::gdcmDicomDir(ListTag *l,
+ bool exception_on_error):
+ gdcmParser(exception_on_error )
+{
+ listEntries=*l;
+ CreateDicomDir();
+}
+
+/*
+ * \ingroup gdcmDicomDir
+ * \brief Canonical destructor
+ */
+gdcmDicomDir::~gdcmDicomDir()
+{
+ for(ListPatient::iterator cc = patients.begin();cc!=patients.end();++cc)
+ {
delete *cc;
- ++cc;
}
}
+
+
+
+//-----------------------------------------------------------------------------
+// Print
+void gdcmDicomDir::Print(std::ostream &os)
+{
+ for(ListPatient::iterator cc = patients.begin();cc!=patients.end();++cc)
+ {
+ (*cc)->SetPrintLevel(printLevel);
+ (*cc)->Print(os);
+ }
+}
+
+//-----------------------------------------------------------------------------
+// Public
+
+
+/**
+ * \ingroup gdcmDicomDir
+ * \brief writes on disc a DICOMDIR
+ * \ warning does NOT add the missing elements in the header :
+ * \ it's up to the user doing it !
+ * @param fileName file to be written to
+ * @return
+ */
+bool gdcmDicomDir::Write(std::string fileName) {
+
+ FILE * fp1;
+ fp1 = fopen(fileName.c_str(),"wb");
+ if (fp1 == NULL) {
+ printf("Failed to open (write) File [%s] \n",fileName.c_str());
+ return (false);
+ }
+ char * filePreamble;
+ filePreamble=(char*)calloc(128,1);
+ fwrite(filePreamble,128,1,fp1);
+ fwrite("DICM",4,1,fp1);
+ free (filePreamble);
+ WriteEntries(DICOMDIR,fp1);
+
+ return true;
+
+}
+
+//-----------------------------------------------------------------------------
+// Protected
+
+//-----------------------------------------------------------------------------
+// Private
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+void gdcmDicomDir::CreateDicomDir()
+{
+ // The list is parsed. When a tag is found :
+ // 1 - we save the beginning iterator
+ // 2 - we continue to parse
+ // 3 - we find an other tag
+ // + we create the object for the precedent tag
+ // + loop to 1 -
+
+ gdcmDicomDirType type=gdcmDicomDir::GDCM_NONE;
+ ListTag::iterator begin;
+ ListTag::iterator end;
+
+ begin=listEntries.begin();
+ end=begin;
+ for(ListTag::iterator i=listEntries.begin();i != listEntries.end();++i)
+ {
+ // std::cout << std::hex << (*i)->GetGroup() <<
+ // " " << (*i)->GetElement() << endl;
+
+ std::string v = (*i)->GetValue();
+ if (v == "PATIENT ")
+ {
+ // std::cout<<"PATIENT"<<std::endl;
+ end=i;
+ AddObjectToEnd(type,begin,end);
+
+ type=gdcmDicomDir::GDCM_PATIENT;
+ begin=end;
+ }
+
+ if (v == "STUDY ")
+ {
+ // std::cout<<"STUDY"<<std::endl;
+ end=i;
+ AddObjectToEnd(type,begin,end);
+
+ type=gdcmDicomDir::GDCM_STUDY;
+ begin=end;
+ }
+
+ if (v == "SERIES")
+ {
+ // std::cout<<"SERIES"<<std::endl;
+ end=i;
+ AddObjectToEnd(type,begin,end);
+
+ type=gdcmDicomDir::GDCM_SERIE;
+ begin=end;
+ }
+
+ if (v == "IMAGE ")
+ {
+ // std::cout<<"IMAGE"<<std::endl;
+ end=i;
+ AddObjectToEnd(type,begin,end);
+
+ type=gdcmDicomDir::GDCM_IMAGE;
+ begin=end;
+ }
+ }
+
+ end=GetListEntry().end();
+ AddObjectToEnd(type,begin,end);
+}
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+void gdcmDicomDir::AddObjectToEnd(gdcmDicomDirType type,ListTag::iterator begin,ListTag::iterator end)
+{
+ if(begin==end)
+ return;
+
+ switch(type)
+ {
+ case gdcmDicomDir::GDCM_PATIENT:
+ AddPatientToEnd(begin,end);
+ break;
+ case gdcmDicomDir::GDCM_STUDY:
+ AddStudyToEnd(begin,end);
+ break;
+ case gdcmDicomDir::GDCM_SERIE:
+ AddSerieToEnd(begin,end);
+ break;
+ case gdcmDicomDir::GDCM_IMAGE:
+ AddImageToEnd(begin,end);
+ break;
+ }
+}
+
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+void gdcmDicomDir::AddPatientToEnd(ListTag::iterator begin,ListTag::iterator end)
+{
+ patients.push_back(new gdcmPatient(begin,end));
+}
+
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+ void gdcmDicomDir::AddStudyToEnd(ListTag::iterator begin,ListTag::iterator end)
+{
+ if(patients.size()>0)
+ {
+ ListPatient::iterator itp=patients.end();
+ itp--;
+ (*itp)->AddStudy(new gdcmStudy(begin,end));
+ }
+}
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+void gdcmDicomDir::AddSerieToEnd(ListTag::iterator begin,ListTag::iterator end)
+{
+ if(patients.size()>0)
+ {
+ ListPatient::iterator itp=patients.end();
+ itp--;
+
+ if((*itp)->GetStudies().size()>0)
+ {
+ ListStudy::iterator itst=(*itp)->GetStudies().end();
+ itst--;
+ (*itst)->AddSerie(new gdcmSerie(begin,end));
+ }
+ }
+}
+
+/*
+ * \ingroup gdcmDicomDir
+ * \brief
+ * @param
+ */
+ void gdcmDicomDir::AddImageToEnd(ListTag::iterator begin,ListTag::iterator end)
+{
+ if(patients.size()>0)
+ {
+ ListPatient::iterator itp=patients.end();
+ itp--;
+
+ if((*itp)->GetStudies().size()>0)
+ {
+ ListStudy::iterator itst=(*itp)->GetStudies().end();
+ itst--;
+
+ if((*itst)->GetSeries().size()>0)
+ {
+ ListSerie::iterator its=(*itst)->GetSeries().end();
+ its--;
+ (*its)->AddImage(new gdcmImage(begin,end));
+ }
+ }
+ }
+}
+
+//-----------------------------------------------------------------------------
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff