/*=========================================================================
+ Program: vv http://www.creatis.insa-lyon.fr/rio/vv
-Program: vv
-Language: C++
-Author : Pierre Seroul (pierre.seroul@gmail.com)
+ Authors belong to:
+ - University of LYON http://www.universite-lyon.fr/
+ - Léon Bérard cancer center http://www.centreleonberard.fr
+ - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
-Copyright (C) 200COLUMN_IMAGE_NAME
-Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
-CREATIS-LRMN http://www.creatis.insa-lyon.fr
+ This software is distributed WITHOUT ANY WARRANTY; without even
+ the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the copyright notices for more information.
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation, version 3 of the License.
+ It is distributed under dual licence
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-GNU General Public License for more details.
+ - BSD See included LICENSE.txt file
+ - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+===========================================================================**/
-You should have received a copy of the GNU General Public License
-along with this program. If not, see <http://www.gnu.org/licenses/>.
-
-=========================================================================*/
#include <algorithm>
#include <QMessageBox>
#include <QInputDialog>
#include <QTimer>
+#include "QTreePushButton.h"
+// VV include
#include "vvMainWindow.h"
#include "vvHelpDialog.h"
#include "vvDocumentation.h"
#include "vvProgressDialog.h"
#include "vvQDicomSeriesSelector.h"
#include "vvSlicerManager.h"
-#include "clitkIOCommon.h"
+#include "clitkImageCommon.h"
#include "vvSlicer.h"
#include "vvInteractorStyleNavigator.h"
#include "vvImageWriter.h"
-#include "vvResamplerDialog.h"
#include "vvSegmentationDialog.h"
#include "vvSurfaceViewerDialog.h"
#include "vvDeformationDialog.h"
#include "vvImageWarp.h"
#include "vvUtils.h"
-#include "vvMaximumIntensityProjection.h"
#include "vvMidPosition.h"
#include "vvMesh.h"
#include "vvStructSelector.h"
#include "vvMeshReader.h"
-#include "vvCropDialog.h"
-#include "QTreePushButton.h"
-
-#ifdef CLITK_VV_USE_BDCM
-#include <bdcmDicomFilesSelectorDialog.h>
+#include "clitkConfiguration.h"
+
+// ITK include
+#include <itkImage.h>
+#include <itkImageFileReader.h>
+#include <itkByteSwapper.h>
+#include <itkCommand.h>
+#include <itkNumericSeriesFileNames.h>
+
+// VTK include
+#include <vtkImageData.h>
+#include <vtkImageActor.h>
+#include <vtkCornerAnnotation.h>
+#include <vtkRenderWindow.h>
+#include <vtkRenderWindowInteractor.h>
+#include <vtkRenderer.h>
+#include <vtkRendererCollection.h>
+#include <vtkWindowToImageFilter.h>
+#include <vtkBMPWriter.h>
+#include <vtkTIFFWriter.h>
+#include <vtkPNMWriter.h>
+#include <vtkPNGWriter.h>
+#include <vtkJPEGWriter.h>
+#include <vtkFFMPEGWriter.h>
+#ifdef VTK_USE_MPEG2_ENCODER
+ #include <vtkMPEG2Writer.h>
#endif
-
-#include "itkImage.h"
-#include "itkImageFileReader.h"
-#include "itkByteSwapper.h"
-#include "itkCommand.h"
-#include "itkNumericSeriesFileNames.h"
-
-#include "vtkImageData.h"
-#include "vtkImageActor.h"
-#include "vtkCornerAnnotation.h"
-#include "vtkRenderWindow.h"
-#include "vtkRenderWindowInteractor.h"
-#include "vtkRenderer.h"
-#include "vtkRendererCollection.h"
-
-#include "vtkWindowToImageFilter.h"
-#include "vtkBMPWriter.h"
-#include "vtkTIFFWriter.h"
-#include "vtkPNMWriter.h"
-#include "vtkPNGWriter.h"
-#include "vtkJPEGWriter.h"
+#include <vtkMatrix4x4.h>
+#include <vtkTransform.h>
// Standard includes
#include <iostream>
-
-#include "vvConstants.h"
+#include <sstream>
+#include <iomanip>
#define COLUMN_TREE 0
#define COLUMN_UL_VIEW 1
#define COLUMN_RELOAD_IMAGE 6
#define COLUMN_IMAGE_NAME 7
+#define EXTENSIONS "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox *.his *.xdr *.SCAN )"
+
/*Data Tree values
0,Qt::UserRole full filename
1,Qt::CheckStateRole checkbutton UL View
5,0 short filename
5,Qt::UserRole mSlicerManager id*/
-//====================================================================
-vvMainWindow::vvMainWindow() {
- setupUi(this); // this sets up the GUI
-
- mInputPathName = "";
-
- //Init the contextMenu
- this->setContextMenuPolicy(Qt::CustomContextMenu);
- contextActions.resize(0);
- QAction* actionOpen_new_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/fileopen.png")),
- tr("Open new Image"));
- connect(actionOpen_new_image,SIGNAL(triggered()),this,SLOT(OpenImages()));
- contextActions.push_back(actionOpen_new_image);
-
- contextMenu.addSeparator();
-
- QAction* actionClose_Image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")),
- tr("Close Current Image"));
- connect(actionClose_Image,SIGNAL(triggered()),this,SLOT(CloseImage()));
- contextActions.push_back(actionClose_Image);
-
- QAction* actionReload_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")),
- tr("Reload Current Image"));
- connect(actionReload_image,SIGNAL(triggered()),this,SLOT(ReloadImage()));
- contextActions.push_back(actionReload_image);
-
- QAction* actionSave_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/filesave.png")),
- tr("Save Current Image"));
- connect(actionSave_image,SIGNAL(triggered()),this,SLOT(SaveAs()));
- contextActions.push_back(actionSave_image);
-
- contextMenu.addSeparator();
-
- QAction* actionCrop_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/crop.png")),
- tr("Crop Current Image"));
- connect(actionCrop_image,SIGNAL(triggered()),this,SLOT(CropImage()));
- contextActions.push_back(actionCrop_image);
-
- QAction* actionSplit_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/cut.png")),
- tr("Split Current Image"));
- connect(actionSplit_image,SIGNAL(triggered()),this,SLOT(SplitImage()));
- contextActions.push_back(actionSplit_image);
-
- contextMenu.addSeparator();
-
- contextMenu.addAction(actionAdd_VF_to_current_Image);
- contextActions.push_back(actionAdd_VF_to_current_Image);
-
- QAction* actionAdd_Overlay_to_current_Image = menuOverlay->addAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/GPSup.png")),
- tr("Add overlay image to current image"));
- contextMenu.addAction(actionAdd_Overlay_to_current_Image);
- contextActions.push_back(actionAdd_Overlay_to_current_Image);
-
- connect(actionAdd_Overlay_to_current_Image,SIGNAL(triggered()), this,SLOT(SelectOverlayImage()));
-
- contextMenu.addAction(actionAdd_fusion_image);
- connect(actionAdd_fusion_image,SIGNAL(triggered()),this,SLOT(AddFusionImage()));
- contextActions.push_back(actionAdd_fusion_image);
-
-
- //init the DataTree
- mSlicerManagers.resize(0);
-
- QStringList header;
- header.append("");
- header.append("TL");
- header.append("TR");
- header.append("BL");
- header.append("BR");
- header.append("");
- header.append("");
- header.append("Name");
-
- DataTree->setHeaderLabels(header);
- DataTree->resizeColumnToContents(COLUMN_TREE);
- DataTree->resizeColumnToContents(COLUMN_UL_VIEW);
- DataTree->resizeColumnToContents(COLUMN_UR_VIEW);
- DataTree->resizeColumnToContents(COLUMN_DL_VIEW);
- DataTree->resizeColumnToContents(COLUMN_DR_VIEW);
- DataTree->resizeColumnToContents(COLUMN_CLOSE_IMAGE);
- DataTree->resizeColumnToContents(COLUMN_RELOAD_IMAGE);
- DataTree->resizeColumnToContents(COLUMN_IMAGE_NAME);
-
- viewMode = 1;
- documentation = new vvDocumentation();
- help_dialog = new vvHelpDialog();
- dicomSeriesSelector = new vvDicomSeriesSelector();
-
- inverseButton->setEnabled(0);
- actionAdd_Overlay_to_current_Image->setEnabled(0);
- actionSave_As->setEnabled(0);
- actionAdd_VF_to_current_Image->setEnabled(0);
- actionAdd_fusion_image->setEnabled(0);
-
- //init the sliders
- verticalSliders.push_back(NOVerticalSlider);
- verticalSliders.push_back(NEVerticalSlider);
- verticalSliders.push_back(SOVerticalSlider);
- verticalSliders.push_back(SEVerticalSlider);
-
- for (int i =0; i < 4; i++)
- verticalSliders[i]->hide();
-
- horizontalSliders.push_back(NOHorizontalSlider);
- horizontalSliders.push_back(NEHorizontalSlider);
- horizontalSliders.push_back(SOHorizontalSlider);
- horizontalSliders.push_back(SEHorizontalSlider);
-
- for (int i =0; i < 4; i++)
- horizontalSliders[i]->hide();
-
-
- connect(NOVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(NOVerticalSliderChanged()));
- connect(NEVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(NEVerticalSliderChanged()));
- connect(SOVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(SOVerticalSliderChanged()));
- connect(SEVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(SEVerticalSliderChanged()));
-
- connect(NOHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(NOHorizontalSliderMoved()));
- connect(NEHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(NEHorizontalSliderMoved()));
- connect(SOHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(SOHorizontalSliderMoved()));
- connect(SEHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(SEHorizontalSliderMoved()));
-
- //connect everything
- connect(actionMaximum_Intensity_Projection,SIGNAL(triggered()),this,SLOT(ComputeMIP()));
- connect(actionCompute_mid_position_image,SIGNAL(triggered()),this,SLOT(ComputeMidPosition()));
- connect(actionDeformable_Registration,SIGNAL(triggered()),this,SLOT(ComputeDeformableRegistration()));
- connect(actionWarp_image_with_vector_field,SIGNAL(triggered()),this,SLOT(WarpImage()));
- connect(actionLoad_images,SIGNAL(triggered()),this,SLOT(OpenImages()));
- connect(actionOpen_Dicom,SIGNAL(triggered()),this,SLOT(OpenDicom()));
- connect(actionOpen_Dicom_Struct,SIGNAL(triggered()),this,SLOT(OpenDCStructContour()));
- connect(actionOpen_VTK_contour,SIGNAL(triggered()),this,SLOT(OpenVTKContour()));
- connect(actionOpen_Multiple_Images_As_One,SIGNAL(triggered()),this,SLOT(MergeImages()));
- connect(actionOpen_Image_With_Time,SIGNAL(triggered()),this,SLOT(OpenImageWithTime()));
- connect(actionMerge_images_as_n_dim_t, SIGNAL(triggered()), this, SLOT(MergeImagesWithTime()));
- connect(actionSave_As,SIGNAL(triggered()),this,SLOT(SaveAs()));
- connect(actionExit,SIGNAL(triggered()),this,SLOT(close()));
- connect(actionAdd_VF_to_current_Image,SIGNAL(triggered()),this,SLOT(OpenField()));
- connect(actionNavigation_Help,SIGNAL(triggered()),this,SLOT(ShowHelpDialog()));
- connect(actionDocumentation,SIGNAL(triggered()),this,SLOT(ShowDocumentation()));
-
- ///////////////////////////////////////////////
- contextMenu.addAction(actionResampler);
- connect(actionResampler,SIGNAL(triggered()),this,SLOT(ResampleCurrentImage()));
- connect(actionSegmentation,SIGNAL(triggered()),this,SLOT(SegmentationOnCurrentImage()));
- connect(actionSurface_Viewer,SIGNAL(triggered()),this,SLOT(SurfaceViewerLaunch()));
- ///////////////////////////////////////////////
-
- actionNorth_East_Window->setEnabled(0);
- actionNorth_West_Window->setEnabled(0);
- actionSouth_East_Window->setEnabled(0);
- actionSouth_West_Window->setEnabled(0);
-
- connect(actionNorth_East_Window,SIGNAL(triggered()),this,SLOT(SaveNEScreenshot()));
- connect(actionNorth_West_Window,SIGNAL(triggered()),this,SLOT(SaveNOScreenshot()));
- connect(actionSouth_East_Window,SIGNAL(triggered()),this,SLOT(SaveSEScreenshot()));
- connect(actionSouth_West_Window,SIGNAL(triggered()),this,SLOT(SaveSOScreenshot()));
-
- connect(DataTree,SIGNAL(itemSelectionChanged()),this,SLOT(ImageInfoChanged()));
- connect(DataTree,SIGNAL(itemClicked(QTreeWidgetItem*, int)),this,
- SLOT(DisplayChanged(QTreeWidgetItem*, int)));
-
- connect(viewButton,SIGNAL(clicked()),this, SLOT(ChangeViewMode()) );
- connect(windowSpinBox,SIGNAL(editingFinished()),this,SLOT(WindowLevelEdited()));
- connect(levelSpinBox,SIGNAL(editingFinished()),this,SLOT(WindowLevelEdited()));
- connect(colorMapComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateColorMap()));
- connect(presetComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateWindowLevel()));
- connect(inverseButton,SIGNAL(clicked()),this,SLOT(SwitchWindowLevel()));
-
-
- connect(this,SIGNAL(customContextMenuRequested(QPoint)),this,SLOT(ShowContextMenu(QPoint)));
-
- connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString)));
- connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString)));
- connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int)),this,SLOT(SetVFProperty(int,int,int)));
- connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int)),this,SLOT(SetOverlayProperty(int)));
- connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,double,double)),
- this,SLOT(SetFusionProperty(int,int,double,double)));
- connect(landmarksPanel,SIGNAL(UpdateRenderWindows()),this,SLOT(UpdateRenderWindows()));
-
- playMode = 0;//pause
- mFrameRate = 10;
- playButton->setEnabled(0);
- frameRateLabel->setEnabled(0);
- frameRateSpinBox->setEnabled(0);
- connect(playButton, SIGNAL(clicked()),this,SLOT(PlayPause()));
- connect(frameRateSpinBox, SIGNAL(valueChanged(int)),this,SLOT(ChangeFrameRate(int)));
-
- goToCursorPushButton->setEnabled(0);
- connect(goToCursorPushButton, SIGNAL(clicked()),this,SLOT(GoToCursor()));
-
- NOViewWidget->hide();
- NEViewWidget->hide();
- SOViewWidget->hide();
- SEViewWidget->hide();
-
- //Recently opened files
- std::list<std::string> recent_files = GetRecentlyOpenedImages();
- if ( not recent_files.empty() )
- {
- QMenu * rmenu = new QMenu("Recently opened files...");
- rmenu->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/open.png")));
- menuFile->insertMenu(actionOpen_Image_With_Time,rmenu);
- for (std::list<std::string>::iterator i = recent_files.begin();i!=recent_files.end();i++)
- {
- QAction* current=new QAction(QIcon(QString::fromUtf8(":/new/prefix1/icons/open.png")),
- (*i).c_str(),this);
- rmenu->addAction(current);
- connect(current,SIGNAL(triggered()),this,SLOT(OpenRecentImage()));
- }
- }
-}
-//====================================================================
-void vvMainWindow::ComputeMIP()
+//------------------------------------------------------------------------------
+vvMainWindow::vvMainWindow():vvMainWindowBase()
{
- vvMaximumIntensityProjection mip;
- vvSlicerManager* selected_slicer = mSlicerManagers[GetSlicerIndexFromItem(DataTree->selectedItems()[0])];
- QFileInfo info(selected_slicer->GetFileName().c_str());
- mip.Compute(selected_slicer);
- AddImage(mip.GetOutput(),info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_mip.mhd");
+ setupUi(this); // this sets up the GUI
+
+ mInputPathName = "";
+ mMenuTools = menuTools;
+ // mMenuSegmentation = menuSegmentation;
+ mContextMenu = &contextMenu;
+ mMenuExperimentalTools = menuExperimental;
+ mMainWidget = this;
+ mCurrentTime = -1;
+ mCurrentSelectedImageId = "";
+ mCurrentPickedImageId = "";
+ mCurrentPickedImageIndex = 0;
+
+ //Init the contextMenu
+ this->setContextMenuPolicy(Qt::CustomContextMenu);
+ contextActions.resize(0);
+ QAction* actionOpen_new_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/fileopen.png")),
+ tr("O&pen new Image"));
+ actionOpen_new_image->setShortcut(QKeySequence(tr("Ctrl+O")));
+ connect(actionOpen_new_image,SIGNAL(triggered()),this,SLOT(OpenImages()));
+ contextActions.push_back(actionOpen_new_image);
+ contextMenu.addSeparator();
+
+ QAction* actionClose_Image = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/exit.png")),
+ tr("Close Current Image"));
+ connect(actionClose_Image,SIGNAL(triggered()),this,SLOT(CloseImage()));
+ contextActions.push_back(actionClose_Image);
+
+ QAction* actionReload_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")),
+ tr("Reload Current Image"));
+ connect(actionReload_image,SIGNAL(triggered()),this,SLOT(ReloadImage()));
+ contextActions.push_back(actionReload_image);
+
+ QAction* actionSave_image = contextMenu.addAction(QIcon(QString::fromUtf8(":/common/icons/filesave.png")),
+ tr("Save Current Image"));
+ connect(actionSave_image,SIGNAL(triggered()),this,SLOT(SaveAs()));
+ contextActions.push_back(actionSave_image);
+
+ contextMenu.addSeparator();
+
+ contextMenu.addAction(actionAdd_VF_to_current_Image);
