Module: $RCSfile: gdcmFileHelper.cxx,v $
Language: C++
- Date: $Date: 2007/08/28 09:29:26 $
- Version: $Revision: 1.123 $
+ Date: $Date: 2007/09/18 10:50:37 $
+ Version: $Revision: 1.130 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
-
These lines will be moved to the document-to-be 'Developer's Guide'
WriteMode : WMODE_RAW / WMODE_RGB
}
/**
- * \brief Access to the underlying \ref PixelReadConverter RGBA LUT
+ * \brief Access to the underlying PixelReadConverter RGBA LUT
*/
uint8_t* FileHelper::GetLutRGBA()
{
}
/**
- * \brief Access to the underlying \ref PixelReadConverter RGBA LUT Item Number
+ * \brief Access to the underlying PixelReadConverter RGBA LUT Item Number
*/
int FileHelper::GetLutItemNumber()
{
}
/**
- * \brief Access to the underlying \ref PixelReadConverter RGBA LUT Item Size
+ * \brief Access to the underlying PixelReadConverter RGBA LUT Item Size
*/
int FileHelper::GetLutItemSize()
{
CheckMandatoryElements(); //called once, here !
bool flag = false;
- DocEntry *e;
switch(WriteType)
{
case ImplicitVR:
// was :
//PixelWriteConverter->SetCompressJPEGUserData(
// inData, expectedSize, FileInternal);
- PixelWriteConverter->SetCompressJPEGUserData(
- PixelWriteConverter->GetUserData(),
- PixelWriteConverter->GetUserDataSize(),FileInternal);
+ PixelWriteConverter->SetCompressJPEGUserData(
+ PixelWriteConverter->GetUserData(),
+ PixelWriteConverter->GetUserDataSize(),FileInternal);
break;
case JPEG2000:
- /// \TODO Maybe we should consider doing the compression here !
+ /// \todo Maybe we should consider doing the compression here !
// PixelWriteConverter->SetCompressJPEG2000UserData(inData, expectedSize, FileInternal);
SetWriteFileTypeToJPEG2000();
PixelWriteConverter->GetUserData(),
PixelWriteConverter->GetUserDataSize(),
FileInternal);
-
break;
}
int numberBitsAllocated = FileInternal->GetBitsAllocated();
if ( numberBitsAllocated == 0 || numberBitsAllocated == 12 )
{
- gdcmWarningMacro( "numberBitsAllocated changed from "
- << numberBitsAllocated << " to 16 "
+ gdcmWarningMacro( "numberBitsAllocated changed from "
+ << numberBitsAllocated << " to 16 "
<< " for consistency purpose" );
numberBitsAllocated = 16;
}
size_t decSize = FileInternal->GetXSize()
- * FileInternal->GetYSize()
+ * FileInternal->GetYSize()
* FileInternal->GetZSize()
* FileInternal->GetTSize()
* FileInternal->GetSamplesPerPixel()
if ( FileInternal->HasLUT() )
rgbSize = decSize * 3;
+ size_t userDataSize = PixelWriteConverter->GetUserDataSize();
switch(WriteMode)
{
case WMODE_RAW :
- if ( decSize!=PixelWriteConverter->GetUserDataSize() )
+ if ( abs((long)(decSize-userDataSize))>1) // ignore padding zero
{
gdcmWarningMacro( "Data size (Raw) is incorrect. Should be "
<< decSize << " / Found :"
- << PixelWriteConverter->GetUserDataSize() );
+ << userDataSize );
return false;
}
break;
case WMODE_RGB :
- if ( rgbSize!=PixelWriteConverter->GetUserDataSize() )
+ if ( abs((long)(rgbSize-userDataSize))>1) // ignore padding zero
{
gdcmWarningMacro( "Data size (RGB) is incorrect. Should be "
- << decSize << " / Found "
- << PixelWriteConverter->GetUserDataSize() );
+ << rgbSize << " / Found "
+ << userDataSize );
return false;
}
break;
-4) user modified/added some tags *without processing* the pixels (anonymization...)
UNMODIFIED_PIXELS_IMAGE
-Probabely some more to be added.
+ --> Set it with FileHelper::SetContentType(int);
gdcm::FileHelper::CheckMandatoryElements() deals automatically with these cases.
--> 'Referenced SOP Instance UID' (0x0008, 0x1155)
whose value is the original 'SOP Class UID'
-3) TODO : find a trick to allow user to pass to the writter the list of the Dicom images
+3) TO DO : find a trick to allow user to pass to the writter the list of the Dicom images
or the Series, (or the Study ?) he used to created his image
(MIP, MPR, cartography image, ...)
These info should be stored (?)
if ( ContentType != USER_OWN_IMAGE) // when it's not a user made image
{
-
- gdcmDebugMacro( "USER_OWN_IMAGE (1)");
- // If 'SOP Class UID' exists ('true DICOM' image)
+ // If 'SOP Class UID' and 'SOP Instance UID' exist ('true DICOM' image)
// we create the 'Source Image Sequence' SeqEntry
// to hold informations about the Source Image
DataEntry *e_0008_0016 = FileInternal->GetDataEntry(0x0008, 0x0016);
- if ( e_0008_0016 )
+ DataEntry *e_0008_0018 = FileInternal->GetDataEntry(0x0008, 0x0018);
+ if ( e_0008_0016 && e_0008_0018)
{
// Create 'Source Image Sequence' SeqEntry
-// SeqEntry *sis = SeqEntry::New (
-// Global::GetDicts()->GetDefaultPubDict()->GetEntry(0x0008, 0x2112) );
SeqEntry *sis = SeqEntry::New (0x0008, 0x2112);
SQItem *sqi = SQItem::New(1);
- // (we assume 'SOP Instance UID' exists too)
- // create 'Referenced SOP Class UID'
-// DataEntry *e_0008_1150 = DataEntry::New(
-// Global::GetDicts()->GetDefaultPubDict()->GetEntry(0x0008, 0x1150) );
+
+ // create 'Referenced SOP Class UID' from 'SOP Class UID'
+
DataEntry *e_0008_1150 = DataEntry::New(0x0008, 0x1150, "UI");
e_0008_1150->SetString( e_0008_0016->GetString());
sqi->AddEntry(e_0008_1150);
e_0008_1150->Delete();
- // create 'Referenced SOP Instance UID'
+ // create 'Referenced SOP Instance UID' from 'SOP Instance UID'
DataEntry *e_0008_0018 = FileInternal->GetDataEntry(0x0008, 0x0018);
-// DataEntry *e_0008_1155 = DataEntry::New(
-// Global::GetDicts()->GetDefaultPubDict()->GetEntry(0x0008, 0x1155) );
- DataEntry *e_0008_1155 = DataEntry::New(0x0008, 0x1155, "UI");
+
+ DataEntry *e_0008_1155 = DataEntry::New(0x0008, 0x1155, "UI");
e_0008_1155->SetString( e_0008_0018->GetString());
sqi->AddEntry(e_0008_1155);
e_0008_1155->Delete();
-
+
sis->AddSQItem(sqi,1);
sqi->Delete();
// temporarily replaces any previous 'Source Image Sequence'
Archive->Push(sis);
sis->Delete();
-
// FIXME : is 'Image Type' *really* depending on the presence of 'SOP Class UID'?
if ( ContentType == FILTERED_IMAGE)
// the user *knows* he just modified the pixels
PixelReadConverter = new PixelReadConvert;
PixelWriteConverter = new PixelWriteConvert;
Archive = new DocEntryArchive( FileInternal );
+
+ KeepOverlays = false;
}
/**
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff