#include "clitkDicomRTStruct2ImageFilter.h"
#include "clitkDicomRT_StructureSet.h"
#include "clitkDicomRTStruct2Image_ggo.h"
+#include "clitkIO.h"
//--------------------------------------------------------------------
int main(int argc, char * argv[]) {
// Init command line
GGO(clitkDicomRTStruct2Image, args_info);
+ CLITK_INIT;
// Read and display information
clitk::DicomRT_StructureSet::Pointer s = clitk::DicomRT_StructureSet::New();
clitk::DicomRTStruct2ImageFilter filter;
filter.SetCropMaskEnabled(args_info.crop_flag);
filter.SetImageFilename(args_info.image_arg); // Used to get spacing + origin
+ if (args_info.vtk_flag) {
+ filter.SetWriteMesh(true);
+ }
if (args_info.roiName_given) {
filter.SetROI(s->GetROIFromROIName(args_info.roiName_arg));
filter.SetOutputImageFilename(args_info.output_arg);
filter.SetROI(roi);
filter.SetCropMaskEnabled(args_info.crop_flag);
filter.SetImageFilename(args_info.image_arg); // Used to get spacing + origin
+ if (args_info.vtk_flag) {
+ filter.SetWriteMesh(true);
+ }
name.erase(remove_if(name.begin(), name.end(), isspace), name.end());
- std::string n = std::string(args_info.output_arg).append
- (clitk::toString(num)).append
- ("_").append
- (name).append
- (".mhd");
+ std::string n;
+ if (args_info.mha_flag) {
+ n = std::string(args_info.output_arg).append
+ (clitk::toString(num)).append
+ ("_").append
+ (name).append
+ (".mha");
+ }
+ else {
+ n = std::string(args_info.output_arg).append
+ (clitk::toString(num)).append
+ ("_").append
+ (name).append
+ (".mhd");
+ }
if (args_info.verbose_flag) {
std::cout << num << " " << roi->GetName() << " num=" << num << " : " << n << std::endl;
}