-
#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
+# Add Libraries used in vv and clitk to avoid recompilation
+WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
+ADD_LIBRARY(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
+
+WRAP_GGO(clitkImageConvert_GGO_C clitkImageConvert.ggo)
+ADD_LIBRARY(clitkImageConvertLib clitkImageConvertGenericFilter.cxx ${clitkImageConvert_GGO_C})
+
+WRAP_GGO(clitkBinarizeImage_GGO_C clitkBinarizeImage.ggo)
+ADD_LIBRARY(clitkBinarizeImageLib clitkBinarizeImageGenericFilter.cxx ${clitkBinarizeImage_GGO_C})
+
+WRAP_GGO(clitkImageArithm_GGO_C clitkImageArithm.ggo)
+ADD_LIBRARY(clitkImageArithmImageLib clitkImageArithmGenericFilter.cxx ${clitkImageArithm_GGO_C})
+
+WRAP_GGO(clitkVectorArithm_GGO_C clitkVectorArithm.ggo)
+ADD_LIBRARY(clitkVectorArithmLib clitkVectorArithmGenericFilter.cxx ${clitkVectorArithm_GGO_C})
+
+WRAP_GGO(clitkResampleImage_GGO_C clitkResampleImage.ggo)
+ADD_LIBRARY(clitkResampleImageLib clitkResampleImageGenericFilter.cxx ${clitkResampleImage_GGO_C})
+
+WRAP_GGO(clitkMIP_GGO_C clitkMIP.ggo)
+ADD_LIBRARY(clitkMIPLib clitkMIPGenericFilter.cxx ${clitkMIP_GGO_C})
+
+WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
+ADD_LIBRARY(clitkMedianImageFilterLib clitkMedianImageGenericFilter.cxx ${clitkMedianImageFilter_GGO_C})
+
#=========================================================
+IF (CLITK_BUILD_TOOLS)
+
+ WRAP_GGO(clitkDicomInfo_GGO_C clitkDicomInfo.ggo)
+ ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx ${clitkDicomInfo_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon)
+ # set_target_properties(clitkDicomInfo
+ # PROPERTIES
+ # LINK_INTERFACE_LIBRARIES ""
+ # )
+ SET(TOOLS_INSTALL clitkDicomInfo)
+
+ WRAP_GGO(clitkDicom2Image_GGO_C clitkDicom2Image.ggo)
+ ADD_EXECUTABLE(clitkDicom2Image clitkDicom2Image.cxx ${clitkDicom2Image_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDicom2Image clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicom2Image)
+
+ WRAP_GGO(clitkDicomWave2Text_GGO_C clitkDicomWave2Text.ggo)
+ ADD_EXECUTABLE(clitkDicomWave2Text clitkDicomWave2Text.cxx ${clitkDicomWave2Text_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDicomWave2Text clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomWave2Text)
+
+ WRAP_GGO(clitkImageInfo_GGO_C clitkImageInfo.ggo)
+ ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx ${clitkImageInfo_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageInfo)
+
+ ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx)
+ TARGET_LINK_LIBRARIES(clitkImageConvert clitkImageConvertLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageConvert)
+
+ ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx)
+ TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkBinarizeImageLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinarizeImage)
+
+ WRAP_GGO(clitkVFResample_GGO_C clitkVFResample.ggo)
+ ADD_EXECUTABLE(clitkVFResample clitkVFResample.cxx clitkVFResampleGenericFilter.cxx ${clitkVFResample_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkVFResample clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFResample)
+
+ WRAP_GGO(clitkVFInterpolate_GGO_C clitkVFInterpolate.ggo)
+ ADD_EXECUTABLE(clitkVFInterpolate clitkVFInterpolate.cxx clitkVFInterpolateGenericFilter.cxx ${clitkVFInterpolate_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkVFInterpolate clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFInterpolate)