+ contextActions.push_back(actionAdd_VF_to_current_Image);
+
+ QAction* actionAdd_Overlay_to_current_Image = menuOverlay->addAction(QIcon(QString::fromUtf8(":/common/icons/GPSup.png")),
+ tr("Add overlay image to current image"));
+ contextMenu.addAction(actionAdd_Overlay_to_current_Image);
+ contextActions.push_back(actionAdd_Overlay_to_current_Image);
+
+ connect(actionAdd_Overlay_to_current_Image,SIGNAL(triggered()), this,SLOT(SelectOverlayImage()));
+
+ contextMenu.addAction(actionAdd_fusion_image);
+ connect(actionAdd_fusion_image,SIGNAL(triggered()),this,SLOT(SelectFusionImage()));
+ contextActions.push_back(actionAdd_fusion_image);
+
+ // TRIAL DS
+ /*
+ QMenu * m = new QMenu(menubar);
+ m->setTitle("TOTO");
+ // m->setObjectName(QString::fromUtf8("TOTOTO"));
+ contextMenu.addMenu(m);
+ QAction * a = m->addAction(QIcon(QString::fromUtf8(":/common/icons/GPSup.png")),
+ tr("BIDON"));
+ QAction * b = m->addAction(QIcon(QString::fromUtf8(":/common/icons/GPSup.png")),
+ tr("BIDON2"));
+ m->addAction(a);
+ m->addAction(b);
+ connect(a,SIGNAL(triggered()),this,SLOT(AddFusionImage()));
+ */
+
+ //init the DataTree
+ mSlicerManagers.resize(0);
+
+ QStringList header;
+ header.append("");
+ header.append("TL");
+ header.append("TR");
+ header.append("BL");
+ header.append("BR");
+ header.append("");
+ header.append("");
+ header.append("Name");
+
+ DataTree->setHeaderLabels(header);
+ DataTree->resizeColumnToContents(COLUMN_TREE);
+ DataTree->resizeColumnToContents(COLUMN_UL_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_UR_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_DL_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_DR_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_CLOSE_IMAGE);
+ DataTree->resizeColumnToContents(COLUMN_RELOAD_IMAGE);
+ DataTree->resizeColumnToContents(COLUMN_IMAGE_NAME);
+
+ viewMode = 1;
+ documentation = new vvDocumentation();
+ help_dialog = new vvHelpDialog();
+ dicomSeriesSelector = new vvDicomSeriesSelector();
+
+ inverseButton->setEnabled(0);
+ actionAdd_Overlay_to_current_Image->setEnabled(0);
+ actionSave_As->setEnabled(0);
+ actionAdd_VF_to_current_Image->setEnabled(0);
+ actionAdd_fusion_image->setEnabled(0);
+
+ //init the sliders
+ verticalSliders.push_back(NOVerticalSlider);
+ verticalSliders.push_back(NEVerticalSlider);
+ verticalSliders.push_back(SOVerticalSlider);
+ verticalSliders.push_back(SEVerticalSlider);
+
+ for (int i =0; i < 4; i++)
+ verticalSliders[i]->hide();
+
+ horizontalSliders.push_back(NOHorizontalSlider);
+ horizontalSliders.push_back(NEHorizontalSlider);
+ horizontalSliders.push_back(SOHorizontalSlider);
+ horizontalSliders.push_back(SEHorizontalSlider);
+
+ for (int i =0; i < 4; i++)
+ horizontalSliders[i]->hide();
+
+
+ connect(NOVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(NOVerticalSliderChanged()));
+ connect(NEVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(NEVerticalSliderChanged()));
+ connect(SOVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(SOVerticalSliderChanged()));
+ connect(SEVerticalSlider,SIGNAL(valueChanged(int)),this,SLOT(SEVerticalSliderChanged()));
+
+ connect(NOHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(NOHorizontalSliderMoved()));
+ connect(NEHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(NEHorizontalSliderMoved()));
+ connect(SOHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(SOHorizontalSliderMoved()));
+ connect(SEHorizontalSlider,SIGNAL(valueChanged(int)),this,SLOT(SEHorizontalSliderMoved()));
+
+ //connect everything
+ connect(actionCompute_mid_position_image,SIGNAL(triggered()),this,SLOT(ComputeMidPosition()));
+ connect(actionDeformable_Registration,SIGNAL(triggered()),this,SLOT(ComputeDeformableRegistration()));
+ connect(actionWarp_image_with_vector_field,SIGNAL(triggered()),this,SLOT(WarpImage()));
+ connect(actionLoad_images,SIGNAL(triggered()),this,SLOT(OpenImages()));
+ connect(actionOpen_Dicom,SIGNAL(triggered()),this,SLOT(OpenDicom()));
+ connect(actionOpen_Dicom_Struct,SIGNAL(triggered()),this,SLOT(OpenDCStructContour()));
+ connect(actionOpen_VTK_contour,SIGNAL(triggered()),this,SLOT(OpenVTKContour()));
+ connect(actionOpen_Multiple_Images_As_One,SIGNAL(triggered()),this,SLOT(MergeImages()));
+ connect(actionSlice_Image_As_Multiple_Images,SIGNAL(triggered()),this,SLOT(SliceImages()));
+ connect(actionOpen_Image_With_Time,SIGNAL(triggered()),this,SLOT(OpenImageWithTime()));
+ connect(actionMerge_images_as_n_dim_t, SIGNAL(triggered()), this, SLOT(MergeImagesWithTime()));
+ connect(actionSave_As,SIGNAL(triggered()),this,SLOT(SaveAs()));
+ connect(actionExit,SIGNAL(triggered()),this,SLOT(close()));
+ connect(actionAdd_VF_to_current_Image,SIGNAL(triggered()),this,SLOT(OpenField()));
+ connect(actionNavigation_Help,SIGNAL(triggered()),this,SLOT(ShowHelpDialog()));
+ connect(actionDocumentation,SIGNAL(triggered()),this,SLOT(ShowDocumentation()));
+
+ ///////////////////////////////////////////////
+ connect(actionSegmentation,SIGNAL(triggered()),this,SLOT(SegmentationOnCurrentImage()));
+ connect(actionSurface_Viewer,SIGNAL(triggered()),this,SLOT(SurfaceViewerLaunch()));
+ ///////////////////////////////////////////////
+
+ actionNorth_East_Window->setEnabled(0);
+ actionNorth_West_Window->setEnabled(0);
+ actionSouth_East_Window->setEnabled(0);
+ actionSouth_West_Window->setEnabled(0);
+
+ connect(actionNorth_East_Window,SIGNAL(triggered()),this,SLOT(SaveNEScreenshot()));
+ connect(actionNorth_West_Window,SIGNAL(triggered()),this,SLOT(SaveNOScreenshot()));
+ connect(actionSouth_East_Window,SIGNAL(triggered()),this,SLOT(SaveSEScreenshot()));
+ connect(actionSouth_West_Window,SIGNAL(triggered()),this,SLOT(SaveSOScreenshot()));
+
+ connect(DataTree,SIGNAL(itemSelectionChanged()),this,SLOT(ImageInfoChanged()));
+ connect(DataTree,SIGNAL(itemClicked(QTreeWidgetItem*, int)),this,
+ SLOT(DisplayChanged(QTreeWidgetItem*, int)));
+
+ connect(viewButton,SIGNAL(clicked()),this, SLOT(ChangeViewMode()) );
+ connect(windowSpinBox,SIGNAL(editingFinished()),this,SLOT(WindowLevelEdited()));
+ connect(levelSpinBox,SIGNAL(editingFinished()),this,SLOT(WindowLevelEdited()));
+ connect(colorMapComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateColorMap()));
+ connect(presetComboBox,SIGNAL(currentIndexChanged(int)),this,SLOT(UpdateWindowLevel()));
+ connect(inverseButton,SIGNAL(clicked()),this,SLOT(SwitchWindowLevel()));
+ connect(applyWindowLevelToAllButton,SIGNAL(clicked()),this,SLOT(ApplyWindowLevelToAllImages()));
+
+
+ connect(this,SIGNAL(customContextMenuRequested(QPoint)),this,SLOT(ShowContextMenu(QPoint)));
+
+ connect(linkPanel,SIGNAL(addLink(QString,QString)),this,SLOT(AddLink(QString,QString)));
+ connect(linkPanel,SIGNAL(removeLink(QString,QString)),this,SLOT(RemoveLink(QString,QString)));
+ connect(overlayPanel,SIGNAL(VFPropertyUpdated(int,int,int,int,double,double,double)),this,SLOT(SetVFProperty(int,int,int,int,double,double,double)));
+ connect(overlayPanel,SIGNAL(OverlayPropertyUpdated(int)),this,SLOT(SetOverlayProperty(int)));
+ connect(overlayPanel,SIGNAL(FusionPropertyUpdated(int,int,double,double)),
+ this,SLOT(SetFusionProperty(int,int,double,double)));
+ connect(landmarksPanel,SIGNAL(UpdateRenderWindows()),this,SLOT(UpdateRenderWindows()));
+
+ playMode = 0;//pause
+ mFrameRate = 10;
+ playButton->setEnabled(0);
+ frameRateLabel->setEnabled(0);
+ frameRateSpinBox->setEnabled(0);
+ connect(playButton, SIGNAL(clicked()),this,SLOT(PlayPause()));
+ connect(frameRateSpinBox, SIGNAL(valueChanged(int)),this,SLOT(ChangeFrameRate(int)));
+
+ goToCursorPushButton->setEnabled(0);
+ connect(goToCursorPushButton, SIGNAL(clicked()),this,SLOT(GoToCursor()));
+
+ NOViewWidget->hide();
+ NEViewWidget->hide();
+ SOViewWidget->hide();
+ SEViewWidget->hide();
+
+ //Recently opened files
+ std::list<std::string> recent_files = GetRecentlyOpenedImages();
+ if ( !recent_files.empty() ) {
+ QMenu * rmenu = new QMenu("Recently opened files...");
+ rmenu->setIcon(QIcon(QString::fromUtf8(":/common/icons/open.png")));
+ menuFile->insertMenu(actionOpen_Image_With_Time,rmenu);
+ menuFile->insertSeparator(actionOpen_Image_With_Time);
+ for (std::list<std::string>::iterator i = recent_files.begin(); i!=recent_files.end(); i++) {
+ QAction* current=new QAction(QIcon(QString::fromUtf8(":/common/icons/open.png")),
+ (*i).c_str(),this);
+ rmenu->addAction(current);
+ connect(current,SIGNAL(triggered()),this,SLOT(OpenRecentImage()));
+ }
+ }
+
+ // Adding all new tools (insertion in the menu)
+ vvToolManager::GetInstance()->InsertToolsInMenu(this);
+
+ if (!CLITK_EXPERIMENTAL)
+ menuExperimental->menuAction()->setVisible(false);
+
+
+ QTimer * timerMemory = new QTimer(this);
+ //timerMemory->setInterval(5);
+ connect(timerMemory, SIGNAL(timeout()), this, SLOT(UpdateMemoryUsage()));
+ timerMemory->start(2000);
+
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateMemoryUsage()
+{
+ // clitk::PrintMemory(true);
+ if (clitk::GetMemoryUsageInMb() == 0) infoPanel->setMemoryInMb("NA");
+ else infoPanel->setMemoryInMb(QString::number(clitk::GetMemoryUsageInMb())+" MiB");
}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
void vvMainWindow::ComputeMidPosition()
{
- bool ok;
- int index=GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- int ref = QInputDialog::getInteger(this,"Chose reference phase","Reference phase",0,0,\
- mSlicerManagers[index]->GetImage()->GetVTKImages().size()-1,1,&ok);
- if (ok)
- {
- vvMidPosition midp;
- midp.slicer_manager = mSlicerManagers[index];
- midp.reference_image_index = ref;
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- midp.Update();
- if (midp.error)
- QMessageBox::warning(this, "Error computing midposition image",midp.error_message.c_str());
- else
- {
- QFileInfo info(midp.slicer_manager->GetFileName().c_str());
- AddImage(midp.output,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_midposition.mhd");
- }
- QApplication::restoreOverrideCursor();
+ bool ok;
+ int index=GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ int ref = QInputDialog::getInteger(this,"Chose reference phase","Reference phase",0,0,\
+ mSlicerManagers[index]->GetImage()->GetVTKImages().size()-1,1,&ok);
+ if (ok) {
+ vvMidPosition midp;
+ midp.slicer_manager = mSlicerManagers[index];
+ midp.reference_image_index = ref;
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ midp.Update();
+ if (midp.error)
+ QMessageBox::warning(this, "Error computing midposition image",midp.error_message.c_str());
+ else {
+ QFileInfo info(midp.slicer_manager->GetFileName().c_str());
+ AddImage(midp.output,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_midposition.mhd");
}
+ QApplication::restoreOverrideCursor();
+ }
}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
void vvMainWindow::AddContour(int image_index, vvMesh::Pointer contour, bool propagation)
{
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,"filename.vtk");
- item->setData(1,Qt::UserRole,tr("contour"));
- QBrush brush;
- brush.setColor(QColor(contour->r*255,contour->g*255,contour->b*255));
- brush.setStyle(Qt::SolidPattern);
- item->setData(COLUMN_IMAGE_NAME,Qt::BackgroundRole,brush);
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,contour->structure_name.c_str());
-
- for (int j = 1; j <= 4; j++)
- item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(image_index)->data(j,Qt::CheckStateRole));
-
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close image"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
-
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload image"));
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- rButton->setEnabled(false);
- //Not implemented
- //connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- //this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
-
- DataTree->topLevelItem(image_index)->setExpanded(1);
- DataTree->topLevelItem(image_index)->addChild(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
- QString id = DataTree->topLevelItem(image_index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
-
- UpdateTree();
- mSlicerManagers[image_index]->AddContour(contour,propagation);
- mSlicerManagers[image_index]->Render();
-}
-
-//====================================================================
+ QTreeWidgetItem *item = new QTreeWidgetItem();
+ item->setData(0,Qt::UserRole,"filename.vtk");
+ item->setData(1,Qt::UserRole,tr("contour"));
+ QBrush brush;
+ brush.setColor(QColor(contour->r*255,contour->g*255,contour->b*255));
+ brush.setStyle(Qt::SolidPattern);
+ item->setData(COLUMN_IMAGE_NAME,Qt::BackgroundRole,brush);
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,contour->structure_name.c_str());
+
+ for (int j = 1; j <= 4; j++)
+ item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(image_index)->data(j,Qt::CheckStateRole));
+
+ QTreePushButton* cButton = new QTreePushButton;
+ cButton->setItem(item);
+ cButton->setColumn(COLUMN_CLOSE_IMAGE);
+ cButton->setToolTip(tr("close image"));
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
+ connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(CloseImage(QTreeWidgetItem*, int)));
+
+ QTreePushButton* rButton = new QTreePushButton;
+ rButton->setItem(item);
+ rButton->setColumn(COLUMN_RELOAD_IMAGE);
+ rButton->setToolTip(tr("reload image"));
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
+ rButton->setEnabled(false);
+ //Not implemented
+ //connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ //this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
+
+ DataTree->topLevelItem(image_index)->setExpanded(1);
+ DataTree->topLevelItem(image_index)->addChild(item);
+ DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
+ QString id = DataTree->topLevelItem(image_index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
+ item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
+
+ UpdateTree();
+ mSlicerManagers[image_index]->AddContour(contour,propagation);
+ mSlicerManagers[image_index]->Render();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
void vvMainWindow::OpenVTKContour()
{
- if (mSlicerManagers.size() > 0)
- {
- QString Extensions = "Images ( *.vtk)";
- Extensions += ";;All Files (*)";
- QString file = QFileDialog::getOpenFileName(this,tr("Open vtkPolyData"),mInputPathName,Extensions);
- if (file.isNull())
- return;
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- vvMeshReader reader;
- reader.SetModeToVTK();
- reader.SetFilename(file.toStdString());
- reader.Update();
- AddContour(index,reader.GetOutput()[0],false);
- QApplication::restoreOverrideCursor();
- }
+ if (mSlicerManagers.size() > 0) {
+ QString Extensions = "Images ( *.vtk *.obj)";
+ Extensions += ";;All Files (*)";
+ QString file = QFileDialog::getOpenFileName(this,tr("Open vtkPolyData"),mInputPathName,Extensions);
+ if (file.isNull())
+ return;
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ vvMeshReader reader;
+ reader.SetImage(mSlicerManagers[index]->GetImage());
+ reader.SetModeToVTK();
+ reader.SetFilename(file.toStdString());
+ reader.Update();
+ AddContour(index,reader.GetOutput()[0],false);
+ QApplication::restoreOverrideCursor();
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
void vvMainWindow::OpenDCStructContour()
{
- if (mSlicerManagers.size() > 0)
- {
- QString Extensions = "Dicom Files ( *.dcm)";
- Extensions += ";;All Files (*)";
- QString file = QFileDialog::getOpenFileName(this,tr("Merge Images"),mInputPathName,Extensions);
- if (file.isNull())
- return;
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- vvMeshReader reader;
- reader.SetFilename(file.toStdString());
- vvStructSelector selector;
- selector.SetStructures(reader.GetROINames());
- if (!mSlicerManagers[index]->GetVF().IsNull())
- selector.EnablePropagationCheckBox();
- if (selector.exec())
- {
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- reader.SetSelectedItems(selector.getSelectedItems());
- reader.SetImage(mSlicerManagers[index]->GetImage());
- if (selector.PropagationEnabled())
- reader.SetPropagationVF(mSlicerManagers[index]->GetVF());
- reader.Update();
- std::vector<vvMesh::Pointer> contours=reader.GetOutput();
- for (std::vector<vvMesh::Pointer>::iterator i=contours.begin();
- i!=contours.end();i++)
- AddContour(index,*i,selector.PropagationEnabled());
- QApplication::restoreOverrideCursor();
- }
- }
-}
-
-//====================================================================
+ if (mSlicerManagers.size() > 0) {
+ QString Extensions = "Dicom Files ( *.dcm RS*)";
+ Extensions += ";;All Files (*)";
+ QString file = QFileDialog::getOpenFileName(this,tr("Merge Images"),mInputPathName,Extensions);
+ if (file.isNull())
+ return;
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ vvMeshReader reader;
+ reader.SetFilename(file.toStdString());
+ vvStructSelector selector;
+ selector.SetStructures(reader.GetROINames());
+ if (!mSlicerManagers[index]->GetVF().IsNull())
+ selector.EnablePropagationCheckBox();
+ if (selector.exec()) {
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ reader.SetSelectedItems(selector.getSelectedItems());
+ reader.SetImage(mSlicerManagers[index]->GetImage());
+ if (selector.PropagationEnabled())
+ reader.SetPropagationVF(mSlicerManagers[index]->GetVF());
+ reader.Update();
+ std::vector<vvMesh::Pointer> contours=reader.GetOutput();
+ for (std::vector<vvMesh::Pointer>::iterator i=contours.begin();
+ i!=contours.end(); i++)
+ AddContour(index,*i,selector.PropagationEnabled());
+ QApplication::restoreOverrideCursor();
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
void vvMainWindow::ComputeDeformableRegistration()
{
- if (mSlicerManagers.size() > 0)
- {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- vvDeformationDialog dialog(index,mSlicerManagers);
- if (dialog.exec())
- {
- std::string base_name=itksys::SystemTools::GetFilenameWithoutExtension(mSlicerManagers[dialog.GetInputFileIndex()]->GetFileName());
- AddField(dialog.GetOutput(),dialog.getFieldFile(),dialog.GetInputFileIndex());
- WarpImage(dialog.GetSelectedSlicer(),dialog.GetReferenceFrameIndex());
- }
- else
- std::cout << "Error or user cancellation while computing deformation field..." << std::endl;
- }
- else QMessageBox::information(this, "Need to open image","You must open an image first.");
+ if (mSlicerManagers.size() > 0) {
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ vvDeformationDialog dialog(index,mSlicerManagers);
+ if (dialog.exec()) {
+ std::string base_name=itksys::SystemTools::GetFilenameWithoutExtension(mSlicerManagers[dialog.GetInputFileIndex()]->GetFileName());
+ AddField(dialog.GetOutput(),dialog.getFieldFile(),dialog.GetInputFileIndex());
+ WarpImage(dialog.GetSelectedSlicer(),dialog.GetReferenceFrameIndex());
+ } else
+ std::cout << "Error or user cancellation while computing deformation field..." << std::endl;
+ } else QMessageBox::information(this, "Need to open image","You must open an image first.");
}
+//------------------------------------------------------------------------------
+
-//====================================================================
+//------------------------------------------------------------------------------
void vvMainWindow::WarpImage()
{
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- if (!mSlicerManagers[index]->GetVF().IsNull())
- {
- bool ok;
- int ref = QInputDialog::getInteger(this,"Chose reference phase","Reference phase",0,0,\
- mSlicerManagers[index]->GetImage()->GetVTKImages().size()-1,1,&ok);
- if (ok)
- {
- WarpImage(mSlicerManagers[index],ref);
- }
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ if (!mSlicerManagers[index]->GetVF().IsNull()) {
+ bool ok;
+ int ref = QInputDialog::getInteger(this,"Chose reference phase","Reference phase",0,0,\
+ mSlicerManagers[index]->GetImage()->GetVTKImages().size()-1,1,&ok);
+ if (ok) {
+ WarpImage(mSlicerManagers[index],ref);
}
- else
- QMessageBox::warning(this,tr("No vector field"),tr("Sorry, can't warp without a vector field"));
+ } else
+ QMessageBox::warning(this,tr("No vector field"),tr("Sorry, can't warp without a vector field"));
}
+//------------------------------------------------------------------------------
+
-//====================================================================
+//------------------------------------------------------------------------------
void vvMainWindow::WarpImage(vvSlicerManager* selected_slicer,int reference_phase)
{
- if (!selected_slicer->GetVF().IsNull())
- {
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- QFileInfo info(selected_slicer->GetFileName().c_str());
- vvImageWarp warp(selected_slicer->GetImage(),selected_slicer->GetVF(),
- reference_phase,this);
- if (warp.ComputeWarpedImage())
- {
- AddImage(warp.GetWarpedImage(),info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_warped.mhd");
- AddImage(warp.GetDiffImage() ,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_diff.mhd");
- AddImage(warp.GetJacobianImage() ,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_jacobian.mhd");
- QApplication::restoreOverrideCursor();
- }
- else
- {
- QApplication::restoreOverrideCursor();
- QMessageBox::warning(this,tr("Different spacings"),tr("The vector field and image spacings must be the same in order to warp."));
- }
+ if (!selected_slicer->GetVF().IsNull()) {
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ QFileInfo info(selected_slicer->GetFileName().c_str());
+ vvImageWarp warp(selected_slicer->GetImage(),selected_slicer->GetVF(),
+ reference_phase,this);
+ if (warp.ComputeWarpedImage()) {
+ AddImage(warp.GetWarpedImage(),info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_warped.mhd");
+ AddImage(warp.GetDiffImage() ,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_diff.mhd");
+ AddImage(warp.GetJacobianImage() ,info.path().toStdString()+"/"+info.completeBaseName().toStdString()+"_jacobian.mhd");
+ QApplication::restoreOverrideCursor();
+ } else {
+ QApplication::restoreOverrideCursor();
+ QMessageBox::warning(this,tr("Different spacings"),tr("The vector field and image spacings must be the same in order to warp."));
}
- else
- QMessageBox::warning(this,tr("No vector field"),tr("Sorry, can't warp without a vector field."));
+ } else
+ QMessageBox::warning(this,tr("No vector field"),tr("Sorry, can't warp without a vector field."));
}
+//------------------------------------------------------------------------------
-//====================================================================
-vvMainWindow::~vvMainWindow() {
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (mSlicerManagers[i] != NULL)
- delete mSlicerManagers[i];
- }
-}
-//====================================================================
-//====================================================================
-void vvMainWindow::MergeImages() {
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images"),mInputPathName,Extensions);
- if (files.isEmpty())
- return;
- mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
- std::vector<std::string> vector;
-
- unsigned int currentDim = 0;
- std::vector<double> currentSpacing;
- std::vector<int> currentSize;
- std::vector<double> currentOrigin;
-
- for (int i = 0; i < files.size(); i++)
- {
- itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
- files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode);
- reader->SetFileName(files[i].toStdString().c_str());
- reader->ReadImageInformation();
- if (reader) NOViewWidget->hide();
- NEViewWidget->hide();
- SOViewWidget->hide();
- SEViewWidget->hide();
- {
- if (i == 0)
- currentDim = reader->GetNumberOfDimensions();
- bool IsOk = true;
- for (unsigned int j = 0;j < currentDim; j++)
- {
- if (i == 0)
- {
- if (j == 0)
- {
- currentSpacing.resize(currentDim);
- currentSize.resize(currentDim);
- currentOrigin.resize(currentDim);
- }
- currentOrigin[j] = reader->GetOrigin(j);
- currentSpacing[j] = reader->GetSpacing(j);
- currentSize[j] = reader->GetDimensions(j);
- }
- else if (currentDim != reader->GetNumberOfDimensions()
- || currentSpacing[j] != reader->GetSpacing(j)
- || currentSize[j] != (int)reader->GetDimensions(j)
- || currentOrigin[j] != reader->GetOrigin(j))
- {
- QString error = "Cannot read file (too different from others ";
- error += files[i].toStdString().c_str();
- QMessageBox::information(this,tr("Reading problem"),error);
- IsOk = false;
- break;
- }
- }
- if (IsOk)
- vector.push_back(files[i].toStdString());
- }
- }
- if (vector.size() > 0)
- LoadImages(vector, MERGED);
+//------------------------------------------------------------------------------
+vvMainWindow::~vvMainWindow()
+{
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (mSlicerManagers[i] != NULL)
+ delete mSlicerManagers[i];
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::MergeImagesWithTime() {
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images With Time"),mInputPathName,Extensions);
- if (files.isEmpty())
- return;
- mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
- std::vector<std::string> vector;
-
- unsigned int currentDim = 0;
- std::vector<double> currentSpacing;
- std::vector<int> currentSize;
- std::vector<double> currentOrigin;
-
- for (int i = 0; i < files.size(); i++)
- {
- itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
- files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode);
- if (reader)
- {
- reader->SetFileName(files[i].toStdString().c_str());
- reader->ReadImageInformation();
- if (i == 0)
- currentDim = reader->GetNumberOfDimensions();
- bool IsOk = true;
- for (unsigned int j = 0;j < currentDim; j++)
- {
- if (i == 0)
- {
- if (j == 0)
- {
- currentSpacing.resize(currentDim);
- currentSize.resize(currentDim);
- currentOrigin.resize(currentDim);
- }
- currentOrigin[j] = reader->GetOrigin(j);
- currentSpacing[j] = reader->GetSpacing(j);
- currentSize[j] = reader->GetDimensions(j);
- }
- else if (currentDim != reader->GetNumberOfDimensions()
- || currentSpacing[j] != reader->GetSpacing(j)
- || currentSize[j] != (int)reader->GetDimensions(j)
- || currentOrigin[j] != reader->GetOrigin(j))
- {
- QString error = "Cannot read file (too different from others ";
- error += files[i].toStdString().c_str();
- QMessageBox::information(this,tr("Reading problem"),error);
- IsOk = false;
- break;
- }
- }
- if (IsOk)
- vector.push_back(files[i].toStdString());
- }
- else
- {
- QString error = "Cannot read file info for ";
- error += files[i].toStdString().c_str();
- error += "\n";
- error += "Maybe you're trying to open an image in an unsupported format?\n";
- QMessageBox::information(this,tr("Reading problem"),error);
- }
- }
- sort(vector.begin(),vector.end());
- if (vector.size() > 1)
- LoadImages(vector, MERGEDWITHTIME);
- else
- QMessageBox::warning(this,tr("Reading problem"),"You need to select at least two images to merge images with time.\nIf you only want to open one image, please use the \"Open Image\" function.");
+//------------------------------------------------------------------------------
+QTabWidget * vvMainWindow::GetTab()
+{
+ return tabWidget;
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::OpenDicom() {
- std::vector<std::string> files;
+//------------------------------------------------------------------------------
-#ifdef CLITK_VV_USE_BDCM
- bool r = bdcm::OpenDicomFilesSelectorDialog(files,
- "DicomFilesSelectorDialog test",
- 0,0,800,800,1);
-
- if (r) {
- std::cout << "$$$$ main : user clicked 'OK' $$$$"<<std::endl;
- std::cout << "$$$$ selected files : "<<std::endl;
- std::vector<std::string>::iterator i;
- for (i=files.begin();i!=files.end();++i) {
- std::cout << *i << std::endl;
- }
- std::cout << "$$$$ "<<std::endl;
- LoadImages(files,DICOM);
- }
- else {
- std::cout << "$$$$ main : user clicked 'CANCEL' $$$$"<<std::endl;
- }
-#else
- std::cout << "dicomSeriesSelector " << std::endl;
- if (dicomSeriesSelector->exec() == QDialog::Accepted) {
- files = *(dicomSeriesSelector->GetFilenames());
- LoadImages(files,DICOM);
+//------------------------------------------------------------------------------
+void vvMainWindow::MergeImages()
+{
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+ QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images"),mInputPathName,Extensions);
+ if (files.isEmpty())
+ return;
+ mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
+ std::vector<std::string> vector;
+
+ unsigned int currentDim = 0;
+ std::vector<double> currentSpacing;
+ std::vector<int> currentSize;
+ std::vector<double> currentOrigin;
+
+ for (int i = 0; i < files.size(); i++) {
+ itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
+ files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode);
+ reader->SetFileName(files[i].toStdString().c_str());
+ reader->ReadImageInformation();
+ if (reader) {
+ //NOViewWidget->hide();
+ //NEViewWidget->hide();
+ //SOViewWidget->hide();
+ //SEViewWidget->hide();
+ if (i == 0)
+ currentDim = reader->GetNumberOfDimensions();
+ bool IsOk = true;
+ for (unsigned int j = 0; j < currentDim; j++) {
+ if (i == 0) {
+ if (j == 0) {
+ currentSpacing.resize(currentDim);
+ currentSize.resize(currentDim);
+ currentOrigin.resize(currentDim);
+ }
+ currentOrigin[j] = reader->GetOrigin(j);
+ currentSpacing[j] = reader->GetSpacing(j);
+ currentSize[j] = reader->GetDimensions(j);
+ } else if (currentDim != reader->GetNumberOfDimensions()
+ || currentSpacing[j] != reader->GetSpacing(j)
+ || currentSize[j] != (int)reader->GetDimensions(j)
+ || currentOrigin[j] != reader->GetOrigin(j)) {
+ QString error = "Cannot read file (too different from others ";
+ error += files[i].toStdString().c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ IsOk = false;
+ break;
+ }
+ }
+ if (IsOk)
+ vector.push_back(files[i].toStdString());
}
-#endif
+ }
+ if (vector.size() > 0)
+ LoadImages(vector, vvImageReader::MERGED);
+}
+//------------------------------------------------------------------------------
+//------------------------------------------------------------------------------
+void vvMainWindow::SliceImages()
+{
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+
+ QStringList files = QFileDialog::getOpenFileNames(this,tr("Slice Images"),mInputPathName,Extensions);
+ if (files.isEmpty())
+ return;
+ mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
+ std::vector<std::string> vector;
+ for (int i = 0; i < files.size(); i++)
+ vector.push_back(files[i].toStdString());
+ LoadImages(vector, vvImageReader::SLICED);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::MergeImagesWithTime()
+{
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+ QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images With Time"),mInputPathName,Extensions);
+ if (files.isEmpty())
+ return;
+ mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
+ std::vector<std::string> vector;
+
+ unsigned int currentDim = 0;
+ std::vector<double> currentSpacing;
+ std::vector<int> currentSize;
+ std::vector<double> currentOrigin;
+
+ for (int i = 0; i < files.size(); i++) {
+ itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
+ files[i].toStdString().c_str(), itk::ImageIOFactory::ReadMode);
+ if (reader) {
+ reader->SetFileName(files[i].toStdString().c_str());
+ reader->ReadImageInformation();
+ if (i == 0)
+ currentDim = reader->GetNumberOfDimensions();
+ bool IsOk = true;
+ for (unsigned int j = 0; j < currentDim; j++) {
+ if (i == 0) {
+ if (j == 0) {
+ currentSpacing.resize(currentDim);
+ currentSize.resize(currentDim);
+ currentOrigin.resize(currentDim);
+ }
+ currentOrigin[j] = reader->GetOrigin(j);
+ currentSpacing[j] = reader->GetSpacing(j);
+ currentSize[j] = reader->GetDimensions(j);
+ } else if (currentDim != reader->GetNumberOfDimensions()
+ || currentSpacing[j] != reader->GetSpacing(j)
+ || currentSize[j] != (int)reader->GetDimensions(j)
+ || currentOrigin[j] != reader->GetOrigin(j)) {
+ QString error = "Cannot read file (too different from others ";
+ error += files[i].toStdString().c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ IsOk = false;
+ break;
+ }
+ }
+ if (IsOk)
+ vector.push_back(files[i].toStdString());
