Merge branch 'master' into vectorImage

[clitk.git] / tools / clitkImage2DicomRTStruct.ggo

diff --git a/tools/clitkImage2DicomRTStruct.ggo b/tools/clitkImage2DicomRTStruct.ggo
index 68334b1f9f0a2449142d47db91da8fce25f51511..7416d32b5c40fdf911258d5d742b7fb0933c9c20 100644 (file)
--- a/tools/clitkImage2DicomRTStruct.ggo
+++ b/tools/clitkImage2DicomRTStruct.ggo
@@ -1,20 +1,16 @@
 # file clitkImage2DicomRTStruct.ggo
 package "clitk"
-version "Convert (binary) image to DICOM RT Structure Set (contours)"
+version "Add a (binary) image inside a DICOM RT Structure Set (contours)"
 
 option "config"                 - "Config file"                     string     no
 option "verbose"         v "Verbose"                        flag       off
 
-option "input"          i "Input image file (binary image"  string     yes
-option "output"                 o "Output DicomRT filename"         string     yes
+option "input"          i "Input image file (binary image) to be converted into contours"  string multiple yes
+option "rtstruct"       r "Input rt struct"                  string    yes
+option "dicom"          d "Input folder where the initial dicom ct is"                 string  yes
+option "output"                 o "Output DicomRT filename"          string    yes
 
-
-# option "image"                j "Used to read image info (spacing, origin)"    string        yes
-# option "roi"          r "ROI to binarize (if -1 = all roi)"            int    no default="-1"
-
-# option "crop"                 c "Crop binary mask"            flag off
-
-#option "roi"           r "ROI to print (ID)"           int            no
-#option "contour"       c "contour to print (ID)"       int            no
-#option "offset"                o "to display points as image offsets" flag    off
+option "threshold"       t "Threshold for binary image"                         float   no default = "0.5"
+option "skip"           s "Do not write in output the structures that was in input"   flag off
+option "roitype"        - "Name of the type of roi added into the rt-struct"   string  no default = "ORGAN"