+
+ WRAP_GGO(clitkImageCreate_GGO_C clitkImageCreate.ggo)
+ ADD_EXECUTABLE(clitkImageCreate clitkImageCreate.cxx ${clitkImageCreate_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageCreate clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageCreate)
+
+ WRAP_GGO(clitkZeroVF_GGO_C clitkZeroVF.ggo)
+ ADD_EXECUTABLE(clitkZeroVF clitkZeroVF.cxx ${clitkZeroVF_GGO_C} clitkZeroVFGenericFilter.cxx)
+ TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkZeroVF)
+
+ WRAP_GGO(clitkSplitImage_GGO_C clitkSplitImage.ggo)
+ ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImageGenericFilter.cxx ${clitkSplitImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkSplitImage clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSplitImage)
+
+ WRAP_GGO(clitkWriteDicomSeries_GGO_C clitkWriteDicomSeries.ggo)
+ ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx ${clitkWriteDicomSeries_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWriteDicomSeries)
+
+ WRAP_GGO(clitkMedianTemporalDimension_GGO_C clitkMedianTemporalDimension.ggo)
+ ADD_EXECUTABLE(clitkMedianTemporalDimension clitkMedianTemporalDimension.cxx
+ ${clitkMedianTemporalDimension_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMedianTemporalDimension clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianTemporalDimension)
+
+ WRAP_GGO(clitkWarpImage_GGO_C clitkWarpImage.ggo)
+ ADD_EXECUTABLE(clitkWarpImage clitkWarpImage.cxx ${clitkWarpImage_GGO_C} clitkWarpImageGenericFilter.cxx)
+ TARGET_LINK_LIBRARIES(clitkWarpImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkWarpImage)
+
+ WRAP_GGO(clitkInvertVF_GGO_C clitkInvertVF.ggo)
+ ADD_EXECUTABLE(clitkInvertVF clitkInvertVF.cxx ${clitkInvertVF_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkInvertVF clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkInvertVF)
+
+ WRAP_GGO(clitkAffineTransform_GGO_C clitkAffineTransform.ggo)
+ ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx ${clitkAffineTransform_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAffineTransform)
+
+ WRAP_GGO(clitkElastixTransformToMatrix_GGO_C clitkElastixTransformToMatrix.ggo)
+ ADD_EXECUTABLE(clitkElastixTransformToMatrix clitkElastixTransformToMatrix.cxx ${clitkElastixTransformToMatrix_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkElastixTransformToMatrix clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkElastixTransformToMatrix)
+
+ WRAP_GGO(clitkMatrixToElastixTransform_GGO_C clitkMatrixToElastixTransform.ggo)
+ ADD_EXECUTABLE(clitkMatrixToElastixTransform clitkMatrixToElastixTransform.cxx ${clitkMatrixToElastixTransform_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixToElastixTransform clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixToElastixTransform)
+
+ WRAP_GGO(clitkMatrixMultiply_GGO_C clitkMatrixMultiply.ggo)
+ ADD_EXECUTABLE(clitkMatrixMultiply clitkMatrixMultiply.cxx ${clitkMatrixMultiply_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixMultiply clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixMultiply)
+
+ WRAP_GGO(clitkMatrixInverse_GGO_C clitkMatrixInverse.ggo)
+ ADD_EXECUTABLE(clitkMatrixInverse clitkMatrixInverse.cxx ${clitkMatrixInverse_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMatrixInverse clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMatrixInverse)
+
+ WRAP_GGO(clitkSetBackground_GGO_C clitkSetBackground.ggo)
+ ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx clitkSetBackgroundGenericFilter.cxx ${clitkSetBackground_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkSetBackground)
+
+ WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
+ ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
+
+ ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx)
+ TARGET_LINK_LIBRARIES(clitkImageArithm clitkImageArithmImageLib clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageArithm)
+
+ ADD_EXECUTABLE(clitkVectorArithm clitkVectorArithm.cxx)
+ TARGET_LINK_LIBRARIES(clitkVectorArithm clitkVectorArithmLib clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorArithm)
+
+ WRAP_GGO(clitkUnsharpMask_GGO_C clitkUnsharpMask.ggo)
+ ADD_EXECUTABLE(clitkUnsharpMask clitkUnsharpMask.cxx ${clitkUnsharpMask_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkUnsharpMask clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkUnsharpMask)
+
+ WRAP_GGO(clitkFooImage_GGO_C clitkFooImage.ggo)
+ ADD_EXECUTABLE(clitkFooImage clitkFooImage.cxx ${clitkFooImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkFooImage clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFooImage)
+
+ WRAP_GGO(clitkMedianImageFilter_GGO_C clitkMedianImageFilter.ggo)
+ ADD_EXECUTABLE(clitkMedianImageFilter clitkMedianImageFilter.cxx ${clitkMedianImageFilter_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMedianImageFilter clitkMedianImageFilterLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMedianImageFilter)
+
+ ADD_EXECUTABLE(clitkResampleImage clitkResampleImage.cxx)
+ TARGET_LINK_LIBRARIES(clitkResampleImage clitkResampleImageLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkResampleImage)
+
+ WRAP_GGO(clitkMinMaxMask_GGO_C clitkMinMaxMask.ggo)
+ ADD_EXECUTABLE(clitkMinMaxMask clitkMinMaxMask.cxx ${clitkMinMaxMask_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMinMaxMask clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMinMaxMask)
+
+ WRAP_GGO(clitkAutoCrop_GGO_C clitkAutoCrop.ggo)
+ ADD_EXECUTABLE(clitkAutoCrop clitkAutoCrop.cxx ${clitkAutoCrop_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkAutoCrop clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAutoCrop)
+
+ WRAP_GGO(clitkDicomRTStruct2Image_GGO_C clitkDicomRTStruct2Image.ggo)
+ ADD_EXECUTABLE(clitkDicomRTStruct2Image clitkDicomRTStruct2Image.cxx ${clitkDicomRTStruct2Image_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDicomRTStruct2Image clitkDicomRTStruct)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTStruct2Image)
+
+ IF(CLITK_USE_SYSTEM_GDCM)
+ WRAP_GGO(clitkImage2DicomRTStruct_GGO_C clitkImage2DicomRTStruct.ggo)
+ ADD_EXECUTABLE(clitkImage2DicomRTStruct clitkImage2DicomRTStruct.cxx ${clitkImage2DicomRTStruct_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImage2DicomRTStruct clitkDicomRTStruct)
+ ENDIF()
+
+ WRAP_GGO(clitkComposeVF_GGO_C clitkComposeVF.ggo)
+ ADD_EXECUTABLE(clitkComposeVF clitkComposeVFGenericFilter.cxx clitkComposeVF.cxx ${clitkComposeVF_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkComposeVF clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkComposeVF)
+
+ WRAP_GGO(clitkMergeSequence_GGO_C clitkMergeSequence.ggo)
+ ADD_EXECUTABLE(clitkMergeSequence clitkMergeSequence.cxx clitkMergeSequenceGenericFilter.cxx ${clitkMergeSequence_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMergeSequence clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeSequence)
+
+ WRAP_GGO(clitkBackProjectImage_GGO_C clitkBackProjectImage.ggo)
