Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

[clitk.git] / vv / vvMainWindow.cxx

diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx
index ddc38fba97e5be92d50da869c7386002f346bec3..3add36d466e4e116c146310286b8e3ea9578b8a4 100644 (file)
--- a/vv/vvMainWindow.cxx
+++ b/vv/vvMainWindow.cxx
@@ -100,12 +100,13 @@
 #define COLUMN_RELOAD_IMAGE 6
 #define COLUMN_IMAGE_NAME 7
 
-#if CLITK_PRIVATE_FEATURES
-  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.usf)"
+#ifdef CLITK_PRIVATE_FEATURES
+#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz *.usf)"
 #else
-  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan)"
+#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.nii.gz)"
 #endif
 
+
 /*Data Tree values
   0,Qt::UserRole full filename
   1,Qt::CheckStateRole checkbutton UL View
@@ -703,51 +704,8 @@ void vvMainWindow::MergeImagesWithTime()
   mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
   std::vector<std::string> vector;
 
-  unsigned int currentDim = 0;
-  std::vector<double> currentSpacing;
-  std::vector<int> currentSize;
-  std::vector<double> currentOrigin;
-
-  for (int i = 0; i < files.size(); i++) {
-    itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
-                                         files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode);
-    if (reader) {
-      reader->SetFileName(files[i].toStdString().c_str());
-      reader->ReadImageInformation();
-      if (i == 0)
-        currentDim = reader->GetNumberOfDimensions();
-      bool IsOk = true;
-      for (unsigned int j = 0; j < currentDim; j++) {
-        if (i == 0) {
-          if (j == 0) {
-            currentSpacing.resize(currentDim);
-            currentSize.resize(currentDim);
-            currentOrigin.resize(currentDim);
-          }
-          currentOrigin[j] = reader->GetOrigin(j);
-          currentSpacing[j] = reader->GetSpacing(j);
-          currentSize[j] = reader->GetDimensions(j);
-        } else if (currentDim != reader->GetNumberOfDimensions()
-                   || currentSpacing[j] != reader->GetSpacing(j)
-                   || currentSize[j] != (int)reader->GetDimensions(j)
-                   || currentOrigin[j] != reader->GetOrigin(j)) {
-          QString error = "Cannot read file (too different from others ";
-          error += files[i].toStdString().c_str();
-          QMessageBox::information(this,tr("Reading problem"),error);
-          IsOk = false;
-          break;
-        }
-      }
-      if (IsOk)
-        vector.push_back(files[i].toStdString());
-    } else {
-      QString error = "Cannot read file info for ";
-      error += files[i].toStdString().c_str();
-      error += "\n";
-      error += "Maybe you're trying to open an image in an unsupported format?\n";
-      QMessageBox::information(this,tr("Reading problem"),error);
-    }
-  }
+  for (int i = 0; i < files.size(); i++)
+    vector.push_back(files[i].toStdString());
   sort(vector.begin(),vector.end());
   if (vector.size() > 1)
     LoadImages(vector, vvImageReader::MERGEDWITHTIME);
@@ -2158,7 +2116,18 @@ void vvMainWindow::AddFusionImage(int index, QString file)
     QMessageBox::information(this,tr("Problem reading Fusion !"),"File doesn't exist!");
 }
 //------------------------------------------------------------------------------
-
+//------------------------------------------------------------------------------
+void vvMainWindow::AddLandmarks(int index, QString file)
+{
+  if (QFile::exists(file))
+  {
+    landmarksPanel->LoadFromFile(file.toStdString());
+    landmarksPanel->SetCurrentPath(mInputPathName.toStdString());
+    landmarksPanel->SetCurrentImage(mSlicerManagers[index]->GetFileName().c_str());
+  }
+  else
+    QMessageBox::information(this,tr("Problem reading Landmarks !"),"File doesn't exist!");
+}
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenField()
@@ -2176,7 +2145,11 @@ void vvMainWindow::OpenField()
 
   QString Extensions = "Images ( *.mhd)";
   Extensions += ";;Images ( *.mha)";
-  Extensions += ";;Images ( *.vf)";
+  Extensions += ";;VF Images ( *.vf)";
+  Extensions += ";;nii Images ( *.nii)";
+  Extensions += ";;nrrd Images ( *.nrrd)";
+  Extensions += ";;nhdr Images ( *.nhdr)";
+  Extensions += ";;All Files (*)";
   QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions);
   if (!file.isEmpty())
     AddField(file,index);
@@ -3070,6 +3043,12 @@ void vvMainWindow::ShowLastImage()
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateRenderWindows()
 {
+  for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+    mSlicerManagers[i]->GetSlicer(0)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(1)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(2)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(3)->UpdateLandmarks();
+  }
   if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render();
   if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render();
   if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render();