Added svl file format (Clarity)

[clitk.git] / vv / vvMainWindow.cxx

diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx
index f6f77e231b507cb311cb4b9560c113ef7955ed7e..5cf7c9810cbeb46e7cc83f67773edc59be3f205a 100644 (file)
--- a/vv/vvMainWindow.cxx
+++ b/vv/vvMainWindow.cxx
@@ -101,9 +101,9 @@
 #define COLUMN_IMAGE_NAME 7
 
 #if CLITK_PRIVATE_FEATURES
-  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.usf)"
+  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan *.usf *.svl)"
 #else
-  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr)"
+  #define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.mha *.hdr *.vox *.his *.xdr *.SCAN *.nii *.nrrd *.nhdr *.refscan)"
 #endif
 
 /*Data Tree values
@@ -1100,21 +1100,28 @@ void vvMainWindow::ImageInfoChanged()
     //read image header
     int NPixel = 1;
 
+    int tSlice = 0;
     vvImage::Pointer imageSelected;
     if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0]) {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice();
     } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice();
     } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay") {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetOverlayTSlice();
     } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion") {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetFusionTSlice();
     }
     else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "contour") {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice();
     }
     else {
       imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage();
+      tSlice = mSlicerManagers[index]->GetSlicer(0)->GetTSlice();
     }
 
     dimension = imageSelected->GetNumberOfDimensions();
@@ -1142,7 +1149,7 @@ void vvMainWindow::ImageInfoChanged()
     infoPanel->setOrigin(GetVectorDoubleAsString(origin));
     infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing));
     infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")");
-    transformation = imageSelected->GetTransform()[mSlicerManagers[index]->GetTSlice()]->GetMatrix();
+    transformation = imageSelected->GetTransform()[tSlice]->GetMatrix();
     infoPanel->setTransformation(Get4x4MatrixDoubleAsString(transformation));
 
     landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(),
@@ -3063,6 +3070,12 @@ void vvMainWindow::ShowLastImage()
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateRenderWindows()
 {
+  for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+    mSlicerManagers[i]->GetSlicer(0)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(1)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(2)->UpdateLandmarks();
+    mSlicerManagers[i]->GetSlicer(3)->UpdateLandmarks();
+  }
   if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render();
   if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render();
   if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render();