+ ADD_EXECUTABLE(clitkBackProjectImage clitkBackProjectImage.cxx clitkBackProjectImageGenericFilter.cxx ${clitkBackProjectImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkBackProjectImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBackProjectImage)
+
+ ADD_EXECUTABLE(clitkCropImage clitkCropImage.cxx ${clitkCropImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkCropImage clitkCropImageLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCropImage)
+
+ # WRAP_GGO(clitkExtractSlice_GGO_C clitkExtractSlice.ggo)
+ # ADD_EXECUTABLE(clitkExtractSlice clitkExtractSlice.cxx clitkExtractSliceGenericFilter.cxx ${clitkExtractSlice_GGO_C})
+ # TARGET_LINK_LIBRARIES(clitkExtractSlice clitkCommon)
+ #SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkExtractSlice)
+
+ WRAP_GGO(clitkFlipImage_GGO_C clitkFlipImage.ggo)
+ ADD_EXECUTABLE(clitkFlipImage clitkFlipImage.cxx clitkFlipImageGenericFilter.cxx ${clitkFlipImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkFlipImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkFlipImage)
+
+ WRAP_GGO(clitkMirrorPadImage_GGO_C clitkMirrorPadImage.ggo)
+ ADD_EXECUTABLE(clitkMirrorPadImage clitkMirrorPadImage.cxx clitkMirrorPadImageGenericFilter.cxx ${clitkMirrorPadImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMirrorPadImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMirrorPadImage)
+
+ WRAP_GGO(clitkImageMoment_GGO_C clitkImageMoment.ggo)
+ ADD_EXECUTABLE(clitkImageMoment clitkImageMoment.cxx clitkImageMomentGenericFilter.cxx ${clitkImageMoment_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageMoment clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageMoment)
+
+ WRAP_GGO(clitkImageStatistics_GGO_C clitkImageStatistics.ggo)
+ ADD_EXECUTABLE(clitkImageStatistics clitkImageStatistics.cxx clitkImageStatisticsGenericFilter.cxx ${clitkImageStatistics_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageStatistics clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageStatistics)
+
+ WRAP_GGO(clitkVFConvert_GGO_C clitkVFConvert.ggo)
+ ADD_EXECUTABLE(clitkVFConvert clitkVFConvert.cxx clitkVFConvertGenericFilter.cxx ${clitkVFConvert_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkVFConvert clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVFConvert)
+
+ WRAP_GGO(clitkImageToVectorImage_GGO_C clitkImageToVectorImage.ggo)
+ ADD_EXECUTABLE(clitkImageToVectorImage clitkImageToVectorImage.cxx clitkImageToVectorImageGenericFilter.cxx ${clitkImageToVectorImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageToVectorImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageToVectorImage)
+
+ WRAP_GGO(clitkVectorImageToImage_GGO_C clitkVectorImageToImage.ggo)
+ ADD_EXECUTABLE(clitkVectorImageToImage clitkVectorImageToImage.cxx clitkVectorImageToImageGenericFilter.cxx ${clitkVectorImageToImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkVectorImageToImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkVectorImageToImage)
+
+ ADD_EXECUTABLE(clitkMIP clitkMIP.cxx clitkMIPGenericFilter.cxx)
+ TARGET_LINK_LIBRARIES(clitkMIP clitkMIPLib clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMIP)
+
+ WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
+ ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkTransformLandmarks)
+
+ WRAP_GGO(clitkMaskLandmarks_GGO_C clitkMaskLandmarks.ggo)
