Added mha next to mhd (similar but in one file)

[clitk.git] / vv / vvMainWindow.cxx

diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx
index c3465c19f8a7d7276c0f51894efb304d6cc5223c..3d8c51a5a78f2ed85a0e61bc293a9599b7f584c4 100644 (file)
--- a/vv/vvMainWindow.cxx
+++ b/vv/vvMainWindow.cxx
@@ -160,6 +160,11 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
   connect(actionAdd_fusion_image,SIGNAL(triggered()),this,SLOT(SelectFusionImage()));
   contextActions.push_back(actionAdd_fusion_image);
 
+  contextMenu.addSeparator();
+  QAction* actionResetMatrix = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/identity.png")),
+                                                      tr("Reset transformation to identity"));
+  connect(actionResetMatrix, SIGNAL(triggered()), this,SLOT(ResetTransformationToIdentity()));
+
   // TRIAL DS
   /*
   QMenu * m = new QMenu(menubar);
@@ -290,8 +295,8 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
   connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString)));
   connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double)));
   connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int)),this,SLOT(SetOverlayProperty(int)));
-  connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,double,double)),
-          this,SLOT(SetFusionProperty(int,int,double,double)));
+  connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,int,double,double)),
+          this,SLOT(SetFusionProperty(int,int,int,double,double)));
   connect(landmarksPanel,SIGNAL(UpdateRenderWindows()),this,SLOT(UpdateRenderWindows()));
 
   playMode = 0;//pause
@@ -910,8 +915,6 @@ void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::Loa
                 this, SLOT(OverlayChanged(int,double,double)));
         connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)),
                 this, SLOT(FusionChanged(int,double)));
-        connect(mSlicerManagers.back(), SIGNAL(UpdateWindows(int, int, int)),
-                this,SLOT(WindowsChanged(int, int, int)));
         connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)),
                 this,SLOT(WindowLevelChanged(double, double, int, int)));
         connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)),
@@ -1165,15 +1168,17 @@ void vvMainWindow::ImageInfoChanged()
       overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str());
       overlayPanel->getOverlayProperty(-1);
     }
+    
     if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) {
       overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
       overlayPanel->getFusionProperty(mSlicerManagers[index]->GetFusionOpacity(),
+                                      mSlicerManagers[index]->GetFusionThresholdOpacity(),
                                       mSlicerManagers[index]->GetFusionColorMap(),
                                       mSlicerManagers[index]->GetFusionWindow(),
                                       mSlicerManagers[index]->GetFusionLevel());
     } else {
       overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
-      overlayPanel->getFusionProperty(-1, -1,-1,-1);
+      overlayPanel->getFusionProperty(-1, -1, -1, -1, -1);
     }
   }
 }
@@ -1381,13 +1386,9 @@ void vvMainWindow::DisplayChanged(QTreeWidgetItem *clickedItem, int column)
       mSlicerManagers[slicerManagerIndex]->UpdateSlicer(column-1, true);
       mSlicerManagers[slicerManagerIndex]->UpdateInfoOnCursorPosition(column-1);
       DisplaySliders(slicerManagerIndex, column-1);
-      if(!draw) {
-        // We were not on this branch so far => force visibility
-        vis = true;
-      }
-      else if(clickedParentItem == clickedItem) {
+      if(clickedParentItem == clickedItem) {
         // Toggle
-        vis =  !vis;
+        vis = !draw || !vis;
       }
       clickedSlicer->SetActorVisibility("image", 0, vis);
       clickedParentItem->setData(column, Qt::CheckStateRole, vis?2:0);
@@ -1627,13 +1628,6 @@ void vvMainWindow::FusionChanged(int visibility, double value)
 }
 //------------------------------------------------------------------------------
 
-//------------------------------------------------------------------------------
-void vvMainWindow::WindowsChanged(int window, int view, int slice)
-{
-  infoPanel->setViews(window, view, slice);
-}
-//------------------------------------------------------------------------------
-
 //------------------------------------------------------------------------------
 void vvMainWindow::WindowLevelChanged(double window, double level,int preset,int colormap)
 {
@@ -1914,6 +1908,16 @@ void vvMainWindow::SelectFusionImage()
 }
 //------------------------------------------------------------------------------
 