+ } else {
+ QString error = "Cannot read file info for ";
+ error += files[i].toStdString().c_str();
+ error += "\n";
+ error += "Maybe you're trying to open an image in an unsupported format?\n";
+ QMessageBox::information(this,tr("Reading problem"),error);
+ }
+ }
+ sort(vector.begin(),vector.end());
+ if (vector.size() > 1)
+ LoadImages(vector, vvImageReader::MERGEDWITHTIME);
+ else
+ QMessageBox::warning(this,tr("Reading problem"),"You need to select at least two images to merge images with time.\nIf you only want to open one image, please use the \"Open Image\" function.");
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::OpenImages() {
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QStringList files = QFileDialog::getOpenFileNames(this,tr("Load Images"),mInputPathName,Extensions);
- if (files.isEmpty())
- return;
- mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
- std::vector<std::string> vector;
- for (int i = 0; i < files.size(); i++)
- vector.push_back(files[i].toStdString());
- LoadImages(vector, IMAGE);
+//------------------------------------------------------------------------------
+void vvMainWindow::OpenDicom()
+{
+ std::vector<std::string> files;
+
+ std::cout << "dicomSeriesSelector " << std::endl;
+ if (dicomSeriesSelector->exec() == QDialog::Accepted) {
+ files = *(dicomSeriesSelector->GetFilenames());
+ LoadImages(files, vvImageReader::DICOM);
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::OpenImages()
+{
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+
+ QStringList files = QFileDialog::getOpenFileNames(this,tr("Load Images"),mInputPathName,Extensions);
+ if (files.isEmpty())
+ return;
+ mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
+ std::vector<std::string> vector;
+ for (int i = 0; i < files.size(); i++)
+ vector.push_back(files[i].toStdString());
+ LoadImages(vector, vvImageReader::IMAGE);
+}
+//------------------------------------------------------------------------------
void vvMainWindow::OpenRecentImage()
{
- QAction * caller = qobject_cast<QAction*>(sender());
- std::vector<std::string> images;
- images.push_back(caller->text().toStdString());
- mInputPathName = itksys::SystemTools::GetFilenamePath(images[0]).c_str();
- LoadImages(images,IMAGE);
+ QAction * caller = qobject_cast<QAction*>(sender());
+ std::vector<std::string> images;
+ images.push_back(caller->text().toStdString());
+ mInputPathName = itksys::SystemTools::GetFilenamePath(images[0]).c_str();
+ LoadImages(images, vvImageReader::IMAGE);
}
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::OpenImageWithTime() {
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QStringList files = QFileDialog::getOpenFileNames(this,tr("Load Images With Time"),mInputPathName,Extensions);
- if (files.isEmpty())
- return;
- mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
- std::vector<std::string> vector;
- for (int i = 0; i < files.size(); i++)
- {
- vector.push_back(files[i].toStdString());
- }
- LoadImages(vector, IMAGEWITHTIME);
+//------------------------------------------------------------------------------
+void vvMainWindow::OpenImageWithTime()
+{
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+
+ QStringList files = QFileDialog::getOpenFileNames(this,tr("Load Images With Time"),mInputPathName,Extensions);
+ if (files.isEmpty())
+ return;
+ mInputPathName = itksys::SystemTools::GetFilenamePath(files[0].toStdString()).c_str();
+ std::vector<std::string> vector;
+ for (int i = 0; i < files.size(); i++) {
+ vector.push_back(files[i].toStdString());
+ }
+ LoadImages(vector, vvImageReader::IMAGEWITHTIME);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::LoadImages(std::vector<std::string> files, LoadedImageType filetype) {
- //Separate the way to open images and dicoms
- int fileSize;
- if (filetype == IMAGE || filetype == IMAGEWITHTIME)
- fileSize = files.size();
- else
- fileSize = 1;
-
- //Only add to the list of recently opened files when a single file is opened,
- //to avoid polluting the list of recently opened files
- if (files.size() == 1)
- {
- QFileInfo finfo=tr(files[0].c_str());
- AddToRecentlyOpenedImages(finfo.absoluteFilePath().toStdString());
- }
- //init the progress events
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- vvProgressDialog progress("Opening " + files[0],fileSize>1);
- qApp->processEvents();
- int numberofsuccesulreads=0;
- //open images as 1 or multiples
+//------------------------------------------------------------------------------
+void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::LoadedImageType filetype)
+{
+ //Separate the way to open images and dicoms
+ int fileSize;
+ if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME)
+ fileSize = files.size();
+ else
+ fileSize = 1;
+
+ // For SLICED, we need the number of slices (ndim and #slices)
+ std::vector<unsigned int> nSlices;
+ nSlices.resize(files.size());
+ std::fill(nSlices.begin(), nSlices.end(), 1);
+ if (filetype == vvImageReader::SLICED) {
for (int i = 0; i < fileSize; i++) {
+ itk::ImageIOBase::Pointer header = clitk::readImageHeader(files[i]);
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ if (!header) {
+ nSlices[i] = 0;
+ QString error = "Cannot open file \n";
+ error += files[i].c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ return;
+ }
+ if (header->GetNumberOfDimensions() < 3) {
+ nSlices[i] = 0;
+ QString error = "Dimension problem. Cannot slice \n";
+ error += files[i].c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ return;
+ }
+ nSlices[i] = header->GetDimensions( header->GetNumberOfDimensions()-1 );
+ }
+ }
+
+ //Only add to the list of recently opened files when a single file is opened,
+ //to avoid polluting the list of recently opened files
+ if (files.size() == 1) {
+ QFileInfo finfo=tr(files[0].c_str());
+ AddToRecentlyOpenedImages(finfo.absoluteFilePath().toStdString());
+ }
+ //init the progress events
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ vvProgressDialog progress("Opening " + files[0],fileSize>1);
+ qApp->processEvents();
+
+ int numberofsuccesulreads=0;
+ //open images as 1 or multiples
+ for (int i = 0; i < fileSize; i++) {
+
+ progress.SetText("Opening " + files[i]);
+ progress.SetProgress(i,fileSize);
+ qApp->processEvents();
- progress.Update("Opening " + files[i]);
- progress.SetProgress(i,fileSize);
- qApp->processEvents();
+ for (unsigned int j = 0; j < nSlices[i]; j++) {
+ //read the image and put it in mSlicerManagers
+ vvSlicerManager* imageManager = new vvSlicerManager(4);
+ qApp->processEvents();
- //read the image and put it in mSlicerManagers
- vvSlicerManager* imageManager = new vvSlicerManager(4);
- qApp->processEvents();
+ bool SetImageSucceed=false;
- bool SetImageSucceed=false;
+ // Change filename if an image with the same already exist
+ int number = GetImageDuplicateFilenameNumber(files[i] + std::string("_slice"));
- if (filetype == IMAGE || filetype == IMAGEWITHTIME)
- SetImageSucceed = imageManager->SetImage(files[i],filetype);
- else
- {
- SetImageSucceed = imageManager->SetImages(files,filetype);
- }
- if (SetImageSucceed == false)
- {
- QApplication::restoreOverrideCursor();
- QString error = "Cannot open file \n";
- error += imageManager->GetLastError().c_str();
- QMessageBox::information(this,tr("Reading problem"),error);
- delete imageManager;
- }
- else
- {
- mSlicerManagers.push_back(imageManager);
-
- //create an item in the tree with good settings
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,files[i].c_str());
- QFileInfo fileinfo(imageManager->GetFileName().c_str()); //Do not show the path
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName());
- qApp->processEvents();
-
- //Create the buttons for reload and close
- qApp->processEvents();
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close image"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
-
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload image"));
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
-
- DataTree->addTopLevelItem(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
-
- //set the id of the image
- QString id = files[i].c_str() + QString::number(mSlicerManagers.size()-1);
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
- mSlicerManagers.back()->SetId(id.toStdString());
-
- linkPanel->addImage(imageManager->GetFileName(), id.toStdString());
-
- connect(mSlicerManagers.back(),SIGNAL(currentImageChanged(std::string)),
- this,SLOT(CurrentImageChanged(std::string)));
- connect(mSlicerManagers.back(),SIGNAL(
- UpdatePosition(int, double, double, double, double, double, double, double)),this,
- SLOT(MousePositionChanged(int,double, double, double, double, double, double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateVector(int, double, double, double, double)),
- this, SLOT(VectorChanged(int,double,double,double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateOverlay(int, double, double)),
- this, SLOT(OverlayChanged(int,double,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateFusion(int, double)),
- this, SLOT(FusionChanged(int,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateWindows(int, int, int)),
- this,SLOT(WindowsChanged(int, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(WindowLevelChanged(double, double,int, int)),
- this,SLOT(WindowLevelChanged(double, double, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSlice(int,int)),
- this,SLOT(UpdateSlice(int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateTSlice(int, int)),
- this,SLOT(UpdateTSlice(int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSliceRange(int,int,int,int,int)),
- this,SLOT(UpdateSliceRange(int,int,int,int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)),
- this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int)));
- connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
- InitSlicers();
- numberofsuccesulreads++;
- }
- }
- if (numberofsuccesulreads)
- {
- NOViewWidget->show();
- NEViewWidget->show();
- SOViewWidget->show();
- SEViewWidget->show();
- UpdateTree();
- InitDisplay();
- ShowLastImage();
- }
- QApplication::restoreOverrideCursor();
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::UpdateTree() {
- DataTree->resizeColumnToContents(COLUMN_TREE);
- DataTree->resizeColumnToContents(COLUMN_UL_VIEW);
- DataTree->resizeColumnToContents(COLUMN_UR_VIEW);
- DataTree->resizeColumnToContents(COLUMN_DL_VIEW);
- DataTree->resizeColumnToContents(COLUMN_DR_VIEW);
- DataTree->resizeColumnToContents(COLUMN_IMAGE_NAME);
- DataTree->resizeColumnToContents(COLUMN_CLOSE_IMAGE);
- DataTree->resizeColumnToContents(COLUMN_RELOAD_IMAGE);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::CurrentImageChanged(std::string id) {
- int selected = 0;
- for (int i = 0; i < DataTree->topLevelItemCount(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString().toStdString() == id)
- {
- selected = i;
- }
- else
- {
- DataTree->topLevelItem(i)->setSelected(0);
- }
- for (int child = 0; child < DataTree->topLevelItem(i)->childCount();child++)
- DataTree->topLevelItem(i)->child(child)->setSelected(0);
+ if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME || filetype == vvImageReader::SLICED)
+ SetImageSucceed = imageManager->SetImage(files[i],filetype, number, j);
+ else {
+ SetImageSucceed = imageManager->SetImages(files,filetype, number);
+ }
+ if (!SetImageSucceed) {
+ QApplication::restoreOverrideCursor();
+ QString error = "Cannot open file \n";
+ error += imageManager->GetLastError().c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ delete imageManager;
+ } else {
+ mSlicerManagers.push_back(imageManager);
- }
- DataTree->topLevelItem(selected)->setSelected(1);
-}
-//====================================================================
+ //create an item in the tree with good settings
+ QTreeWidgetItem *item = new QTreeWidgetItem();
+ item->setData(0,Qt::UserRole,files[i].c_str());
+ QFileInfo fileinfo(imageManager->GetFileName().c_str()); //Do not show the path
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName());
+ item->setToolTip(COLUMN_IMAGE_NAME,fileinfo.absoluteFilePath());
+ qApp->processEvents();
-//====================================================================
-void vvMainWindow::ImageInfoChanged() {
- contextActions[7]->setEnabled(1);
- contextActions[6]->setEnabled(1);
- actionSave_As->setEnabled(1);
- actionAdd_VF_to_current_Image->setEnabled(1);
- actionAdd_fusion_image->setEnabled(1);
- actionNorth_East_Window->setEnabled(1);
- actionNorth_West_Window->setEnabled(1);
- actionSouth_East_Window->setEnabled(1);
- actionSouth_West_Window->setEnabled(1);
- inverseButton->setEnabled(1);
-
- goToCursorPushButton->setEnabled(1);
-
- if (DataTree->selectedItems().size()) {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
-
- colorMapComboBox->setEnabled(1);
- for (int i = 0; i < DataTree->topLevelItem(index)->childCount();i++)
- {
- if (DataTree->topLevelItem(index)->child(i)->data(1,Qt::UserRole).toString() == "overlay" ||
- DataTree->topLevelItem(index)->child(i)->data(1,Qt::UserRole).toString() == "fusion")
- {
- colorMapComboBox->setEnabled(0);
- break;
- }
- }
+ //Create the buttons for reload and close
+ qApp->processEvents();
+ QTreePushButton* cButton = new QTreePushButton;
+ cButton->setItem(item);
+ cButton->setColumn(COLUMN_CLOSE_IMAGE);
+ cButton->setToolTip(tr("close image"));
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
+ connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(CloseImage(QTreeWidgetItem*, int)));
- std::vector<double> origin;
- std::vector<double> inputSpacing;
- std::vector<int> inputSize;
- std::vector<double> sizeMM;
- int dimension=0;
- QString pixelType;
- QString inputSizeInBytes;
- QString image = DataTree->selectedItems()[0]->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
-
- if (mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size() > 1 || playMode == 1)
- {
- playButton->setEnabled(1);
- frameRateLabel->setEnabled(1);
- frameRateSpinBox->setEnabled(1);
- }
- else
- {
- playButton->setEnabled(0);
- frameRateLabel->setEnabled(0);
- frameRateSpinBox->setEnabled(0);
- }
+ QTreePushButton* rButton = new QTreePushButton;
+ rButton->setItem(item);
+ rButton->setColumn(COLUMN_RELOAD_IMAGE);
+ rButton->setToolTip(tr("reload image"));
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
+ connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
- //read image header
- int NPixel = 1;
-
- if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0])
- {
- vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage();
- dimension = imageSelected->GetNumberOfDimensions();
- origin.resize(dimension);
- inputSpacing.resize(dimension);
- inputSize.resize(dimension);
- sizeMM.resize(dimension);
- pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsString().c_str();
- for (int i = 0;i < dimension;i++)
- {
- origin[i] = imageSelected->GetOrigin()[i];
- inputSpacing[i] = imageSelected->GetSpacing()[i];
- inputSize[i] = imageSelected->GetSize()[i];
- sizeMM[i] = inputSize[i]*inputSpacing[i];
- NPixel *= inputSize[i];
- }
- inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
- }
- else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector")
- {
- vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF();
- dimension = imageSelected->GetNumberOfDimensions();
- origin.resize(dimension);
- inputSpacing.resize(dimension);
- inputSize.resize(dimension);
- sizeMM.resize(dimension);
- pixelType = mSlicerManagers[index]->GetVF()->GetScalarTypeAsString().c_str();
- for (int i = 0;i < dimension;i++)
- {
- origin[i] = imageSelected->GetOrigin()[i];
- inputSpacing[i] = imageSelected->GetSpacing()[i];
- inputSize[i] = imageSelected->GetSize()[i];
- sizeMM[i] = inputSize[i]*inputSpacing[i];
- NPixel *= inputSize[i];
- }
- inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
- }
- else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay")
- {
- vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay();