+ ADD_EXECUTABLE(clitkMaskLandmarks clitkMaskLandmarks.cxx ${clitkMaskLandmarks_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMaskLandmarks clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMaskLandmarks)
-SET(clitkGGO_SRC
- clitkImageResample_ggo.c
- )
+ WRAP_GGO(clitkJacobianImage_GGO_C clitkJacobianImage.ggo)
+ ADD_EXECUTABLE(clitkJacobianImage clitkJacobianImage.cxx clitkJacobianImageGenericFilter.cxx ${clitkJacobianImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkJacobianImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkJacobianImage)
-ADD_LIBRARY(clitkGGO STATIC ${clitkGGO_SRC})
+ WRAP_GGO(clitkPadImage_GGO_C clitkPadImage.ggo)
+ ADD_EXECUTABLE(clitkPadImage clitkPadImage.cxx clitkPadImageGenericFilter.cxx ${clitkPadImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkPadImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
-ADD_EXECUTABLE(clitkDicomInfo clitkDicomInfo.cxx clitkDicomInfo_ggo.c)
-TARGET_LINK_LIBRARIES(clitkDicomInfo clitkCommon ITKIO)
+ WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
+ ADD_EXECUTABLE(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkCatImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
-ADD_EXECUTABLE(clitkImageInfo clitkImageInfo.cxx clitkImageInfo_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageInfo clitkCommon ITKIO)
+ WRAP_GGO(clitkAnisotropicDiffusion_GGO_C clitkAnisotropicDiffusion.ggo)
+ ADD_EXECUTABLE(clitkAnisotropicDiffusion clitkAnisotropicDiffusion.cxx
+ clitkAnisotropicDiffusionGenericFilter.cxx
+ ${clitkAnisotropicDiffusion_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkAnisotropicDiffusion clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkAnisotropicDiffusion)
-ADD_EXECUTABLE(clitkImageConvert clitkImageConvert.cxx clitkImageConvert_ggo.c )
-TARGET_LINK_LIBRARIES(clitkImageConvert clitkCommon ITKIO clitkFilters)
+ WRAP_GGO(clitkChangeImageInfo_GGO_C clitkChangeImageInfo.ggo)
+ ADD_EXECUTABLE(clitkChangeImageInfo clitkChangeImageInfo.cxx
+ clitkChangeImageInfoGenericFilter.cxx
+ ${clitkChangeImageInfo_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkChangeImageInfo clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkChangeImageInfo)
-ADD_EXECUTABLE(clitkImageResample clitkImageResample.cxx clitkImageResample_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageResample clitkCommon ITKIO clitkFilters)
+ WRAP_GGO(clitkMergeAsciiDoseActor_GGO_C clitkMergeAsciiDoseActor.ggo)
+ ADD_EXECUTABLE(clitkMergeAsciiDoseActor clitkMergeAsciiDoseActor.cxx ${clitkMergeAsciiDoseActor_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMergeAsciiDoseActor ITKCommon clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeAsciiDoseActor)
-ADD_EXECUTABLE(clitkVFResample clitkVFResample.cxx clitkImageResample_ggo.c)
-TARGET_LINK_LIBRARIES(clitkVFResample clitkCommon ITKIO clitkFilters)
+ WRAP_GGO(clitkImageUncertainty_GGO_C clitkImageUncertainty.ggo)
+ ADD_EXECUTABLE(clitkImageUncertainty clitkImageUncertainty.cxx clitkImageUncertainty_ggo.c)
+ TARGET_LINK_LIBRARIES(clitkImageUncertainty clitkCommon ${ITK_LIBRARIES})
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageUncertainty)
-ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx clitkImageArithm_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageArithm clitkCommon ITKIO ITKStatistics clitkFilters)
+ WRAP_GGO(clitkNormalizeImageFilter_GGO_C clitkNormalizeImageFilter.ggo)