+//------------------------------------------------------------------------------
+void vvMainWindow::ResetTransformationToIdentity()
+{
+  std::string actorType = DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString().toStdString();
+  int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+  mSlicerManagers[index]->ResetTransformationToIdentity(actorType);
+  ImageInfoChanged();
+}
+//------------------------------------------------------------------------------
+
 //------------------------------------------------------------------------------
 void vvMainWindow::AddFusionImage(int index, QString file)
 {
@@ -2003,6 +2007,7 @@ void vvMainWindow::OpenField()
     }
 
   QString Extensions = "Images ( *.mhd)";
+  Extensions += ";;Images ( *.mha)";
   Extensions += ";;Images ( *.vf)";
   QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions);
   if (!file.isEmpty())
@@ -2144,12 +2149,13 @@ void vvMainWindow::SetOverlayProperty(int color)
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
-void vvMainWindow::SetFusionProperty(int opacity, int colormap,double window, double level)
+void vvMainWindow::SetFusionProperty(int opacity, int thresOpacity, int colormap,double window, double level)
 {
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) {
-    mSlicerManagers[index]->SetFusionOpacity(opacity);
     mSlicerManagers[index]->SetFusionColorMap(colormap);
+    mSlicerManagers[index]->SetFusionOpacity(opacity);
+    mSlicerManagers[index]->SetFusionThresholdOpacity(thresOpacity);
     mSlicerManagers[index]->SetFusionWindow(window);
     mSlicerManagers[index]->SetFusionLevel(level);
     mSlicerManagers[index]->SetColorMap(0);
@@ -2179,14 +2185,17 @@ void vvMainWindow::SaveAs()
     OutputListeFormat.push_back(".jpeg");
     OutputListeFormat.push_back(".tif");
     OutputListeFormat.push_back(".mhd");
+    OutputListeFormat.push_back(".mha");
     OutputListeFormat.push_back(".hdr");
     OutputListeFormat.push_back(".vox");
   } else if (dimension == 3) {
     OutputListeFormat.push_back(".mhd");
+    OutputListeFormat.push_back(".mha");
     OutputListeFormat.push_back(".hdr");
     OutputListeFormat.push_back(".vox");
   } else if (dimension == 4) {
     OutputListeFormat.push_back(".mhd");
+    OutputListeFormat.push_back(".mha");
   }
   QString Extensions = "AllFiles(*.*)";
   for (int i = 0; i < OutputListeFormat.count(); i++) {
@@ -2488,27 +2497,22 @@ void vvMainWindow::UpdateTSlice(int slicer, int slice)
 void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax)
 {
   int position = int((min+max)/2);
-  int tPosition = int((tmin+tmax)/2);
   if (slicer == 0) {
     NOVerticalSlider->setValue(position);
     NOVerticalSlider->setRange(min,max);
     NOHorizontalSlider->setRange(tmin,tmax);
-    NOHorizontalSlider->setValue(tPosition);
   } else if (slicer == 1) {
     NEVerticalSlider->setValue(position);
     NEVerticalSlider->setRange(min,max);
     NEHorizontalSlider->setRange(tmin,tmax);
-    NEHorizontalSlider->setValue(tPosition);
   } else if (slicer == 2) {
     SOVerticalSlider->setValue(position);
     SOVerticalSlider->setRange(min,max);
     SOHorizontalSlider->setRange(tmin,tmax);
-    SOHorizontalSlider->setValue(tPosition);
   } else if (slicer == 3) {
     SEVerticalSlider->setValue(position);
     SEVerticalSlider->setRange(min,max);
     SEHorizontalSlider->setRange(tmin,tmax);
-    SEHorizontalSlider->setValue(tPosition);
   }
 }
 //------------------------------------------------------------------------------
@@ -2832,8 +2836,6 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen
           this, SLOT(OverlayChanged(int,double,double)));
   connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)),
           this, SLOT(FusionChanged(int,double)));
-  connect(mSlicerManagers.back(), SIGNAL(UpdateWindows(int, int, int)),
-          this,SLOT(WindowsChanged(int, int, int)));
   connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)),
           this,SLOT(WindowLevelChanged(double, double, int, int)));
   connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)),