Change itk version for travis from v5.0b01 to v5.0rc01

[clitk.git] / tools / clitkImageStatistics.ggo

diff --git a/tools/clitkImageStatistics.ggo b/tools/clitkImageStatistics.ggo
old mode 100755 (executable)
new mode 100644 (file)
index 863dfbd..60d451a
--- a/tools/clitkImageStatistics.ggo
+++ b/tools/clitkImageStatistics.ggo
@@ -1,15 +1,21 @@
 #File clitkImageStatistics.ggo
 package "clitkImageStatistics"
-version "1.0"
-purpose "Compute statistics on an image, or on part of an image specified by a mask and label(s)"
+version "2.0"
+#This tool supports multiple images on the input, or even 4D, but all images must be of the same type and dimensions. 
+purpose "Compute statistics on an image, or on part of an image specified by a mask and label(s). The tool also supports multichannel images, which is useful, e.g., for vector fields. All channels are processed (separately) by default, but only one channel may be chosen."
 
-option "config"                -       "Config file"                     string        no
-option "verbose"       v       "Verbose"                         flag          off
+option "config"       - "Config file"                                                         string  no
+option "verbose"      v "Verbose"                                                             flag    off
 
-option "input"         i       "Input image filename"            string        yes
-option "mask"          m       "Mask image filename (uchar)"             string        no
-option "label"         l       "Label(s) in the mask image to consider"        int     no      multiple        default="1"
-option "histogram"     -       "Compute histogram, allows median calculation"  string  no
-option "bins"          -       "Number of histogram bins"                      int     no      default="100"
-option "lower"         -       "Lower histogram bound" double  no default="-1000"      
-option "upper"         -       "Upper histogram bound" double  no default="1000"               
+option "input"        i "Input image filename"                                                string  no  multiple
+option "channel"      c "Image channel to be used in statistics (-1 to process all channels)" int     no  default="-1"
+option "mask"         m "Mask image filename (uchar)"                                         string  no
+option "label"        l "Label(s) in the mask image to consider"                              int     no  multiple     default="1"
+option "localize"     - "With verbose, write the index coordinates of the max and min"        flag    off
+option "histogram"    - "Compute histogram, allows median calculation"                        string  no
+option "dvhistogram"  - "Compute dose volume histogram"                                       string  no
+option "bins"         - "Number of histogram bins"                                            int     no  default="100"
+option "lower"        - "Lower histogram bound"                                               double  no  default="-1000"
+option "upper"        - "Upper histogram bound"                                               double  no  default="1000"
+
+option "allow_resize" r "Resize mask if different from input"                                 flag    off