+ ADD_EXECUTABLE(clitkNormalizeImageFilter clitkNormalizeImageFilter.cxx ${clitkNormalizeImageFilter_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkNormalizeImageFilter clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkNormalizeImageFilter)
-ADD_EXECUTABLE(clitkImageCreate clitkImageCreate.cxx clitkImageCreate_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageCreate clitkCommon ITKStatistics ITKIO)
+ WRAP_GGO(clitkImageGradientMagnitude_GGO_C clitkImageGradientMagnitude.ggo)
+ ADD_EXECUTABLE(clitkImageGradientMagnitude clitkImageGradientMagnitude.cxx ${clitkImageGradientMagnitude_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageGradientMagnitude clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageGradientMagnitude)
-ADD_EXECUTABLE(clitkImageFillRegion clitkImageFillRegion.cxx clitkImageFillRegion_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageFillRegion clitkCommon
-ITKIO ITKStatistics clitkFilters)
+ WRAP_GGO(clitkImageLaplacian_GGO_C clitkImageLaplacian.ggo)
+ ADD_EXECUTABLE(clitkImageLaplacian clitkImageLaplacian.cxx ${clitkImageLaplacian_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageLaplacian clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageLaplacian)
-ADD_EXECUTABLE(clitkZeroVF clitkZeroVF.cxx clitkZeroVF_ggo.c
-clitkZeroVFGenericFilter.cxx)
-TARGET_LINK_LIBRARIES(clitkZeroVF clitkCommon ITKStatistics ITKIO )
+ WRAP_GGO(clitkImageIntensityWindowing_GGO_C clitkImageIntensityWindowing.ggo)
+ ADD_EXECUTABLE(clitkImageIntensityWindowing clitkImageIntensityWindowing.cxx ${clitkImageIntensityWindowing_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkImageIntensityWindowing clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkImageIntensityWindowing)
-ADD_EXECUTABLE(clitkImageExtractLine clitkImageExtractLine.cxx clitkImageExtractLine_ggo.c)
-TARGET_LINK_LIBRARIES(clitkImageExtractLine clitkCommon ITKStatistics ITKIO)
+ WRAP_GGO(clitkBlurImage_GGO_C clitkBlurImage.ggo)
+ ADD_EXECUTABLE(clitkBlurImage clitkBlurImage.cxx ${clitkBlurImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkBlurImage clitkCommon )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBlurImage)
-ADD_EXECUTABLE(clitkSplitImage clitkSplitImage.cxx clitkSplitImage_ggo.c
- )
-TARGET_LINK_LIBRARIES(clitkSplitImage ITKBasicFilters clitkCommon ITKIO
-clitkFilters)
+ #=========================================================
+ option(CLITK_USE_ROOT "Build experimental tools using root" OFF)
+ if (CLITK_USE_ROOT)
+ FIND_PACKAGE(ROOT REQUIRED)
+ if(ROOT_FOUND)
+ MESSAGE(STATUS "ROOT found : ${ROOT_LIBRARY_DIR} ${ROOT_INCLUDE_DIR} ${ROOT_LIBRARIES}")
+ ELSE(ROOT_FOUND)
+ MESSAGE(FATAL_ERROR
+ "Cannot build without ROOT. Please set ROOTSYS environement variable.")
+ endif(ROOT_FOUND)
+ INCLUDE_DIRECTORIES(${ROOT_INCLUDE_DIR})
+ LINK_DIRECTORIES(${ROOT_LIBRARY_DIR})
+ WRAP_GGO(clitkMergeRootFiles_GGO_C clitkMergeRootFiles.ggo)
+ ADD_EXECUTABLE(clitkMergeRootFiles clitkMergeRootFiles.cxx GateMergeManager.cc ${clitkMergeRootFiles_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMergeRootFiles ${ROOT_LIBRARIES})
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMergeRootFiles)
+ endif()
+ #=========================================================
-ADD_EXECUTABLE(clitkVFMerge clitkVFMerge.cxx clitkVFMerge_ggo.c)
-TARGET_LINK_LIBRARIES(clitkVFMerge ITKBasicFilters clitkCommon ITKIO )
-ADD_EXECUTABLE(clitkWriteDicomSeries clitkWriteDicomSeries.cxx clitkWriteDicomSeries_ggo.c)
-TARGET_LINK_LIBRARIES(clitkWriteDicomSeries clitkCommon ITKIO clitkFilters)
