Program: gdcm
Module: $RCSfile: gdcmDicomDir.cxx,v $
Language: C++
- Date: $Date: 2005/07/08 19:07:12 $
- Version: $Revision: 1.146 $
+ Date: $Date: 2005/10/25 09:22:15 $
+ Version: $Revision: 1.166 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
// PS 3.3-2003, pages 731-750
//-----------------------------------------------------------------------------
#include "gdcmDicomDir.h"
+#include "gdcmDicomDirObject.h"
#include "gdcmDicomDirStudy.h"
#include "gdcmDicomDirSerie.h"
#include "gdcmDicomDirVisit.h"
#include "gdcmFile.h"
#include "gdcmSeqEntry.h"
#include "gdcmSQItem.h"
-#include "gdcmValEntry.h"
+#include "gdcmDataEntry.h"
#include <fstream>
#include <string>
//
// (Root directory Entity) PATIENT
// PATIENT STUDY
-// STUDY SERIES
+// STUDY SERIES
+// STUDY VISIT
// SERIES IMAGE
// IMAGE /
//
NewMeta();
}
-/**
- * \brief Constructor Parses recursively the directory and creates the DicomDir
+#ifndef GDCM_LEGACY_REMOVE
+/* *
+ * \ brief Constructor Parses recursively the directory and creates the DicomDir
* or uses an already built DICOMDIR, depending on 'parseDir' value.
- * @param fileName name
+ * @ param fileName name
* - of the root directory (parseDir = true)
* - of the DICOMDIR (parseDir = false)
- * @param parseDir boolean
+ * @ param parseDir boolean
* - true if user passed an entry point
* and wants to explore recursively the directories
* - false if user passed an already built DICOMDIR file
* and wants to use it
+ * @ deprecated use : new DicomDir() + [ SetLoadMode(lm) + ] SetDirectoryName(name)
+ * or : new DicomDir() + SetFileName(name)
*/
DicomDir::DicomDir(std::string const &fileName, bool parseDir ):
Document( )
// (nothing is cheked in Document constructor, to avoid overhead)
ParseDir = parseDir;
- SetLoadMode (0x00000000); // concerns only dicom files
- Load( fileName );
+ SetLoadMode (LD_ALL); // concerns only dicom files
+ SetFileName( fileName );
+ Load( );
}
+#endif
/**
* \brief Canonical destructor
*/
DicomDir::~DicomDir()
{
- SetStartMethod(NULL);
- SetProgressMethod(NULL);
- SetEndMethod(NULL);
+ SetStartMethod(NULL,NULL,NULL);
+ SetProgressMethod(NULL,NULL,NULL);
+ SetEndMethod(NULL,NULL,NULL);
ClearPatient();
if ( MetaElems )
// Public
/**
- * \brief Loader. use SetLoadMode(), SetFileName() before !
+ * \brief Loader. use SetFileName(fn)
+ * or SetLoadMode(lm) + SetDirectoryName(dn) before !
* @return false if file cannot be open or no swap info was found,
* or no tag was found.
*/
bool DicomDir::Load( )
{
- // We should clean out anything that already exists.
- Initialize(); // sets all private fields to NULL
-
if (!ParseDir)
{
if ( ! this->Document::Load( ) )
return false;
}
- return DoTheLoadingJob( );
+ return DoTheLoadingJob( );
}
-/**
- * \brief Loader. (DEPRECATED : not to break the API)
- * @param fileName file to be open for parsing
- * @return false if file cannot be open or no swap info was found,
+#ifndef GDCM_LEGACY_REMOVE
+/* *
+ * \ brief Loader. (DEPRECATED : kept not to break the API)
+ * @ param fileName file to be open for parsing
+ * @ return false if file cannot be open or no swap info was found,
* or no tag was found.
+ * @ deprecated use SetFileName(n) + Load() instead
*/
bool DicomDir::Load(std::string const &fileName )
{
- // We should clean out anything that already exists.
- Initialize(); // sets all private fields to NULL
+ SetFileName(fileName);
+ return Load();
+}
- SetFileName( fileName );
- if (!ParseDir)
- {
- if ( ! this->Document::Load( ) )
- return false;
- }
- return DoTheLoadingJob( );
+/// DEPRECATED : use SetDirectoryName(dname) instead
+/* *
+ * \brief Loader. (DEPRECATED : kept not to break the API)
+ * @param paseDir Parse Dir
+ * @deprecated use SetDirectoryName(dname) instead
+ */
+void DicomDir::SetParseDir(bool parseDir)
+{
+ ParseDir = parseDir;
}
+#endif
/**
* \brief Does the Loading Job (internal use only)
*/
bool DicomDir::DoTheLoadingJob( )
{
- // We should clean out anything that already exists.
- Initialize(); // sets all private fields to NULL
+ Progress = 0.0f;
+ Abort = false;
if (!ParseDir)
{
// Only if user passed a DICOMDIR
// ------------------------------
Fp = 0;
- if ( !OpenFile() )
- {
- return false;
- }
if (!Document::Load() )
{
return false;
if ( dynamic_cast<SeqEntry *>(entry) )
break;
- RemoveEntryNoDestroy(entry);
MetaElems->AddEntry(entry);
+ RemoveEntry(entry);
entry = GetFirstEntry();
}
CreateDicomDir();
}
+void DicomDir::SetStartMethod( DicomDir::Method *method, void *arg )
+{
+ SetStartMethod(method,arg,NULL);
+}
+
+void DicomDir::SetProgressMethod( DicomDir::Method *method, void *arg )
+{
+ SetProgressMethod(method,arg,NULL);
+}
+
+void DicomDir::SetEndMethod( DicomDir::Method *method, void *arg )
+{
+ SetEndMethod(method,arg,NULL);
+}
+
/**
* \brief Set the start method to call when the parsing of the
* directory starts.
* @return false only when fail to open
*/
-bool DicomDir::WriteDicomDir(std::string const &fileName)
+bool DicomDir::Write(std::string const &fileName)
{
int i;
uint16_t sq[4] = { 0x0004, 0x1220, 0xffff, 0xffff };
* @return true
*/
-bool DicomDir::AnonymizeDicomDir()
+bool DicomDir::Anonymize()
{
- ValEntry *v;
+ DataEntry *v;
// Something clever to be found to forge the Patient names
std::ostringstream s;
int i = 1;
++cc)
{
s << i;
- v = (*cc)->GetValEntry(0x0010, 0x0010) ; // Patient's Name
+ v = (*cc)->GetDataEntry(0x0010, 0x0010) ; // Patient's Name
if (v)
{
- v->SetValue(s.str());
+ v->SetString(s.str());
}
- v = (*cc)->GetValEntry(0x0010, 0x0020) ; // Patient ID
+ v = (*cc)->GetDataEntry(0x0010, 0x0020) ; // Patient ID
if (v)
{
- v->SetValue(" ");
+ v->SetString(" ");
}
- v = (*cc)->GetValEntry(0x0010, 0x0030) ; // Patient's BirthDate
+ v = (*cc)->GetDataEntry(0x0010, 0x0030) ; // Patient's BirthDate
if (v)
{
- v->SetValue(" ");
+ v->SetString(" ");
}
s << "";
i++;
break;
}
- f = new File( );
- f->SetLoadMode(LoadMode); // we allow user not to load Sequences...
- f->Load( it->c_str() );
+ f = new File( );
+ f->SetLoadMode(LoadMode); // we allow user not to load Sequences, or Shadow
+ // groups, or ......
+ f->SetFileName( it->c_str() );
+ /*int res = */f->Load( );
// if ( !f )
// {
// 3 - we find an other tag
// + we create the object for the precedent tag
// + loop to 1 -
+ gdcmDebugMacro("Create DicomDir");
// Directory record sequence
DocEntry *e = GetDocEntry(0x0004, 0x1220);
while(tmpSI)
{
d = tmpSI->GetDocEntry(0x0004, 0x1430); // Directory Record Type
- if ( ValEntry* valEntry = dynamic_cast<ValEntry *>(d) )
+ if ( DataEntry *dataEntry = dynamic_cast<DataEntry *>(d) )
{
- v = valEntry->GetValue();
+ v = dataEntry->GetString();
}
else
{
- gdcmWarningMacro( "(0004,1430) not a ValEntry ?!?");
+ gdcmWarningMacro( "(0004,1430) not a DataEntry ?!?");
continue;
}
continue;
}
if ( si )
- MoveSQItem(si,tmpSI);
+ si->MoveObject(tmpSI); // New code : Copies the List
tmpSI=s->GetNextSQItem();
}
++it )
{
// get the current file characteristics
- patCurName = (*it)->GetEntryValue(0x0010,0x0010);
- patCurID = (*it)->GetEntryValue(0x0010,0x0011);
- studCurInstanceUID = (*it)->GetEntryValue(0x0020,0x000d);
- studCurID = (*it)->GetEntryValue(0x0020,0x0010);
- serCurInstanceUID = (*it)->GetEntryValue(0x0020,0x000e);
- serCurID = (*it)->GetEntryValue(0x0020,0x0011);
+ patCurName = (*it)->GetEntryString(0x0010,0x0010);
+ patCurID = (*it)->GetEntryString(0x0010,0x0011);
+ studCurInstanceUID = (*it)->GetEntryString(0x0020,0x000d);
+ studCurID = (*it)->GetEntryString(0x0020,0x0010);
+ serCurInstanceUID = (*it)->GetEntryString(0x0020,0x000e);
+ serCurID = (*it)->GetEntryString(0x0020,0x0011);
if ( patCurName != patPrevName || patCurID != patPrevID || first )
{
ListDicomDirElem::const_iterator it;
uint16_t tmpGr, tmpEl;
DictEntry *dictEntry;
- ValEntry *entry;
+ DataEntry *entry;
std::string val;
SQItem *si;
}
break;
case GDCM_DICOMDIR_META:
- elemList = Global::GetDicomDirElements()->GetDicomDirMetaElements();
- si = new DicomDirMeta(true);
if ( MetaElems )
{
delete MetaElems;
gdcmErrorMacro( "MetaElements already exist, they will be destroyed");
}
- MetaElems = static_cast<DicomDirMeta *>(si);
+ elemList = Global::GetDicomDirElements()->GetDicomDirMetaElements();
+ MetaElems = new DicomDirMeta(true);
+ si = MetaElems;
break;
default:
return;
tmpEl = it->Elem;
dictEntry = GetPubDict()->GetEntry(tmpGr, tmpEl);
- entry = new ValEntry( dictEntry ); // Be sure it's never a BinEntry !
-
+ entry = DataEntry::New( dictEntry );
entry->SetOffset(0); // just to avoid further missprinting
if ( header )
{
// NULL when we Build Up (ex nihilo) a DICOMDIR
// or when we add the META elems
- val = header->GetEntryValue(tmpGr, tmpEl);
+ val = header->GetEntryString(tmpGr, tmpEl);
}
else
{
val = it->Value;
}
- entry->SetValue( val ); // troubles expected when vr=SQ ...
+ entry->SetString( val ); // troubles expected when vr=SQ ...
if ( type == GDCM_DICOMDIR_META ) // fusible : should never print !
{
gdcmWarningMacro("GDCM_DICOMDIR_META ?!? should never print that");
}
si->AddEntry(entry);
+ entry->Delete();
}
}
* @param src source SQItem
*/
void DicomDir::MoveSQItem(DocEntrySet *dst,DocEntrySet *src)
-{
+{
DocEntry *entry;
entry = src->GetFirstEntry();
while(entry)
{
- src->RemoveEntryNoDestroy(entry);
+ src->RemoveEntry(entry);
dst->AddEntry(entry);
// we destroyed -> the current iterator is not longer valid
entry = src->GetFirstEntry();
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff