]> Creatis software - clitk.git/blobdiff - vv/vvMainWindow.cxx
Debug RTStruct conversion with empty struc
[clitk.git] / vv / vvMainWindow.cxx
index 9d29824c3abc473bdf860008032c581dd97643df..d148c3f14cc8ecf9ed748483372cbe5751ebaa6c 100644 (file)
@@ -18,12 +18,14 @@ It is distributed under dual licence
 
 #include <algorithm>
 #include <QMessageBox>
+#include <QMimeData>
 #include <QInputDialog>
 #include <QTimer>
 #include "QTreePushButton.h"
 #include <QUrl>
 #include <QSettings>
 #include <QShortcut>
+#include <QFileSystemWatcher>
 
 // VV include
 #include "vvMainWindow.h"
@@ -48,6 +50,9 @@ It is distributed under dual licence
 #include "vvMeshReader.h"
 #include "vvSaveState.h"
 #include "vvReadState.h"
+#if CLITK_USE_PACS_CONNECTION
+#include "vvQPacsConnection.h"
+#endif
 #include "clitkConfiguration.h"
 #include "clitkMatrix.h"
 #ifdef Q_OS_OSX
@@ -79,9 +84,7 @@ It is distributed under dual licence
 #include <vtkPNGWriter.h>
 #include <vtkJPEGWriter.h>
 #include <vtkGenericMovieWriter.h>
-#ifdef CLITK_EXPERIMENTAL
-#  include <vvAnimatedGIFWriter.h>
-#endif
+#include <vvAnimatedGIFWriter.h>
 #ifdef VTK_USE_VIDEO_FOR_WINDOWS
 #  include <vtkAVIWriter.h>
 #endif
@@ -131,6 +134,10 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
 { 
   setupUi(this); // this sets up the GUI
 
+  setAcceptDrops(true); // enable to drop into the window
+
+  setDicomClient();
+
   //Qt::WindowFlags flags = windowFlags();
   //setWindowFlags(flags | Qt::WindowStaysOnTopHint);
 
@@ -230,6 +237,9 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
   documentation = new vvDocumentation();
   help_dialog = new vvHelpDialog();
   dicomSeriesSelector = new vvDicomSeriesSelector();
+#if CLITK_USE_PACS_CONNECTION
+     PacsConnection = new vvQPacsConnection();
+#endif
 
   inverseButton->setEnabled(0);
   actionAdd_overlay_image_to_current_image->setEnabled(0);
@@ -272,6 +282,9 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
   connect(actionWarp_image_with_vector_field,SIGNAL(triggered()),this,SLOT(WarpImage()));
   connect(actionLoad_images,SIGNAL(triggered()),this,SLOT(OpenImages()));
   connect(actionOpen_Dicom,SIGNAL(triggered()),this,SLOT(OpenDicom()));
+#if CLITK_USE_PACS_CONNECTION
+  connect(actionConnect_Pacs,SIGNAL(triggered()),this,SLOT(ConnectPacs()));
+#endif
   //  connect(actionOpen_Dicom_Struct,SIGNAL(triggered()),this,SLOT(OpenDCStructContour()));
   connect(actionOpen_VTK_contour,SIGNAL(triggered()),this,SLOT(OpenVTKContour()));
   connect(actionOpen_Multiple_Images_As_One,SIGNAL(triggered()),this,SLOT(MergeImages()));
@@ -374,13 +387,24 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
     updateRecentlyOpenedFilesMenu(recent_files);
   }
 
+  //Update and get vv parameters
+  setVVSettings();
+
   // Adding all new tools (insertion in the menu)
   vvToolManager::GetInstance()->InsertToolsInMenu(this);
   vvToolManager::GetInstance()->EnableToolsInMenu(this, false);
 
+//#ifndef CLITK_EXPERIMENTAL
+//#define CLITK_EXPERIMENTAL 0
+//#endif
+#ifdef CLITK_EXPERIMENTAL
   if (!CLITK_EXPERIMENTAL)
     menuExperimental->menuAction()->setVisible(false);
+#endif
 
+#if !CLITK_USE_PACS_CONNECTION
+    actionConnect_Pacs->setVisible(false);
+#endif
 
   QTimer * timerMemory = new QTimer(this);
   //timerMemory->setInterval(5);
@@ -399,7 +423,7 @@ void vvMainWindow::UpdateMemoryUsage()
 { 
   //  clitk::PrintMemory(true);
   if (clitk::GetMemoryUsageInMb() == 0) infoPanel->setMemoryInMb("NA");
-  else infoPanel->setMemoryInMb(QString::number(clitk::GetMemoryUsageInMb())+" MiB");
+  else infoPanel->setMemoryInMb(QString::number(clitk::GetMemoryUsageInMb())+" MB");
 }
 //------------------------------------------------------------------------------
 
@@ -754,7 +778,24 @@ void vvMainWindow::OpenDicom()
     files = *(dicomSeriesSelector->GetFilenames());
     LoadImages(files, vvImageReader::DICOM);
   }
-}
+}  
+#if CLITK_USE_PACS_CONNECTION
+void vvMainWindow::ConnectPacs()
+{
+  std::vector<std::string> files;
+
+  //std::cout << "dicomSeriesSelector " << std::endl;
+if (PacsConnection->exec() == QDialog::Accepted) {
+       for (int i = 0; i < PacsConnection->getSeriesCount(); i++)
+       {
+               files = PacsConnection->getFileNames(i);
+               LoadImages(files, vvImageReader::DICOM);
+       }
+       PacsConnection->clearMove();
+  }
+  }
+
+#endif
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
@@ -782,6 +823,25 @@ void vvMainWindow::OpenRecentImage()
   LoadImages(images, vvImageReader::IMAGE);
 }
 //------------------------------------------------------------------------------
+void vvMainWindow::dragEnterEvent(QDragEnterEvent *event)
+{
+  if (event->mimeData()->hasUrls()) {
+    event->acceptProposedAction();
+  }
+}
+//------------------------------------------------------------------------------
+void vvMainWindow::dropEvent(QDropEvent *event)
+{
+  const QMimeData * mimeData = event->mimeData();
+  if (!mimeData->hasUrls())
+    return;
+  std::vector<std::string> images;
+  for (int i=0; i<mimeData->urls().size(); ++i) {
+    images.push_back(mimeData->urls()[i].toLocalFile().toStdString());
+  }
+  LoadImages(images, vvImageReader::IMAGE);
+}
+//------------------------------------------------------------------------------
 
 
 //------------------------------------------------------------------------------
@@ -868,11 +928,13 @@ void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::Loa
       // Change filename if an image with the same already exist
       int number = GetImageDuplicateFilenameNumber(files[i] + std::string("_slice"));
 
-      if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME || filetype == vvImageReader::SLICED) {
+      if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME || filetype == vvImageReader::SLICED)
         SetImageSucceed = imageManager->SetImage(files[i],filetype, number, j);
-      } else {
+      else if (filetype == vvImageReader::DICOM)
+        SetImageSucceed = imageManager->SetImages(files,filetype, number, dicomSeriesSelector->IsPatientCoordianteSystemChecked());
+      else
         SetImageSucceed = imageManager->SetImages(files,filetype, number);
-      }
+
       if (!SetImageSucceed) {
         QApplication::restoreOverrideCursor();
         QString error = "Cannot open file \n";
@@ -921,6 +983,12 @@ void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::Loa
 
         linkPanel->addImage(imageManager->GetFileName(), id.toStdString());
 
+        //Create a watcher to see if the image file is modified. In such a case, reload it automatically
+        QFileSystemWatcher* watcher = new QFileSystemWatcher;
+        watcher->addPath(files[i].c_str());
+        connect(watcher, SIGNAL(fileChanged(const QString&)), this, SLOT(SlotFileChanged(const QString&)));
+
+
         connect(mSlicerManagers.back(), SIGNAL(currentImageChanged(std::string)),
           this,SLOT(CurrentImageChanged(std::string)));
         connect(mSlicerManagers.back(), SIGNAL(currentPickedImageChanged(std::string)),
@@ -950,6 +1018,7 @@ void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::Loa
         connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)),
           this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)));
         connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
+        connect(landmarksPanel,SIGNAL(UpdateLandmarkTransform()), mSlicerManagers.back(), SLOT(UpdateLandmark()));
         InitSlicers();
         numberofsuccesulreads++;
       }
@@ -1138,7 +1207,7 @@ void vvMainWindow::ImageInfoChanged()
       sizeMM[i] = inputSize[i]*inputSpacing[i];
       NPixel *= inputSize[i];
     }
-    inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
+    inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize());
 
     QString dim = QString::number(dimension) + " (";
     dim += pixelType + ")";
@@ -1339,15 +1408,15 @@ QString vvMainWindow::GetSizeInBytes(unsigned long size)
   if (size > 1000000000) {
     size /= 1000000000;
     result += QString::number(size);
-    result += "Gb";//)";
+    result += "GB";//)";
   } else if (size > 1000000) {
     size /= 1000000;
     result += QString::number(size);
-    result += "Mb";//)";
+    result += "MB";//)";
   } else if (size > 1000) {
     size /= 1000;
     result += QString::number(size);
-    result += "kb";//)";
+    result += "kB";//)";
   }
   return result;
 }
@@ -1379,6 +1448,29 @@ QString vvMainWindow::GetVectorIntAsString(std::vector<int> vectorInt)
 }
 //------------------------------------------------------------------------------
 
+//------------------------------------------------------------------------------
+void vvMainWindow::SlotFileChanged(const QString& pathname)
+{
+  std::vector<QTreeWidgetItem*> items = GetItemFromPathname(pathname);
+  for (unsigned int i=0; i< items.size(); ++i)
+    ReloadImage(items[i], 0);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+std::vector<QTreeWidgetItem*> vvMainWindow::GetItemFromPathname(const QString& pathname)
+{
+  std::vector<QTreeWidgetItem*> items;
+  for (int i = 0; i < DataTree->topLevelItemCount(); ++i) {
+    QString tempItemPathname(DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString());
+    tempItemPathname = tempItemPathname.left(tempItemPathname.length() - 1);
+    if (tempItemPathname == pathname)
+      items.push_back(DataTree->topLevelItem(i));
+  }
+  return items;
+}
+//------------------------------------------------------------------------------
+
 //------------------------------------------------------------------------------
 //this actually returns the SlicerManager index!
 int vvMainWindow::GetSlicerIndexFromItem(QTreeWidgetItem* item)
@@ -3241,7 +3333,11 @@ void vvMainWindow::SaveSEScreenshot()
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveScreenshotAllSlices()
 { 
+#if (VTK_MAJOR_VERSION == 8 && VTK_MINOR_VERSION >= 2) || VTK_MAJOR_VERSION >= 9
+  QVTKOpenGLNativeWidget *widget = NOViewWidget;
+#else
   QVTKWidget *widget = NOViewWidget;
+#endif
 
   int index = 0;// GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   vvSlicerManager * SM = mSlicerManagers[index];
@@ -3267,7 +3363,11 @@ void vvMainWindow::SaveScreenshotAllSlices()
     // Screenshot
     vtkSmartPointer<vtkWindowToImageFilter> windowToImageFilter = vtkSmartPointer<vtkWindowToImageFilter>::New();
     windowToImageFilter->SetInput(renderWindow);
+#if (VTK_MAJOR_VERSION >= 8 && VTK_MINOR_VERSION >= 2) || VTK_MAJOR_VERSION >= 9
+    windowToImageFilter->SetScale(1);
+#else
     windowToImageFilter->SetMagnification(1);
+#endif
     windowToImageFilter->SetInputBufferTypeToRGBA(); //also record the alpha (transparency) channel
     windowToImageFilter->Update();
 
@@ -3293,22 +3393,24 @@ void vvMainWindow::SaveScreenshotAllSlices()
 
 
 //------------------------------------------------------------------------------
+#if (VTK_MAJOR_VERSION == 8 && VTK_MINOR_VERSION >= 2) || VTK_MAJOR_VERSION >= 9
+void vvMainWindow::SaveScreenshot(QVTKOpenGLNativeWidget *widget)
+#else
 void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
+#endif
 { 
-  QString Extensions = "Images( *.png);;";
-  Extensions += "Images( *.jpg);;";
-  Extensions += "Images( *.bmp);;";
-  Extensions += "Images( *.tif);;";
-  Extensions += "Images( *.ppm)";
+  QString Extensions = "*.png;;";
+  Extensions += "*.jpg;;";
+  Extensions += "*.bmp;;";
+  Extensions += "*.tif;;";
+  Extensions += "*.ppm";
 #if defined(VTK_USE_FFMPEG_ENCODER) || defined(VTK_USE_VIDEO_FOR_WINDOWS)
-  Extensions += ";;Video( *.avi)";
+  Extensions += ";;*.avi Video";
 #endif
 #ifdef VTK_USE_MPEG2_ENCODER
-  Extensions += ";;Video( *.mpg)";
-#endif
-#ifdef CLITK_EXPERIMENTAL
-  Extensions += ";;Video( *.gif)";
+  Extensions += ";;*.mpg Video";
 #endif
+  Extensions += ";;*.gif Video";
 
   int smIndex=GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   QString fileName = QFileDialog::getSaveFileName(this,
@@ -3319,6 +3421,12 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
   if (!fileName.isEmpty()) {
     vtkSmartPointer<vtkWindowToImageFilter> w2i = vtkSmartPointer<vtkWindowToImageFilter>::New();
     w2i->SetInput(widget->GetRenderWindow());
+#if (VTK_MAJOR_VERSION >= 8 && VTK_MINOR_VERSION >= 2) || VTK_MAJOR_VERSION >= 9
+    w2i->SetScale(1);
+#else
+    w2i->SetMagnification(1);
+#endif
+    //w2i->SetInputBufferTypeToRGBA(); //also record the alpha (transparency) channel
     w2i->Update();
     vtkImageData *image = w2i->GetOutput();
 
@@ -3351,7 +3459,6 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
 
     // Video
     vtkGenericMovieWriter *vidwriter = NULL;
-#if CLITK_EXPERIMENTAL == 1
     if (ext==".gif") {
       vvAnimatedGIFWriter *gif = vvAnimatedGIFWriter::New();
       vidwriter = gif;
@@ -3376,14 +3483,13 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
       msgBox.addButton(tr("No"), QMessageBox::RejectRole);
       gif->SetDither(msgBox.exec() == QMessageBox::AcceptRole);
     }
-#endif
 #ifdef VTK_USE_VIDEO_FOR_WINDOWS
     if (ext==".avi") {
       vtkAVIWriter *mpg = vtkAVIWriter::New();
       vidwriter = mpg;
       mpg->SetQuality(2);
       bool ok;
-      int fps = QInputDialog::getInteger(this, tr("Number of frames per second"),
+      int fps = QInputDialog::getInt(this, tr("Number of frames per second"),
         tr("FPS:"), 5, 0, 1024, 1, &ok);
       if(!ok)
         fps = 5;
@@ -3396,7 +3502,7 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
       vidwriter = mpg;
       mpg->SetQuality(2);
       bool ok;
-      int fps = QInputDialog::getInteger(this, tr("Number of frames per second"),
+      int fps = QInputDialog::getInt(this, tr("Number of frames per second"),
         tr("FPS:"), 5, 0, 1024, 1, &ok);
       if(!ok)
         fps = 5;
@@ -3665,6 +3771,7 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen
   connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)),
     this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)));
   connect(mSlicerManagers.back(), SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
+  connect(landmarksPanel,SIGNAL(UpdateLandmarkTransform()), mSlicerManagers.back(), SLOT(UpdateLandmark()));