+ #=========================================================
+ IF(CLITK_EXPERIMENTAL)
+ WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
+ ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
-ADD_EXECUTABLE(clitkAverageTemporalDimension clitkAverageTemporalDimension.cxx clitkAverageTemporalDimension_ggo.c)
-TARGET_LINK_LIBRARIES(clitkAverageTemporalDimension clitkCommon ITKIO
-clitkFilters)
+ WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
+ ADD_EXECUTABLE(clitkMeshToBinaryImage clitkMeshToBinaryImage.cxx ${clitkMeshToBinaryImage_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMeshToBinaryImage clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshToBinaryImage)
-ADD_EXECUTABLE(clitkWarpImage clitkWarpImage.cxx clitkWarpImage_ggo.c
-clitkWarpImageGenericFilter.cxx)
-TARGET_LINK_LIBRARIES(clitkWarpImage ITKBasicFilters clitkCommon ITKIO
-)
+ WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
+ ADD_EXECUTABLE(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkMeshViewer clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
+ ENDIF(CLITK_EXPERIMENTAL)
+ #=========================================================
-ADD_EXECUTABLE(clitkInvertVF clitkInvertVF.cxx clitkInvertVF_ggo.c)
-TARGET_LINK_LIBRARIES(clitkInvertVF clitkCommon ITKIO clitkFilters)
-ADD_EXECUTABLE(clitkAffineTransform clitkAffineTransform.cxx clitkAffineTransform_ggo.c)
-TARGET_LINK_LIBRARIES(clitkAffineTransform clitkCommon ITKIO clitkFilters)
+ #=========================================================
+ IF(ITK_VERSION_MAJOR VERSION_LESS 4)
+ MESSAGE("clitkDice is not compatible with ITK<4. It will not be built.")
+ MESSAGE("clitkDicomRTPlan2Gate is not compatible with GDCM<2 (ITK<4). It will not be built.")
+ ELSE(ITK_VERSION_MAJOR VERSION_LESS 4)
+ WRAP_GGO(clitkDice_GGO_C clitkDice.ggo)
+ ADD_EXECUTABLE(clitkDice clitkDice.cxx ${clitkDice_GGO_C})
+ TARGET_LINK_LIBRARIES(clitkDice clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDice)
-#ADD_EXECUTABLE(clitkSignalMeanPositionTracking clitkSignalMeanPositionTracking.cxx clitkSignalMeanPositionFilter.cxx clitkEllipse.cxx clitkSignalMeanPositionTracking_ggo.c)
-#TARGET_LINK_LIBRARIES(clitkSignalMeanPositionTracking clitkCommon ITKIO fftw3)
-#
-#ADD_EXECUTABLE(clitkSignalFilter clitkSignalFilter.cxx clitkSignalFilter_ggo.c)
-#TARGET_LINK_LIBRARIES(clitkSignalFilter clitkCommon ITKIO fftw3)
+ WRAP_GGO(clitkDicomRTPlan2Gate_GGO_C clitkDicomRTPlan2Gate.ggo)
+ ADD_EXECUTABLE(clitkDicomRTPlan2Gate clitkDicomRTPlan2Gate.cxx clitkDicomRTPlan2Gate_ggo.c)
+ TARGET_LINK_LIBRARIES(clitkDicomRTPlan2Gate clitkCommon)
+ SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkDicomRTPlan2Gate)
+ ENDIF(ITK_VERSION_MAJOR VERSION_LESS 4)
+ #=========================================================
-ADD_EXECUTABLE(clitkSetBackground clitkSetBackground.cxx
-clitkSetBackgroundGenericFilter.cxx clitkSetBackground_ggo.c)
-TARGET_LINK_LIBRARIES(clitkSetBackground clitkCommon ITKIO )
-ADD_EXECUTABLE(clitkGuerreroVentilation clitkGuerreroVentilation.cxx
- clitkGuerreroVentilation_ggo.c
-)
-TARGET_LINK_LIBRARIES(clitkGuerreroVentilation clitkCommon ITKIO ITKBasicFilters
-clitkFilters)
+ INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
-ADD_EXECUTABLE(clitkBinarizeImage clitkBinarizeImage.cxx)
-TARGET_LINK_LIBRARIES(clitkBinarizeImage clitkCommon ITKIO clitkFilters)
+ENDIF(CLITK_BUILD_TOOLS)
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff