Program: gdcm
Module: $RCSfile: test4DSplitter.cxx,v $
Language: C++
- Date: $Date: 2011/04/08 00:11:36 $
- Version: $Revision: 1.4 $
+ Date: $Date: 2011/09/20 16:09:05 $
+ Version: $Revision: 1.8 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
the same time.
*/
-
#include "gdcmFile.h"
#include "gdcmSerieHelper.h"
#include <vtkImageData.h>
bool myCompareFunction(GDCM_NAME_SPACE::File *file1, GDCM_NAME_SPACE::File *file2)
{
return atof(file1->GetEntryString(0x0018,0x1060).c_str()) < atof(file2->GetEntryString(0x0018,0x1060).c_str());
+ }
+
+bool myCompareFunction0008_0032(GDCM_NAME_SPACE::File *file1, GDCM_NAME_SPACE::File *file2)
+ {
+ return atof(file1->GetEntryString(0x0008,0x0032).c_str()) < atof(file2->GetEntryString(0x0008,0x0032).c_str());
}
-
int main(int argc, char *argv[])
{
- std::cout << "... inside " << argv[0] << std::endl;
+ std::cout << "... inside : " << argv[0] << std::endl;
// 3D
//std::string strDirName("/home/jpr/Desktop/Patients_Emilie/Patient.3T/AUB Jos/AUBERTIN JOSEPH/PROSTATE - 305629373/dSSh_DWISENSE_602");
// 4D
-std::string strDirName("/home/jpr/Desktop/Patients_Emilie/Patient.3T/AUB Jos/AUBERTIN JOSEPH/PROSTATE - 305629373/DYN7INJDYN6_901");
-
+//std::string strDirName("/home/jpr/Desktop/Patients_Emilie/Patient.3T/AUB Jos/AUBERTIN JOSEPH/PROSTATE - 305629373/DYN7INJDYN6_901");
+// n directories
+std::string strDirName("/home/jpr/Desktop/patient Andrei Dyn/dyn");
+//std::string strDirName("/home/jpr/Desktop/patient Andrei Dyn/dyn2"); // very small sample
// ----- Begin Processing -----
unsigned short int grSplit;
// en sortie, chaque vtkImageData contiendra une coupe au cours du temps
// n * 2D+T
-std::vector<vtkImageData*> *output;
+ std::vector<vtkImageData*> *output;
+ std::vector<vtkImageData*>::iterator it;
+
+// ========================================
+// Split on Position (IPP)
+// Sort on UserFunction (use 0008|0032 : Aquisition Time )
+//
+// Should give a vector of 2D+T vtkImageData*
+// ========================================
+
+//vtkGdcm4DSplitter *spl = new vtkGdcm4DSplitter();
+
+if (1) {
+
+ std::cout << "Try with : Split on Position (IPP) / Sort on UserFunction (use 0008|0032 : Aquisition Time )" << std::endl;
- if (1) {
vtkGdcm4DSplitter *spl = new vtkGdcm4DSplitter();
+ spl->setFlipY(false);
spl->setDirName(strDirName);
- spl->setRecursive(false);
+ spl->setRecursive(true);
+
spl->setSplitOnPosition();
- //spl->setSplitOnOrientation();
- // Time triger : 0018|1060
- grSort=0x0018;
- elSort=0x1060;
- // ==> Big troubles with SortOnTag
- //spl->setSortOnTag(grSort, elSort);
- //spl->setSortConvertToFloat(true);
+ // Time triger : 0018|1060
+ //grSort=0x0018;
+ //elSort=0x1060;
// ==> use SortOnUserFunction !
- spl->setSortOnUserFunction(myCompareFunction);
+ spl->setSortOnUserFunction(myCompareFunction0008_0032);
std::cout << "Everything set" << std::endl;
bool res=spl->Go();
}
output = spl->GetImageDataVector();
-}
std::cout << "--------------------------------" << std::endl;
std::cout << "Vector size " << output->size() << std::endl;
std::cout << "--------------------------------" << std::endl;
+// Print the first one (why not?)
//(*output)[0]->PrintSelf(std::cout, vtkIndent(2));
-std::vector<vtkImageData*>::iterator it;
+ for(it=output->begin(); it!=output->end(); ++it) {
+ //std::cout << "========================================" << std::endl;
+ //(*it)->PrintSelf(std::cout, vtkIndent(2));
+ }
+
+ delete spl;
+
+ // To please valgring
+ std::vector<vtkImageData*>::iterator it2;
+ for ( it2 = output->begin(); // for each vtkImageData*
+ it2 != output->end();
+ ++it2)
+ {
+ (*it2)->Delete(); // delete vtkImageData
+ }
+ delete output;
+}
+
+
+for(int i=0; i<3; i++)
+ std::cout << "---------------------------------------------" << std::endl;
+
+
+
+// ========================================
+// Split on Tag 0008|0032 (Aquisition Time)
+// Sort on Position (IPP)
+//
+// Should give a vector of 'true 3D' vtkImageData*
+// ========================================
+
+ if (1) {
+
+ std::cout << "Try with : Split on Tag 0008|0032 (Aquisition Time) / Sort on Position (IPP)" << std::endl;
+
+ vtkGdcm4DSplitter *spl = new vtkGdcm4DSplitter();
+ spl->setFlipY(false);
+ spl->setDirName(strDirName);
+ spl->setRecursive(true);
+
+ // Time triger : 0018|1060
+ //grSort=0x0018;
+ //elSort=0x1060;
+
+ // Aquisition Time : 0008|0032
+ spl->setSplitOnTag(0x0008, 0x0032);
+
+ spl->setSortOnPosition();
+
+ std::cout << "Everything set" << std::endl;
+ bool res=spl->Go();
+
+ std::cout << "GO() done, status " << res << std::endl;
+ if(!res)
+ {
+ std::cout << "plantage!" << std::endl;
+ }
+
+ output = spl->GetImageDataVector();
+
+
+std::cout << "--------------------------------" << std::endl;
+std::cout << "Vector size " << output->size() << std::endl;
+std::cout << "--------------------------------" << std::endl;
+
// Print the first one (why not?)
- for(it=output->begin(); it!=output->end(); ++it) {
- std::cout << "========================================" << std::endl;
- (*it)->PrintSelf(std::cout, vtkIndent(2));
- }
+//(*output)[0]->PrintSelf(std::cout, vtkIndent(2));
+
+
+ for(it=output->begin(); it!=output->end(); ++it) {
+ //std::cout << "========================================" << std::endl;
+ //(*it)->PrintSelf(std::cout, vtkIndent(2));
+ }
+
+ delete spl;
+
+ // To please valgring
+ std::vector<vtkImageData*>::iterator it2;
+ for ( it2 = output->begin(); // for each vtkImageData*
+ it2 != output->end();
+ ++it2)
+ {
+ (*it2)->Delete(); // delete vtkImageData
+ }
+ delete output;
+}
// Pour un directory '4D'
// en sortie, chaque vtkImageData contiendra un volume au cours du temps.
// 3D + T
-}
-
-
+}
git://git.creatis.insa-lyon.fr / gdcm.git / blobdiff