Convert coeffs to VF with itk bspline

[clitk.git] / tools / CMakeLists.txt

diff --git a/tools/CMakeLists.txt b/tools/CMakeLists.txt
index 5222f12b9650d8d0ba9e42fca6b5f3530d942d34..a201e18144dffd14f59c1bf05bac32006843a1db 100644 (file)
--- a/tools/CMakeLists.txt
+++ b/tools/CMakeLists.txt
@@ -1,7 +1,3 @@
-#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
-#=========================================================
-
 # Add Libraries used in vv and clitk to avoid recompilation
 WRAP_GGO(clitkCropImage_GGO_C clitkCropImage.ggo)
 ADD_LIBRARY(clitkCropImageLib clitkCropImageGenericFilter.cxx ${clitkCropImage_GGO_C})
@@ -126,7 +122,7 @@ IF (CLITK_BUILD_TOOLS)
 
   WRAP_GGO(clitkGammaIndex_GGO_C clitkGammaIndex.ggo)
   ADD_EXECUTABLE(clitkGammaIndex clitkGammaIndex.cxx ${clitkGammaIndex_GGO_C})
-  TARGET_LINK_LIBRARIES(clitkGammaIndex vtkCommon vtkFiltering vtkGraphics vtkIO vtkImaging)
+  TARGET_LINK_LIBRARIES(clitkGammaIndex clitkCommon ${VTK_LIBRARIES} ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkGammaIndex)
 
   ADD_EXECUTABLE(clitkImageArithm clitkImageArithm.cxx)
@@ -315,6 +311,26 @@ IF (CLITK_BUILD_TOOLS)
   TARGET_LINK_LIBRARIES(clitkRelativePosition clitkCommon ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePosition)
 
+  WRAP_GGO(clitkLabelImageOverlapMeasure_GGO_C clitkLabelImageOverlapMeasure.ggo)
+  ADD_EXECUTABLE(clitkLabelImageOverlapMeasure clitkLabelImageOverlapMeasure.cxx ${clitkLabelImageOverlapMeasure_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkLabelImageOverlapMeasure clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES} )
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkLabelImageOverlapMeasure)
+
+  WRAP_GGO(clitkRelativePositionAnalyzer_GGO_C clitkRelativePositionAnalyzer.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionAnalyzer.cxx ${clitkRelativePositionAnalyzer_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionAnalyzer)
+
+  WRAP_GGO(clitkRelativePositionDataBaseAnalyzer_GGO_C clitkRelativePositionDataBaseAnalyzer.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionDataBaseAnalyzer ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseAnalyzer.cxx ${clitkRelativePositionDataBaseAnalyzer_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseAnalyzer clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseAnalyzer)
+
+  WRAP_GGO(clitkRelativePositionDataBaseBuilder_GGO_C clitkRelativePositionDataBaseBuilder.ggo)
+  ADD_EXECUTABLE(clitkRelativePositionDataBaseBuilder ../itk/clitkRelativePositionDataBase.cxx clitkRelativePositionDataBaseBuilder.cxx ${clitkRelativePositionDataBaseBuilder_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkRelativePositionDataBaseBuilder clitkSegmentationGgoLib clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkRelativePositionDataBaseBuilder)
+
   WRAP_GGO(clitkTransformLandmarks_GGO_C clitkTransformLandmarks.ggo)
   ADD_EXECUTABLE(clitkTransformLandmarks clitkTransformLandmarks.cxx ${clitkTransformLandmarks_GGO_C})
   TARGET_LINK_LIBRARIES(clitkTransformLandmarks clitkCommon ${ITK_LIBRARIES})
@@ -339,11 +355,20 @@ IF (CLITK_BUILD_TOOLS)
   TARGET_LINK_LIBRARIES(clitkPadImage clitkCommon ${ITK_LIBRARIES})
   SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkPadImage)
 
-  IF(CLITK_EXPERIMENTAL)
+  WRAP_GGO(clitkCatImage_GGO_C clitkCatImage.ggo)
+  ADD_EXECUTABLE(clitkCatImage clitkCatImage.cxx ${clitkCatImage_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkCatImage clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCatImage)
 
+  WRAP_GGO(clitkCoeffsToDVF_GGO_C clitkCoeffsToDVF.ggo)
+  ADD_EXECUTABLE(clitkCoeffsToDVF clitkCoeffsToDVF.cxx ${clitkCoeffsToDVF_GGO_C})
+  TARGET_LINK_LIBRARIES(clitkCoeffsToDVF clitkCommon ${ITK_LIBRARIES})
+  SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkCoeffsToDVF)
+
+  IF(CLITK_EXPERIMENTAL)
     WRAP_GGO(clitkBinaryImageToMesh_GGO_C clitkBinaryImageToMesh.ggo)
     ADD_EXECUTABLE(clitkBinaryImageToMesh clitkBinaryImageToMesh.cxx ${clitkBinaryImageToMesh_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh ${ITK_LIBRARIES} vtkCommon vtkRendering)
+    TARGET_LINK_LIBRARIES(clitkBinaryImageToMesh ${ITK_LIBRARIES} ${VTK_LIBRARIES})
     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkBinaryImageToMesh)
 
     WRAP_GGO(clitkMeshToBinaryImage_GGO_C clitkMeshToBinaryImage.ggo)
@@ -353,12 +378,12 @@ IF (CLITK_BUILD_TOOLS)
 
     WRAP_GGO(clitkMeshViewer_GGO_C clitkMeshViewer.ggo)
     ADD_EXECUTABLE(clitkMeshViewer clitkMeshViewer.cxx ${clitkMeshViewer_GGO_C})
-    TARGET_LINK_LIBRARIES(clitkMeshViewer vtkCommon vtkRendering)
+    TARGET_LINK_LIBRARIES(clitkMeshViewer ${VTK_LIBRARIES})
     SET(TOOLS_INSTALL ${TOOLS_INSTALL} clitkMeshViewer)
   ENDIF(CLITK_EXPERIMENTAL)
 
   SET_TARGET_PROPERTIES(${TOOLS_INSTALL} PROPERTIES INSTALL_RPATH "${VTK_DIR}:${ITK_DIR}" )  
-  INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
+  INSTALL (TARGETS ${TOOLS_INSTALL} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)
 
 ENDIF(CLITK_BUILD_TOOLS)