- dimension = imageSelected->GetNumberOfDimensions();
- origin.resize(dimension);
- inputSpacing.resize(dimension);
- inputSize.resize(dimension);
- sizeMM.resize(dimension);
- pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsString().c_str();
- for (int i = 0;i < dimension;i++)
- {
- origin[i] = imageSelected->GetOrigin()[i];
- inputSpacing[i] = imageSelected->GetSpacing()[i];
- inputSize[i] = imageSelected->GetSize()[i];
- sizeMM[i] = inputSize[i]*inputSpacing[i];
- NPixel *= inputSize[i];
- }
- inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
- }
- else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion")
- {
- vvImage::Pointer imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion();
- dimension = imageSelected->GetNumberOfDimensions();
- origin.resize(dimension);
- inputSpacing.resize(dimension);
- inputSize.resize(dimension);
- sizeMM.resize(dimension);
- pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsString().c_str();
- for (int i = 0;i < dimension;i++)
- {
- origin[i] = imageSelected->GetOrigin()[i];
- inputSpacing[i] = imageSelected->GetSpacing()[i];
- inputSize[i] = imageSelected->GetSize()[i];
- sizeMM[i] = inputSize[i]*inputSpacing[i];
- NPixel *= inputSize[i];
- }
- inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
- }
+ DataTree->addTopLevelItem(item);
+ DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
- QString dim = QString::number(dimension) + " (";
- dim += pixelType + ")";
-
- infoPanel->setFileName(image);
- infoPanel->setDimension(dim);
- infoPanel->setSizePixel(GetVectorIntAsString(inputSize));
- infoPanel->setSizeMM(GetVectorDoubleAsString(sizeMM));
- infoPanel->setOrigin(GetVectorDoubleAsString(origin));
- infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing));
- infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")");
-
- landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(),
- mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size());
- landmarksPanel->SetCurrentPath(mInputPathName.toStdString());
- landmarksPanel->SetCurrentImage(mSlicerManagers[index]->GetFileName().c_str());
-
- overlayPanel->getCurrentImageName(mSlicerManagers[index]->GetFileName().c_str());
- for (int i = 0; i < 4;i++)
- {
- if (DataTree->selectedItems()[0]->data(i+1,Qt::CheckStateRole).toInt() > 0 || i == 3)
- {
- mSlicerManagers[index]->UpdateInfoOnCursorPosition(i);
- break;
- }
- }
- windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow());
- levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel());
- presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset());
- colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap());
-
- if (mSlicerManagers[index]->GetSlicer(0)->GetVF())
- {
- overlayPanel->getVFName(mSlicerManagers[index]->GetVFName().c_str());
- overlayPanel->getVFProperty(mSlicerManagers[index]->GetSlicer(0)->GetVFSubSampling(),
- mSlicerManagers[index]->GetSlicer(0)->GetVFScale(),
- mSlicerManagers[index]->GetSlicer(0)->GetVFLog());
- }
- else
- {
- overlayPanel->getVFName(mSlicerManagers[index]->GetVFName().c_str());
- overlayPanel->getVFProperty(-1,-1,-1);
- }
- if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay())
- {
- overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str());
- overlayPanel->getOverlayProperty(mSlicerManagers[index]->GetOverlayColor());
- }
- else
- {
- overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str());
- overlayPanel->getOverlayProperty(-1);
- }
- if (mSlicerManagers[index]->GetSlicer(0)->GetFusion())
- {
- overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
- overlayPanel->getFusionProperty(mSlicerManagers[index]->GetFusionOpacity(),
- mSlicerManagers[index]->GetFusionColorMap(),
- mSlicerManagers[index]->GetFusionWindow(),
- mSlicerManagers[index]->GetFusionLevel());
- }
- else
- {
- overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
- overlayPanel->getFusionProperty(-1, -1,-1,-1);
- }
+ //set the id of the image
+ QString id = files[i].c_str() + QString::number(mSlicerManagers.size()-1);
+ item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
+ mSlicerManagers.back()->SetId(id.toStdString());
+
+ linkPanel->addImage(imageManager->GetFileName(), id.toStdString());
+
+ connect(mSlicerManagers.back(), SIGNAL(currentImageChanged(std::string)),
+ this,SLOT(CurrentImageChanged(std::string)));
+ connect(mSlicerManagers.back(), SIGNAL(currentPickedImageChanged(std::string)),
+ this, SLOT(CurrentPickedImageChanged(std::string)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdatePosition(int, double, double, double, double, double, double, double)),
+ this,SLOT(MousePositionChanged(int,double, double, double, double, double, double, double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateVector(int, double, double, double, double)),
+ this, SLOT(VectorChanged(int,double,double,double, double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateOverlay(int, double, double)),
+ this, SLOT(OverlayChanged(int,double,double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)),
+ this, SLOT(FusionChanged(int,double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateWindows(int, int, int)),
+ this,SLOT(WindowsChanged(int, int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)),
+ this,SLOT(WindowLevelChanged(double, double, int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)),
+ this,SLOT(UpdateSlice(int,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateTSlice(int, int)),
+ this,SLOT(UpdateTSlice(int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateSliceRange(int,int,int,int,int)),
+ this,SLOT(UpdateSliceRange(int,int,int,int,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)),
+ this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)),
+ this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)));
+ connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)),
+ this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)));
+ connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
+ InitSlicers();
+ numberofsuccesulreads++;
+ }
+ }
+ }
+ if (numberofsuccesulreads) {
+ NOViewWidget->show();
+ NEViewWidget->show();
+ SOViewWidget->show();
+ SEViewWidget->show();
+ UpdateTree();
+ InitDisplay();
+ ShowLastImage();
+
+ // Try to guess default WindowLevel
+ double range[2];
+ mSlicerManagers.back()->GetImage()->GetFirstVTKImageData()->GetScalarRange(range);
+ if ((range[0] == 0) && (range[1] == 1)) {
+ presetComboBox->setCurrentIndex(5);// binary
+ } else {
+ // TODO
}
+ }
+ QApplication::restoreOverrideCursor();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::ShowDocumentation() {
- documentation->show();
-}
-//====================================================================
-void vvMainWindow::ShowHelpDialog() {
- help_dialog->show();
-}
-//====================================================================
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateTree()
+{
+ DataTree->resizeColumnToContents(COLUMN_TREE);
+ DataTree->resizeColumnToContents(COLUMN_UL_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_UR_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_DL_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_DR_VIEW);
+ DataTree->resizeColumnToContents(COLUMN_IMAGE_NAME);
+ DataTree->resizeColumnToContents(COLUMN_CLOSE_IMAGE);
+ DataTree->resizeColumnToContents(COLUMN_RELOAD_IMAGE);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::CurrentImageChanged(std::string id)
+{
+ if (id == mCurrentSelectedImageId) return; // Do nothing
+ int selected = 0;
+ for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString().toStdString() == id) {
+ selected = i;
+ } else {
+ DataTree->topLevelItem(i)->setSelected(0);
+ }
+ for (int child = 0; child < DataTree->topLevelItem(i)->childCount(); child++)
+ DataTree->topLevelItem(i)->child(child)->setSelected(0);
+
+ }
+ DataTree->topLevelItem(selected)->setSelected(1);
+ mCurrentSelectedImageId = id;
+ emit SelectedImageHasChanged(mSlicerManagers[selected]);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::CurrentPickedImageChanged(std::string id)
+{
+ if (id == mCurrentPickedImageId) return; // Do nothing
+ int selected = 0;
+ for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString().toStdString() == id) {
+ selected = i;
+ } else {
+ DataTree->topLevelItem(i)->setSelected(0);
+ }
+ for (int child = 0; child < DataTree->topLevelItem(i)->childCount(); child++)
+ DataTree->topLevelItem(i)->child(child)->setSelected(0);
+
+ }
+ DataTree->topLevelItem(selected)->setSelected(1);
+ mCurrentPickedImageId = id;
+ mCurrentPickedImageIndex = selected;
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::ImageInfoChanged()
+{
+ contextActions[6]->setEnabled(1);
+ contextActions[5]->setEnabled(1);
+ actionSave_As->setEnabled(1);
+ actionAdd_VF_to_current_Image->setEnabled(1);
+ actionAdd_fusion_image->setEnabled(1);
+ actionNorth_East_Window->setEnabled(1);
+ actionNorth_West_Window->setEnabled(1);
+ actionSouth_East_Window->setEnabled(1);
+ actionSouth_West_Window->setEnabled(1);
+ inverseButton->setEnabled(1);
+
+ goToCursorPushButton->setEnabled(1);
+
+ if (DataTree->selectedItems().size()) {
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
-//====================================================================
-void vvMainWindow::ChangeViewMode() {
- QListIterator<int> it0(splitter_3->sizes());
- QListIterator<int> it1(splitter_3->sizes());
- int max0 = 0;
- int max1 = 1;
- while (it0.hasNext())
- {
- max0 += it0.next();
- }
- while (it1.hasNext())
- {
- max1 += it1.next();
- }
- QList<int> size0;
- QList<int> size1;
- if (viewMode == 1)
- {
- viewMode = 0;
- size0.push_back(max0);
- size0.push_back(0);
- size1.push_back(max1);
- size1.push_back(0);
- splitter_3->setSizes(size0);
- OSplitter->setSizes(size1);
- DataTree->setColumnHidden(2,1);
- DataTree->setColumnHidden(3,1);
- DataTree->setColumnHidden(4,1);
- }
- else
- {
- viewMode = 1;
- size0.push_back(int(max0/2));
- size0.push_back(int(max0/2));
- size1.push_back(int(max1/2));
- size1.push_back(int(max1/2));
- splitter_3->setSizes(size0);
- OSplitter->setSizes(size1);
- DataTree->setColumnHidden(2,0);
- DataTree->setColumnHidden(3,0);
- DataTree->setColumnHidden(4,0);
- }
-}
-//====================================================================
-
-//====================================================================
-QString vvMainWindow::GetSizeInBytes(unsigned long size) {
- QString result = "";// QString::number(size);
- //result += " bytes (";
- if (size > 1000000000)
- {
- size /= 1000000000;
- result += QString::number(size);
- result += "Gb";//)";
- }
- else if (size > 1000000)
- {
- size /= 1000000;
- result += QString::number(size);
- result += "Mb";//)";
- }
- else if (size > 1000)
- {
- size /= 1000;
- result += QString::number(size);
- result += "kb";//)";
- }
- return result;
-}
-//====================================================================
-
-//====================================================================
-QString vvMainWindow::GetVectorDoubleAsString(std::vector<double> vectorDouble) {
- QString result;
- for (unsigned int i= 0; i < vectorDouble.size(); i++)
- {
- if (i != 0)
- result += " ";
- result += QString::number(vectorDouble[i]);
- }
- return result;
-}
-//====================================================================
-
-//====================================================================
-QString vvMainWindow::GetVectorIntAsString(std::vector<int> vectorInt) {
- QString result;
- for (unsigned int i= 0; i < vectorInt.size(); i++)
- {
- if (i != 0)
- result += " ";
- result += QString::number(vectorInt[i]);
- }
- return result;
+ colorMapComboBox->setEnabled(1);
+ for (int i = 0; i < DataTree->topLevelItem(index)->childCount(); i++) {
+ if (DataTree->topLevelItem(index)->child(i)->data(1,Qt::UserRole).toString() == "overlay" ||
+ DataTree->topLevelItem(index)->child(i)->data(1,Qt::UserRole).toString() == "fusion") {
+ colorMapComboBox->setEnabled(0);
+ break;
+ }
+ }
+
+ std::vector<double> origin;
+ std::vector<double> inputSpacing;
+ std::vector<int> inputSize;
+ std::vector<double> sizeMM;
+ vtkSmartPointer<vtkMatrix4x4> transformation;
+ int dimension=0;
+ QString pixelType;
+ QString inputSizeInBytes;
+ QString image = DataTree->selectedItems()[0]->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+
+ if (mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size() > 1 || playMode == 1) {
+ playButton->setEnabled(1);
+ frameRateLabel->setEnabled(1);
+ frameRateSpinBox->setEnabled(1);
+ } else {
+ playButton->setEnabled(0);
+ frameRateLabel->setEnabled(0);
+ frameRateSpinBox->setEnabled(0);
+ }
+
+ //read image header
+ int NPixel = 1;
+
+ vvImage::Pointer imageSelected;
+ if (DataTree->topLevelItem(index) == DataTree->selectedItems()[0]) {
+ imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetImage();
+ dimension = imageSelected->GetNumberOfDimensions();
+ origin.resize(dimension);
+ inputSpacing.resize(dimension);
+ inputSize.resize(dimension);
+ sizeMM.resize(dimension);
+ pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str();
+ for (int i = 0; i < dimension; i++) {
+ origin[i] = imageSelected->GetOrigin()[i];
+ inputSpacing[i] = imageSelected->GetSpacing()[i];
+ inputSize[i] = imageSelected->GetSize()[i];
+ sizeMM[i] = inputSize[i]*inputSpacing[i];
+ NPixel *= inputSize[i];
+ }
+ inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
+ } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") {
+ imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetVF();
+ dimension = imageSelected->GetNumberOfDimensions();
+ origin.resize(dimension);
+ inputSpacing.resize(dimension);
+ inputSize.resize(dimension);
+ sizeMM.resize(dimension);
+ pixelType = mSlicerManagers[index]->GetVF()->GetScalarTypeAsITKString().c_str();
+ for (int i = 0; i < dimension; i++) {
+ origin[i] = imageSelected->GetOrigin()[i];
+ inputSpacing[i] = imageSelected->GetSpacing()[i];
+ inputSize[i] = imageSelected->GetSize()[i];
+ sizeMM[i] = inputSize[i]*inputSpacing[i];
+ NPixel *= inputSize[i];
+ }
+ inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
+ } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "overlay") {
+ imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetOverlay();
+ dimension = imageSelected->GetNumberOfDimensions();
+ origin.resize(dimension);
+ inputSpacing.resize(dimension);
+ inputSize.resize(dimension);
+ sizeMM.resize(dimension);
+ pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str();
+ for (int i = 0; i < dimension; i++) {
+ origin[i] = imageSelected->GetOrigin()[i];
+ inputSpacing[i] = imageSelected->GetSpacing()[i];
+ inputSize[i] = imageSelected->GetSize()[i];
+ sizeMM[i] = inputSize[i]*inputSpacing[i];
+ NPixel *= inputSize[i];
+ }
+ inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
+ } else if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "fusion") {
+ imageSelected = mSlicerManagers[index]->GetSlicer(0)->GetFusion();
+ dimension = imageSelected->GetNumberOfDimensions();
+ origin.resize(dimension);
+ inputSpacing.resize(dimension);
+ inputSize.resize(dimension);
+ sizeMM.resize(dimension);
+ pixelType = mSlicerManagers[index]->GetImage()->GetScalarTypeAsITKString().c_str();
+ for (int i = 0; i < dimension; i++) {
+ origin[i] = imageSelected->GetOrigin()[i];
+ inputSpacing[i] = imageSelected->GetSpacing()[i];
+ inputSize[i] = imageSelected->GetSize()[i];
+ sizeMM[i] = inputSize[i]*inputSpacing[i];
+ NPixel *= inputSize[i];
+ }
+ inputSizeInBytes = GetSizeInBytes(imageSelected->GetActualMemorySize()*1000);
+ }
+
+ QString dim = QString::number(dimension) + " (";
+ dim += pixelType + ")";
+
+ infoPanel->setFileName(image);
+ infoPanel->setDimension(dim);
+ infoPanel->setSizePixel(GetVectorIntAsString(inputSize));
+ infoPanel->setSizeMM(GetVectorDoubleAsString(sizeMM));
+ infoPanel->setOrigin(GetVectorDoubleAsString(origin));
+ infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing));
+ infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")");
+ transformation = imageSelected->GetTransform()->GetMatrix();
+ infoPanel->setTransformation(Get4x4MatrixDoubleAsString(transformation));
+
+ landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(),
+ mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size());
+ landmarksPanel->SetCurrentPath(mInputPathName.toStdString());
+ landmarksPanel->SetCurrentImage(mSlicerManagers[index]->GetFileName().c_str());
+
+ overlayPanel->getCurrentImageName(mSlicerManagers[index]->GetFileName().c_str());
+ for (int i = 0; i < 4; i++) {
+ if (DataTree->selectedItems()[0]->data(i+1,Qt::CheckStateRole).toInt() > 0 || i == 3) {
+ mSlicerManagers[index]->UpdateInfoOnCursorPosition(i);
+ break;
+ }
+ }
+ windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow());
+ levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel());
+ presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset());
+ colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap());
+
+ infoPanel->setFileName(image);
+ infoPanel->setDimension(dim);
+ infoPanel->setSizePixel(GetVectorIntAsString(inputSize));
+ infoPanel->setSizeMM(GetVectorDoubleAsString(sizeMM));
+ infoPanel->setOrigin(GetVectorDoubleAsString(origin));
+ infoPanel->setSpacing(GetVectorDoubleAsString(inputSpacing));
+ infoPanel->setNPixel(QString::number(NPixel)+" ("+inputSizeInBytes+")");
+
+ landmarksPanel->SetCurrentLandmarks(mSlicerManagers[index]->GetLandmarks(),
+ mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetVTKImages().size());
+ landmarksPanel->SetCurrentPath(mInputPathName.toStdString());
+ landmarksPanel->SetCurrentImage(mSlicerManagers[index]->GetFileName().c_str());
+
+ overlayPanel->getCurrentImageName(mSlicerManagers[index]->GetFileName().c_str());
+ for (int i = 0; i < 4; i++) {
+ if (DataTree->selectedItems()[0]->data(i+1,Qt::CheckStateRole).toInt() > 0 || i == 3) {
+ mSlicerManagers[index]->UpdateInfoOnCursorPosition(i);
+ break;
+ }
+ }
+ windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow());
+ levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel());
+ presetComboBox->setCurrentIndex(mSlicerManagers[index]->GetPreset());
+ colorMapComboBox->setCurrentIndex(mSlicerManagers[index]->GetColorMap());
+
+ if (mSlicerManagers[index]->GetSlicer(0)->GetVF()) {
+ overlayPanel->getVFName(mSlicerManagers[index]->GetVFName().c_str());
+ overlayPanel->getVFProperty(mSlicerManagers[index]->GetSlicer(0)->GetVFSubSampling(),
+ mSlicerManagers[index]->GetSlicer(0)->GetVFScale(),
+ mSlicerManagers[index]->GetSlicer(0)->GetVFLog());
+ } else {
+ overlayPanel->getVFName(mSlicerManagers[index]->GetVFName().c_str());
+ overlayPanel->getVFProperty(-1,-1,-1);
+ }
+ if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) {
+ overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str());
+ overlayPanel->getOverlayProperty(mSlicerManagers[index]->GetOverlayColor());
+ } else {
+ overlayPanel->getOverlayName(mSlicerManagers[index]->GetOverlayName().c_str());
+ overlayPanel->getOverlayProperty(-1);
+ }
+ if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) {
+ overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
+ overlayPanel->getFusionProperty(mSlicerManagers[index]->GetFusionOpacity(),
+ mSlicerManagers[index]->GetFusionColorMap(),
+ mSlicerManagers[index]->GetFusionWindow(),
+ mSlicerManagers[index]->GetFusionLevel());
+ } else {
+ overlayPanel->getFusionName(mSlicerManagers[index]->GetFusionName().c_str());
+ overlayPanel->getFusionProperty(-1, -1,-1,-1);
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::ShowDocumentation()
+{
+ documentation->show();
}
-//====================================================================
-
-//====================================================================
-int vvMainWindow::GetSlicerIndexFromItem(QTreeWidgetItem* item) {
- QString id = item->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
- for (int i = 0; i < DataTree->topLevelItemCount(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString() == id)
- return i;
- }
- return -1;
+//------------------------------------------------------------------------------
+void vvMainWindow::ShowHelpDialog()
+{
+ help_dialog->show();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::DisplayChanged(QTreeWidgetItem *clicked_item, int column) {
- int index = GetSlicerIndexFromItem(clicked_item);
- if ( column >= COLUMN_CLOSE_IMAGE or column <= 0)
- return;
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- QTreeWidgetItem* current_row=DataTree->topLevelItem(i);
- if (DataTree->topLevelItem(index) == current_row)
- {
- vvSlicer* clicked_slicer=mSlicerManagers[i]->GetSlicer(column-1);
- if (current_row == clicked_item)
- {
- //If we just activated a slicer
- if (current_row->data(column,Qt::CheckStateRole).toInt() > 0)
- {
- mSlicerManagers[i]->UpdateSlicer(column-1,clicked_item->data(column,Qt::CheckStateRole).toInt());
- mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1);
- DisplaySliders(i,column-1);
- std::map<std::string,int> overlay_counts;
- for (int child = 0; child < current_row->childCount(); child++)
- {
- std::string overlay_type =
- current_row->child(child)->data(1,Qt::UserRole).toString().toStdString();
- overlay_counts[overlay_type]++;
- current_row->child(child)->setData(column,Qt::CheckStateRole,
- current_row->data(column,Qt::CheckStateRole));
- clicked_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,true);
- }
- }
- else //We don't allow simply desactivating a slicer
- {
- clicked_item->setData(column,Qt::CheckStateRole,2);
- return;
- }
- }
- //if we clicked on the vector(or overlay) and not the image
- else
- {
- if (clicked_item->data(column,Qt::CheckStateRole).toInt())
- {
- current_row->setData(column,Qt::CheckStateRole,2);
- mSlicerManagers[i]->UpdateSlicer(column-1,2);
- mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1);
- DisplaySliders(i,column-1);
- }
- int vis = clicked_item->data(column,Qt::CheckStateRole).toInt();
- std::string overlay_type = clicked_item->data(1,Qt::UserRole).toString().toStdString();
- int overlay_index=0;
- for (int child = 0; child < current_row->childCount(); child++)
- {
- if (current_row->child(child)->data(1,Qt::UserRole).toString().toStdString() == overlay_type)
- overlay_index++;
- if (current_row->child(child) == clicked_item) break;
- }
- clicked_slicer->SetActorVisibility(
- clicked_item->data(1,Qt::UserRole).toString().toStdString(), overlay_index-1,vis);
- }
- }
- else if (current_row->data(column,Qt::CheckStateRole).toInt() > 0)
- {
- current_row->setData(column,Qt::CheckStateRole,0);
- mSlicerManagers[i]->UpdateSlicer(column-1,0);
- std::map<std::string,int> overlay_counts;
- for (int child = 0; child < current_row->childCount(); child++)
- {
- std::string overlay_type =
- current_row->child(child)->data(1,Qt::UserRole).toString().toStdString();
- overlay_counts[overlay_type]++;
- current_row->child(child)->setData(column,Qt::CheckStateRole,0);
- vvSlicer * current_slicer=mSlicerManagers[i]->GetSlicer(column-1);
- current_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,false);
- }
- }
- //mSlicerManagers[i]->SetColorMap(-1);
- }
- mSlicerManagers[index]->GetSlicer(column-1)->Render();
+//------------------------------------------------------------------------------
+void vvMainWindow::ChangeViewMode()
+{
+ QListIterator<int> it0(splitter_3->sizes());
+ QListIterator<int> it1(splitter_3->sizes());
+ int max0 = 0;
+ int max1 = 1;
+ while (it0.hasNext()) {
+ max0 += it0.next();
+ }
+ while (it1.hasNext()) {
+ max1 += it1.next();
+ }
+ QList<int> size0;
+ QList<int> size1;
+ if (viewMode == 1) {
+ viewMode = 0;
+ size0.push_back(max0);
+ size0.push_back(0);
+ size1.push_back(max1);
+ size1.push_back(0);
+ splitter_3->setSizes(size0);
+ OSplitter->setSizes(size1);
+ DataTree->setColumnHidden(2,1);
+ DataTree->setColumnHidden(3,1);
+ DataTree->setColumnHidden(4,1);
+ } else {
+ viewMode = 1;
+ size0.push_back(int(max0/2));
+ size0.push_back(int(max0/2));
+ size1.push_back(int(max1/2));
+ size1.push_back(int(max1/2));
+ splitter_3->setSizes(size0);
+ OSplitter->setSizes(size1);
+ DataTree->setColumnHidden(2,0);
+ DataTree->setColumnHidden(3,0);
+ DataTree->setColumnHidden(4,0);
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+QString vvMainWindow::GetSizeInBytes(unsigned long size)
+{
+ QString result = "";// QString::number(size);
+ //result += " bytes (";
+ if (size > 1000000000) {
+ size /= 1000000000;
+ result += QString::number(size);
+ result += "Gb";//)";
+ } else if (size > 1000000) {
+ size /= 1000000;
+ result += QString::number(size);
+ result += "Mb";//)";
+ } else if (size > 1000) {
+ size /= 1000;
+ result += QString::number(size);
+ result += "kb";//)";
+ }
+ return result;
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+QString vvMainWindow::Get4x4MatrixDoubleAsString(vtkSmartPointer<vtkMatrix4x4> matrix)
+{
+ std::ostringstream strmatrix;
+
+ for (unsigned int i = 0; i < 4; i++) {
+ for (unsigned int j = 0; j < 4; j++) {
+ strmatrix.flags(ios::showpos);
+ strmatrix.width(10);
+ strmatrix.precision(3);
+ strmatrix.setf(ios::fixed,ios::floatfield);
+ strmatrix.fill(' ');
+ strmatrix << std::left << matrix->GetElement(i, j);
+ //strmatrix.width(10);
+ strmatrix << " ";
+ }
+ strmatrix << std::endl;
+ }
+ QString result = strmatrix.str().c_str();
+ return result;
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+QString vvMainWindow::GetVectorDoubleAsString(std::vector<double> vectorDouble)
+{
+ QString result;
+ for (unsigned int i= 0; i < vectorDouble.size(); i++) {
+ if (i != 0)
+ result += " ";
+ result += QString::number(vectorDouble[i]);
+ }
+ return result;
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+QString vvMainWindow::GetVectorIntAsString(std::vector<int> vectorInt)
+{
+ QString result;
+ for (unsigned int i= 0; i < vectorInt.size(); i++) {
+ if (i != 0)
+ result += " ";
+ result += QString::number(vectorInt[i]);
+ }
+ return result;
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+int vvMainWindow::GetSlicerIndexFromItem(QTreeWidgetItem* item)
+{
+ QString id = item->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
+ for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString() == id)
+ return i;
+ }
+ return -1;
}
-//====================================================================
+//------------------------------------------------------------------------------
-void vvMainWindow::InitSlicers()
+//------------------------------------------------------------------------------
+QTreeWidgetItem* vvMainWindow::GetItemFromSlicerManager(vvSlicerManager* sm)
{
- if (mSlicerManagers.size())
- {
- mSlicerManagers.back()->GenerateDefaultLookupTable();
-
- mSlicerManagers.back()->SetSlicerWindow(0,NOViewWidget->GetRenderWindow());
- mSlicerManagers.back()->SetSlicerWindow(1,NEViewWidget->GetRenderWindow());
- mSlicerManagers.back()->SetSlicerWindow(2,SOViewWidget->GetRenderWindow());
- mSlicerManagers.back()->SetSlicerWindow(3,SEViewWidget->GetRenderWindow());
- }
+ QString id = sm->GetId().c_str();
+ for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString() == id)
+ return DataTree->topLevelItem(i);
+ }
+ return NULL;
}
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::InitDisplay() {
- if (mSlicerManagers.size())
- {
- //BE CAREFUL : this is absolutely necessary to set the interactor style
- //in order to have the same style instanciation for all SlicerManagers in
- // a same window
- for (int j = 0; j < 4; j++)
- {
- vvInteractorStyleNavigator* style = vvInteractorStyleNavigator::New();
- style->SetAutoAdjustCameraClippingRange(1);
- bool AlreadySelected = false;
- for (int i = 0; i < DataTree->topLevelItemCount(); i++)
- {
- mSlicerManagers[i]->SetInteractorStyleNavigator(j,style);
-
- //select the image only if previous are not selected
- if (DataTree->topLevelItem(i)->data(j+1,Qt::CheckStateRole).toInt() > 1)
- {
- mSlicerManagers[i]->UpdateSlicer(j,1);
- AlreadySelected = true;
- }
- else if (i == DataTree->topLevelItemCount()-1 && !AlreadySelected)
- {
- if (DataTree->selectedItems().size() == 0)
- DataTree->topLevelItem(i)->setSelected(1);
- DataTree->topLevelItem(i)->setData(j+1,Qt::CheckStateRole,2);
- mSlicerManagers[i]->UpdateSlicer(j,1);
- DisplaySliders(i,j);
- }
- else
- {
- DataTree->topLevelItem(i)->setData(j+1,Qt::CheckStateRole,0);
- mSlicerManagers[i]->UpdateSlicer(j,0);
- }
- }
- style->Delete();
- }
- }
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::DisplaySliders(int slicer, int window) {
- int range[2];
- mSlicerManagers[slicer]->GetSlicer(window)->GetSliceRange(range);
- int position = mSlicerManagers[slicer]->GetSlicer(window)->GetSlice();
-
- int tRange[2];
- tRange[0] = 0;
- tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax();
- int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetTSlice();
- bool showHorizontal = false;
- bool showVertical = false;
- if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3
- || (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 2
- && mSlicerManagers[slicer]->GetType() != IMAGEWITHTIME
- && mSlicerManagers[slicer]->GetType() != MERGEDWITHTIME))
- showVertical = true;
- if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3
- || mSlicerManagers[slicer]->GetType() == IMAGEWITHTIME
- || mSlicerManagers[slicer]->GetType() == MERGEDWITHTIME)
- showHorizontal = true;
-
- if (showVertical)
- verticalSliders[window]->show();
- else
- verticalSliders[window]->hide();
- verticalSliders[window]->setRange(range[0],range[1]);
- verticalSliders[window]->setValue(position);
+//------------------------------------------------------------------------------
+void vvMainWindow::DisplayChanged(QTreeWidgetItem *clicked_item, int column)
+{
+ int index = GetSlicerIndexFromItem(clicked_item);
+ if ( column >= COLUMN_CLOSE_IMAGE || column <= 0)
+ return;
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ //Trick to avoid redoing twice the job for a key (sr)
+ mSlicerManagers[i]->GetSlicer(column-1)->GetRenderWindow()-> GetInteractor()->SetKeySym("Crap");
+
+ QTreeWidgetItem* current_row=DataTree->topLevelItem(i);
+ if (DataTree->topLevelItem(index) == current_row) {
+ vvSlicer* clicked_slicer=mSlicerManagers[i]->GetSlicer(column-1);
+ if (current_row == clicked_item) {
+ //If we just activated a slicer
+ if (current_row->data(column,Qt::CheckStateRole).toInt() > 0) {
+ mSlicerManagers[i]->UpdateSlicer(column-1,clicked_item->data(column,Qt::CheckStateRole).toInt());
+ mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1);
+ DisplaySliders(i,column-1);
+ std::map<std::string,int> overlay_counts;
+ for (int child = 0; child < current_row->childCount(); child++) {
+ std::string overlay_type =
+ current_row->child(child)->data(1,Qt::UserRole).toString().toStdString();
+ overlay_counts[overlay_type]++;
+ current_row->child(child)->setData(column,Qt::CheckStateRole,
+ current_row->data(column,Qt::CheckStateRole));
+ clicked_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,true);
+ }
+ } else { //We don't allow simply desactivating a slicer
+ clicked_item->setData(column,Qt::CheckStateRole,2);
+ return;
+ }
+ }
+ //if we clicked on the vector(or overlay) and not the image
+ else {
+ if (clicked_item->data(column,Qt::CheckStateRole).toInt()) {
+ current_row->setData(column,Qt::CheckStateRole,2);
+ mSlicerManagers[i]->UpdateSlicer(column-1,2);
+ mSlicerManagers[i]->UpdateInfoOnCursorPosition(column-1);
+ DisplaySliders(i,column-1);
+ }
+ int vis = clicked_item->data(column,Qt::CheckStateRole).toInt();
+ std::string overlay_type = clicked_item->data(1,Qt::UserRole).toString().toStdString();
+ int overlay_index=0;
+ for (int child = 0; child < current_row->childCount(); child++) {
+ if (current_row->child(child)->data(1,Qt::UserRole).toString().toStdString() == overlay_type)
+ overlay_index++;
+ if (current_row->child(child) == clicked_item) break;
+ }
+ clicked_slicer->SetActorVisibility(
+ clicked_item->data(1,Qt::UserRole).toString().toStdString(), overlay_index-1,vis);
+ }
+ } else if (current_row->data(column,Qt::CheckStateRole).toInt() > 0) {
+ current_row->setData(column,Qt::CheckStateRole,0);
+ mSlicerManagers[i]->UpdateSlicer(column-1,0);
+ std::map<std::string,int> overlay_counts;
+ for (int child = 0; child < current_row->childCount(); child++) {
+ std::string overlay_type =
+ current_row->child(child)->data(1,Qt::UserRole).toString().toStdString();
+ overlay_counts[overlay_type]++;
+ current_row->child(child)->setData(column,Qt::CheckStateRole,0);
+ vvSlicer * current_slicer=mSlicerManagers[i]->GetSlicer(column-1);
+ current_slicer->SetActorVisibility(overlay_type,overlay_counts[overlay_type]-1,false);
+ }
+ }
+ //mSlicerManagers[i]->SetColorMap(-1);
+ mSlicerManagers[i]->SetColorMap();
+ }
+ mSlicerManagers[index]->GetSlicer(column-1)->Render();
+}
+//------------------------------------------------------------------------------
- if (showHorizontal)
- horizontalSliders[window]->show();
- else
- horizontalSliders[window]->hide();
- horizontalSliders[window]->setRange(tRange[0],tRange[1]);
- horizontalSliders[window]->setValue(tPosition);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::CloseImage(QTreeWidgetItem* item, int column) {
- int index = GetSlicerIndexFromItem(item);
-
- if (DataTree->topLevelItem(index) != item)
- {
- QString warning = "Do you really want to close the overlay : ";
- warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- QMessageBox msgBox(QMessageBox::Warning, tr("Close Overlay"),
- warning, 0, this);
- msgBox.addButton(tr("Close"), QMessageBox::AcceptRole);
- msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
- if (msgBox.exec() == QMessageBox::AcceptRole)
- {
- std::string overlay_type=item->data(1,Qt::UserRole).toString().toStdString();
- int overlay_index=0;
- for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
- {
- if (DataTree->topLevelItem(index)->\
- child(child)->data(1,Qt::UserRole).toString().toStdString() == overlay_type)
- overlay_index++;
- if (DataTree->topLevelItem(index)->child(child) == item) break;
- }
- mSlicerManagers[index]->RemoveActor(overlay_type, overlay_index-1);
- mSlicerManagers[index]->SetColorMap(0);
- DataTree->topLevelItem(index)->takeChild(DataTree->topLevelItem(index)->indexOfChild(item));
- mSlicerManagers[index]->Render();
- }
- }
- else if (DataTree->topLevelItemCount() <= 1)
- {
- QString warning = "Do you really want to close the image : ";
- warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- warning += "\nThis is the last image, you're about to close vv !!!";
- QMessageBox msgBox(QMessageBox::Warning, tr("Close Image"),
- warning, 0, this);
- msgBox.addButton(tr("Close vv"), QMessageBox::AcceptRole);
- msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
- if (msgBox.exec() == QMessageBox::AcceptRole)
- {
- this->close();
- }
- }
- else
- {
- QString warning = "Do you really want to close the image : ";
- warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- QMessageBox msgBox(QMessageBox::Warning, tr("Close Image"),
- warning, 0, this);
- msgBox.addButton(tr("Close"), QMessageBox::AcceptRole);
- msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
- if (msgBox.exec() == QMessageBox::AcceptRole)
- {
- std::vector<vvSlicerManager*>::iterator Manageriter = mSlicerManagers.begin();
- DataTree->takeTopLevelItem(index);
- for (int i = 0; i < index; i++)
- {
- Manageriter++;
- }
- linkPanel->removeImage(index);
- mSlicerManagers[index]->RemoveActors();
- delete mSlicerManagers[index];
- mSlicerManagers.erase(Manageriter);
- InitDisplay();
- }
- }
-}
-//====================================================================
+void vvMainWindow::InitSlicers()
+{
+ if (mSlicerManagers.size()) {
+ mSlicerManagers.back()->GenerateDefaultLookupTable();
-//====================================================================
-void vvMainWindow::ReloadImage(QTreeWidgetItem* item, int column) {
- int index = GetSlicerIndexFromItem(item);
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- QString role=item->data(1,Qt::UserRole).toString();
- if ( role == "vector")
- mSlicerManagers[index]->ReloadVF();
- else if (role == "overlay")
- mSlicerManagers[index]->ReloadOverlay();
- else if (role == "fusion")
- mSlicerManagers[index]->ReloadFusion();
- else
- mSlicerManagers[index]->Reload();
- QApplication::restoreOverrideCursor();
+ mSlicerManagers.back()->SetSlicerWindow(0,NOViewWidget->GetRenderWindow());
+ mSlicerManagers.back()->SetSlicerWindow(1,NEViewWidget->GetRenderWindow());
+ mSlicerManagers.back()->SetSlicerWindow(2,SOViewWidget->GetRenderWindow());
+ mSlicerManagers.back()->SetSlicerWindow(3,SEViewWidget->GetRenderWindow());
+ }
}
-//====================================================================
-void vvMainWindow::CropImage()
+//------------------------------------------------------------------------------
+void vvMainWindow::InitDisplay()
{
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- vvCropDialog crop(mSlicerManagers,index);
- if(crop.exec())
- AddImage(crop.GetOutput(),"cropped.mhd");
-}
+ if (mSlicerManagers.size()) {
+ //BE CAREFUL : this is absolutely necessary to set the interactor style
+ //in order to have the same style instanciation for all SlicerManagers in
+ // a same window
+ for (int j = 0; j < 4; j++) {
+ vvInteractorStyleNavigator* style = vvInteractorStyleNavigator::New();
+ style->SetAutoAdjustCameraClippingRange(1);
+ bool AlreadySelected = false;
+ for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
+ mSlicerManagers[i]->SetInteractorStyleNavigator(j,style);
+
+ //select the image only if previous are not selected
+ if (DataTree->topLevelItem(i)->data(j+1,Qt::CheckStateRole).toInt() > 1) {
+ mSlicerManagers[i]->UpdateSlicer(j,1);
+ AlreadySelected = true;
+ } else if (i == DataTree->topLevelItemCount()-1 && !AlreadySelected) {
+ if (DataTree->selectedItems().size() == 0)
+ DataTree->topLevelItem(i)->setSelected(1);
+ DataTree->topLevelItem(i)->setData(j+1,Qt::CheckStateRole,2);
+ mSlicerManagers[i]->UpdateSlicer(j,1);
+ DisplaySliders(i,j);
+ } else {
+ DataTree->topLevelItem(i)->setData(j+1,Qt::CheckStateRole,0);
+ mSlicerManagers[i]->UpdateSlicer(j,0);
+ }
+ }
+ style->Delete();
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::DisplaySliders(int slicer, int window)
+{
+ int range[2];
+ mSlicerManagers[slicer]->GetSlicer(window)->GetSliceRange(range);
+ int position = mSlicerManagers[slicer]->GetSlicer(window)->GetSlice();
+
+ int tRange[2];
+ tRange[0] = 0;
+ tRange[1] = mSlicerManagers[slicer]->GetSlicer(window)->GetTMax();
+ int tPosition = mSlicerManagers[slicer]->GetSlicer(window)->GetTSlice();
+ bool showHorizontal = false;
+ bool showVertical = false;
+ if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3
+ || (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 2
+ && mSlicerManagers[slicer]->GetType() != vvImageReader::IMAGEWITHTIME
+ && mSlicerManagers[slicer]->GetType() != vvImageReader::MERGEDWITHTIME))
+ showVertical = true;
+ if (mSlicerManagers[slicer]->GetSlicer(window)->GetImage()->GetNumberOfDimensions() > 3
+ || mSlicerManagers[slicer]->GetType() == vvImageReader::IMAGEWITHTIME
+ || mSlicerManagers[slicer]->GetType() == vvImageReader::MERGEDWITHTIME)
+ showHorizontal = true;
+
+ if (showVertical)
+ verticalSliders[window]->show();
+ else
+ verticalSliders[window]->hide();
+ verticalSliders[window]->setRange(range[0],range[1]);
+ verticalSliders[window]->setValue(position);
+
+ if (showHorizontal)
+ horizontalSliders[window]->show();
+ else
+ horizontalSliders[window]->hide();
+ horizontalSliders[window]->setRange(tRange[0],tRange[1]);
+ horizontalSliders[window]->setValue(tPosition);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::CloseImage(QTreeWidgetItem* item, int column)
+{
+ int index = GetSlicerIndexFromItem(item);
-//====================================================================
-void vvMainWindow::SplitImage() {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- int dim = mSlicerManagers[index]->GetDimension();
- QString warning = "Do you really want to split the ";
- warning += QString::number(dim) + "D image ";
- warning += DataTree->selectedItems()[0]->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString() + " into ";
- warning += QString::number(mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetSize()[dim-1]) + " ";
- warning += QString::number(dim-1) + "D images.";
- QMessageBox msgBox(QMessageBox::Warning, tr("Split Image"),
+ if (DataTree->topLevelItem(index) != item) {
+ QString warning = "Do you really want to close the overlay : ";
+ warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ QMessageBox msgBox(QMessageBox::Warning, tr("Close Overlay"),
warning, 0, this);
- msgBox.addButton(tr("Split"), QMessageBox::AcceptRole);
+ msgBox.addButton(tr("Close"), QMessageBox::AcceptRole);
msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
- if (msgBox.exec() == QMessageBox::AcceptRole)
- {
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- if (dim > 2)
- {
- std::string filename = DataTree->selectedItems()[0]->data(0,Qt::UserRole).toString().toStdString();
- int numberOfSlice = mSlicerManagers[index]->GetSlicer(0)->GetImage()->GetSize()[dim-1];
- std::string path = itksys::SystemTools::GetFilenamePath(
- filename);
- path += "/";
- path += DataTree->selectedItems()[0]->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString().toStdString();
- path += "%03d";
- path += itksys::SystemTools::GetFilenameLastExtension(
- filename).c_str();
-
- typedef itk::NumericSeriesFileNames NameGeneratorType;
- NameGeneratorType::Pointer nameGenerator = NameGeneratorType::New();
- nameGenerator->SetSeriesFormat(path.c_str());
- nameGenerator->SetStartIndex(0);
- nameGenerator->SetEndIndex(numberOfSlice-1);
- nameGenerator->SetIncrementIndex(1);
-
- for (int i = 0; i < numberOfSlice; i++)
- {
- vvSlicerManager* imageManager = new vvSlicerManager(4);
- imageManager->SetExtractedImage(nameGenerator->GetFileNames()[i],
- mSlicerManagers[index]->GetSlicer(0)->GetImage(), i);
- mSlicerManagers.push_back(imageManager);
-
- //create an item in the tree with good settings
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,nameGenerator->GetFileNames()[i].c_str());
- std::string fileI = itksys::SystemTools::GetFilenameWithoutLastExtension(
- nameGenerator->GetFileNames()[i]).c_str();
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileI.c_str());
- for (int j = 1; j <= 4; j++)
- {
- for (int i = 0; i < DataTree->topLevelItemCount(); i++)
- {
- DataTree->topLevelItem(i)->setData(j,Qt::CheckStateRole,0);
- }
- item->setData(j,Qt::CheckStateRole,2);
- }
-
- //Create the buttons for reload and close
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close image"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
-
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload image"));
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- rButton->setEnabled(false);
- connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
-
- DataTree->addTopLevelItem(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
-
- //set the id of the image
- QString id = nameGenerator->GetFileNames()[i].c_str() + QString::number(mSlicerManagers.size()-1);
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
- mSlicerManagers.back()->SetId(id.toStdString());
- linkPanel->addImage(fileI, id.toStdString());
- connect(mSlicerManagers.back(),SIGNAL(currentImageChanged(std::string)),
- this,SLOT(CurrentImageChanged(std::string)));
- connect(mSlicerManagers.back(),SIGNAL(
- UpdatePosition(int, double, double, double, double, double, double, double)),this,
- SLOT(MousePositionChanged(int,double, double, double, double, double, double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateVector(int, double, double, double, double)),
- this, SLOT(VectorChanged(int,double,double,double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateOverlay(int, double, double)),
- this, SLOT(OverlayChanged(int,double,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateFusion(int, double)),
- this, SLOT(FusionChanged(int,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateWindows(int, int, int)),
- this,SLOT(WindowsChanged(int, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(WindowLevelChanged(double, double,int, int)),
- this,SLOT(WindowLevelChanged(double, double, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSlice(int,int)),
- this,SLOT(UpdateSlice(int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateTSlice(int, int)),
- this,SLOT(UpdateTSlice(int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSliceRange(int,int,int,int,int)),
- this,SLOT(UpdateSliceRange(int,int,int,int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)),
- this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int)));
- connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
- UpdateTree();
- qApp->processEvents();
- InitSlicers();
- InitDisplay();
- qApp->processEvents();
- }
- QApplication::restoreOverrideCursor();
- }
- else
- {
- QApplication::restoreOverrideCursor();
- QString error = "Cannot split file (dimensions must be greater than 2) ";
- QMessageBox::information(this,tr("Splitting problem"),error);
- }
+ if (msgBox.exec() == QMessageBox::AcceptRole) {
+ std::string overlay_type=item->data(1,Qt::UserRole).toString().toStdString();
+ int overlay_index=0;
+ for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++) {
+ if (DataTree->topLevelItem(index)->\
+ child(child)->data(1,Qt::UserRole).toString().toStdString() == overlay_type)
+ overlay_index++;
+ if (DataTree->topLevelItem(index)->child(child) == item) break;
+ }
+ mSlicerManagers[index]->RemoveActor(overlay_type, overlay_index-1);
+ mSlicerManagers[index]->SetColorMap(0);
+ DataTree->topLevelItem(index)->takeChild(DataTree->topLevelItem(index)->indexOfChild(item));
+ mSlicerManagers[index]->Render();
+ }
+ } else if (DataTree->topLevelItemCount() <= 1) {
+ QString warning = "Do you really want to close the image : ";
+ warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ warning += "\nThis is the last image, you're about to close vv !!!";
+ QMessageBox msgBox(QMessageBox::Warning, tr("Close Image"),
+ warning, 0, this);
+ msgBox.addButton(tr("Close vv"), QMessageBox::AcceptRole);
+ msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
+ if (msgBox.exec() == QMessageBox::AcceptRole) {
+ this->close();
}
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::MousePositionChanged(int visibility,double x, double y, double z, double X, double Y, double Z , double value) {
- infoPanel->setCurrentInfo(visibility,x,y,z,X,Y,Z,value);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::VectorChanged(int visibility,double x, double y, double z, double value) {
- overlayPanel->getCurrentVectorInfo(visibility,x,y,z,value);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::OverlayChanged(int visibility, double valueOver, double valueRef) {
- overlayPanel->getCurrentOverlayInfo(visibility,valueOver, valueRef);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::FusionChanged(int visibility, double value) {
- overlayPanel->getCurrentFusionInfo(visibility,value);
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::WindowsChanged(int window, int view, int slice) {
- infoPanel->setViews(window, view, slice);
-}
-//====================================================================
+ } else {
+ QString warning = "Do you really want to close the image : ";
+ warning += item->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ QMessageBox msgBox(QMessageBox::Warning, tr("Close Image"),
+ warning, 0, this);
+ msgBox.addButton(tr("Close"), QMessageBox::AcceptRole);
+ msgBox.addButton(tr("Cancel"), QMessageBox::RejectRole);
+ if (msgBox.exec() == QMessageBox::AcceptRole) {
-//====================================================================
-void vvMainWindow::WindowLevelChanged(double window, double level,int preset,int colormap) {
- windowSpinBox->setValue(window);
- levelSpinBox->setValue(level);
- colorMapComboBox->setCurrentIndex(colormap);
- presetComboBox->setCurrentIndex(preset);
-}
-//====================================================================
+ // Tell tools that we close an image
+ emit AnImageIsBeingClosed(mSlicerManagers[index]);
-//====================================================================
-void vvMainWindow::WindowLevelEdited() {
- presetComboBox->setCurrentIndex(6);
- UpdateWindowLevel();
-}
-//====================================================================
+ std::vector<vvSlicerManager*>::iterator Manageriter = mSlicerManagers.begin();
+ DataTree->takeTopLevelItem(index);
+ for (int i = 0; i < index; i++) {
+ Manageriter++;
+ }
+ linkPanel->removeImage(index);
+ mSlicerManagers[index]->RemoveActors();
+ delete mSlicerManagers[index];
+ mSlicerManagers.erase(Manageriter);
-//====================================================================
-void vvMainWindow::UpdateWindowLevel() {
- if (DataTree->selectedItems().size())
- {
- if (presetComboBox->currentIndex() == 7) //For ventilation
- colorMapComboBox->setCurrentIndex(5);
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- mSlicerManagers[index]->SetColorWindow(windowSpinBox->value());
- mSlicerManagers[index]->SetColorLevel(levelSpinBox->value());
- mSlicerManagers[index]->SetPreset(presetComboBox->currentIndex());
- mSlicerManagers[index]->Render();
+ //
+ InitDisplay();
}
+ }
+ ImageInfoChanged();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::UpdateColorMap() {
- if (DataTree->selectedItems().size())
- {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- mSlicerManagers[index]->SetColorMap(colorMapComboBox->currentIndex());
- mSlicerManagers[index]->Render();
- }
-}
-//====================================================================
-void vvMainWindow::SwitchWindowLevel() {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- int window = mSlicerManagers[index]->GetColorWindow();
- presetComboBox->setCurrentIndex(6);
- windowSpinBox->setValue(-window);
- UpdateWindowLevel();
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, double y, double z, int temps) {
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (mSlicerManagers[i]->GetId() == id)
- {
- //mSlicerManagers[i]->SetTSlice(temps);
- mSlicerManagers[i]->GetSlicer(slicer)->SetCurrentPosition(x,y,z,temps);
- mSlicerManagers[i]->UpdateViews(0,slicer);
- break;
- }
- }
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::ShowContextMenu(QPoint point) {
- if (!DataTree->selectedItems().size())
- {
- contextActions[1]->setEnabled(0);
- contextActions[2]->setEnabled(0);
- contextActions[3]->setEnabled(0);
- contextActions[4]->setEnabled(0);
- contextActions[5]->setEnabled(0);
- contextActions[6]->setEnabled(0);
- contextActions[7]->setEnabled(0);
- }
- else
- {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- contextActions[1]->setEnabled(1);
- contextActions[2]->setEnabled(
- DataTree->itemWidget(DataTree->selectedItems()[0],
- COLUMN_RELOAD_IMAGE)->isEnabled());
- contextActions[3]->setEnabled(1);
- contextActions[5]->setEnabled(1);
- contextActions[6]->setEnabled(1);
- contextActions[7]->setEnabled(1);
-
- if (mSlicerManagers[index]->GetDimension() < 3)
- contextActions[4]->setEnabled(0);
- else
- contextActions[4]->setEnabled(1);
- }
- contextMenu.exec(QCursor::pos());
+//------------------------------------------------------------------------------
+void vvMainWindow::ReloadImage(QTreeWidgetItem* item, int column)
+{
+ // int index = GetSlicerIndexFromItem(item);
+ // QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ // if (item->data(1,Qt::UserRole).toString() == "vector")
+ // mSlicerManagers[index]->ReloadVF();
+ // else
+ // mSlicerManagers[index]->Reload();
+
+ // QApplication::restoreOverrideCursor();
+ int index = GetSlicerIndexFromItem(item);
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ QString role=item->data(1,Qt::UserRole).toString();
+ if ( role == "vector")
+ mSlicerManagers[index]->ReloadVF();
+ else if (role == "overlay")
+ mSlicerManagers[index]->ReloadOverlay();
+ else if (role == "fusion")
+ mSlicerManagers[index]->ReloadFusion();
+ else
+ mSlicerManagers[index]->Reload();
+
+ // Update view and info
+ ImageInfoChanged();
+ mSlicerManagers[index]->Render();
+ QApplication::restoreOverrideCursor();
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::MousePositionChanged(int visibility,double x, double y, double z, double X, double Y, double Z , double value)
+{
+ infoPanel->setCurrentInfo(visibility,x,y,z,X,Y,Z,value);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::CloseImage() {
- CloseImage(DataTree->selectedItems()[0],0);
+//------------------------------------------------------------------------------
+void vvMainWindow::VectorChanged(int visibility,double x, double y, double z, double value)
+{
+ overlayPanel->getCurrentVectorInfo(visibility,x,y,z,value);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::ReloadImage() {
- ReloadImage(DataTree->selectedItems()[0],0);
+//------------------------------------------------------------------------------
+void vvMainWindow::OverlayChanged(int visibility, double valueOver, double valueRef)
+{
+ overlayPanel->getCurrentOverlayInfo(visibility,valueOver, valueRef);
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::SelectOverlayImage() {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+//------------------------------------------------------------------------------
- //check if one overlay image is added
- for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
- if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "overlay")
- {
- QString error = "Cannot add more than one compared image\n";
- error += "Please remove first ";
- error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- QMessageBox::information(this,tr("Problem adding compared image !"),error);
- return;
- }
-
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QString file = QFileDialog::getOpenFileName(this,tr("Load Overlay image"),mInputPathName,Extensions);
- if (!file.isEmpty())
- AddOverlayImage(index,file);
+//------------------------------------------------------------------------------
+void vvMainWindow::FusionChanged(int visibility, double value)
+{
+ overlayPanel->getCurrentFusionInfo(visibility,value);
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::AddOverlayImage(int index, QString file) {
- mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
- itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
- file.toStdString().c_str(), itk::ImageIOFactory::ReadMode);
- reader->SetFileName(file.toStdString().c_str());
- reader->ReadImageInformation();
- std::string component = reader->GetComponentTypeAsString(reader->GetComponentType());
- int dimension = reader->GetNumberOfDimensions();
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- vvProgressDialog progress("Opening " + file.toStdString());
- qApp->processEvents();
-
- std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
- if (mSlicerManagers[index]->SetOverlay(file.toStdString(),dimension, component))
- {
- //create an item in the tree with good settings
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,file.toStdString().c_str());
- item->setData(1,Qt::UserRole,tr("overlay"));
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str());
- qApp->processEvents();
+//------------------------------------------------------------------------------
- for (int j = 1; j <= 4; j++)
- {
- item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
- mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("overlay",0,
- DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
- }
-
- //Create the buttons for reload and close
- qApp->processEvents();
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close image"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
+//------------------------------------------------------------------------------
+void vvMainWindow::WindowsChanged(int window, int view, int slice)
+{
+ infoPanel->setViews(window, view, slice);
+}
+//------------------------------------------------------------------------------
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload image"));
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
+//------------------------------------------------------------------------------
+void vvMainWindow::WindowLevelChanged(double window, double level,int preset,int colormap)
+{
+ windowSpinBox->setValue(window);
+ levelSpinBox->setValue(level);
+ colorMapComboBox->setCurrentIndex(colormap);
+ presetComboBox->setCurrentIndex(preset);
+}
+//------------------------------------------------------------------------------
- DataTree->topLevelItem(index)->setExpanded(1);
- DataTree->topLevelItem(index)->addChild(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
+//------------------------------------------------------------------------------
+void vvMainWindow::WindowLevelEdited()
+{
+ presetComboBox->setCurrentIndex(6);
+ UpdateWindowLevel();
+}
+//------------------------------------------------------------------------------
- //set the id of the image
- QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
- UpdateTree();
- qApp->processEvents();
- ImageInfoChanged();
- QApplication::restoreOverrideCursor();
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateWindowLevel()
+{
+ if (DataTree->selectedItems().size()) {
+ if (presetComboBox->currentIndex() == 7) //For ventilation
+ colorMapComboBox->setCurrentIndex(5);
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ mSlicerManagers[index]->SetColorWindow(windowSpinBox->value());
+ mSlicerManagers[index]->SetColorLevel(levelSpinBox->value());
+ mSlicerManagers[index]->SetPreset(presetComboBox->currentIndex());
+ mSlicerManagers[index]->Render();
+ windowSpinBox->setValue(mSlicerManagers[index]->GetColorWindow());
+ levelSpinBox->setValue(mSlicerManagers[index]->GetColorLevel());
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateColorMap()
+{
+ if (DataTree->selectedItems().size()) {
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ mSlicerManagers[index]->SetColorMap(colorMapComboBox->currentIndex());
+ mSlicerManagers[index]->Render();
+ }
+}
+//------------------------------------------------------------------------------
+void vvMainWindow::SwitchWindowLevel()
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ int window = mSlicerManagers[index]->GetColorWindow();
+ presetComboBox->setCurrentIndex(6);
+ windowSpinBox->setValue(-window);
+ UpdateWindowLevel();
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::ApplyWindowLevelToAllImages()
+{
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (mSlicerManagers[i] == NULL)
+ continue;
+ mSlicerManagers[i]->SetColorWindow(windowSpinBox->value());
+ mSlicerManagers[i]->SetColorLevel(levelSpinBox->value());
+ mSlicerManagers[i]->SetPreset(6);
+ mSlicerManagers[i]->Render();
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, double y, double z, int temps)
+{
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (mSlicerManagers[i]->GetId() == id) {
+ //mSlicerManagers[i]->SetTSlice(temps);
+ mSlicerManagers[i]->GetSlicer(slicer)->SetCurrentPosition(x,y,z,temps);
+ mSlicerManagers[i]->UpdateViews(0,slicer);
+ break;
}
- else
- {
- QApplication::restoreOverrideCursor();
- QString error = "Cannot import the new image.\n";
- error += mSlicerManagers[index]->GetLastError().c_str();
- QMessageBox::information(this,tr("Problem reading image !"),error);
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateLinkedNavigation(std::string id, vvSlicerManager * sm, vvSlicer* refSlicer)
+{
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (id == mSlicerManagers[i]->GetId()) {
+ mSlicerManagers[i]->UpdateLinkedNavigation(refSlicer);
}
+ }
}
+//------------------------------------------------------------------------------
-void vvMainWindow::AddFusionImage()
+//------------------------------------------------------------------------------
+void vvMainWindow::ShowContextMenu(QPoint point)
{
+ if (!DataTree->selectedItems().size()) {
+ contextActions[1]->setEnabled(0);
+ contextActions[2]->setEnabled(0);
+ contextActions[3]->setEnabled(0);
+ contextActions[4]->setEnabled(0);
+ contextActions[5]->setEnabled(0);
+ contextActions[6]->setEnabled(0);
+ } else {
int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ contextActions[1]->setEnabled(1);
+ contextActions[2]->setEnabled(
+ DataTree->itemWidget(DataTree->selectedItems()[0],
+ COLUMN_RELOAD_IMAGE)->isEnabled());
+ contextActions[3]->setEnabled(1);
+ contextActions[5]->setEnabled(1);
+ contextActions[6]->setEnabled(1);
- //check if one fusion image is added
- for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
- if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "fusion")
- {
- QString error = "Cannot add more than one fusion image\n";
- error += "Please remove first ";
- error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- QMessageBox::information(this,tr("Problem adding fusion image !"),error);
- return;
- }
+ if (mSlicerManagers[index]->GetDimension() < 3)
+ contextActions[4]->setEnabled(0);
+ else
+ contextActions[4]->setEnabled(1);
+ }
+ contextMenu.exec(QCursor::pos());
+}
+//------------------------------------------------------------------------------
- QString Extensions = "Images ( *.bmp *.png *.jpeg *.jpg *.tif *.mhd *.hdr *.vox)";
- Extensions += ";;All Files (*)";
- QString file = QFileDialog::getOpenFileName(this,tr("Load Fusion image"),mInputPathName,Extensions);
- if (!file.isEmpty())
- {
- mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
- itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
- file.toStdString().c_str(), itk::ImageIOFactory::ReadMode);
- reader->SetFileName(file.toStdString().c_str());
- reader->ReadImageInformation();
- std::string component = reader->GetComponentTypeAsString(reader->GetComponentType());
- if (reader)
- {
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- vvProgressDialog progress("Opening fusion");
- qApp->processEvents();
-
- std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
- if (mSlicerManagers[index]->SetFusion(file.toStdString(),
- reader->GetNumberOfDimensions(), component))
- {
- //create an item in the tree with good settings
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,file.toStdString().c_str());
- item->setData(1,Qt::UserRole,tr("fusion"));
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str());
- qApp->processEvents();
-
- for (int j = 1; j <= 4; j++)
- {
- item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
- mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("fusion",0,
- DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
- }
-
- //Create the buttons for reload and close
- qApp->processEvents();
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close image"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
-
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload image"));
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
-
- DataTree->topLevelItem(index)->setExpanded(1);
- DataTree->topLevelItem(index)->addChild(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
-
- //set the id of the image
- QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
- UpdateTree();
- qApp->processEvents();
- ImageInfoChanged();
- QApplication::restoreOverrideCursor();
- }
- else
- {
- QApplication::restoreOverrideCursor();
- QString error = "Cannot import the new image.\n";
- error += mSlicerManagers[index]->GetLastError().c_str();
- QMessageBox::information(this,tr("Problem reading image !"),error);
- }
- }
- else
- {
- QString error = "Cannot import the new image.\n";
- QMessageBox::information(this,tr("Problem reading image !"),error);
- }
- }
+//------------------------------------------------------------------------------
+void vvMainWindow::CloseImage()
+{
+ CloseImage(DataTree->selectedItems()[0],0);
}
+//------------------------------------------------------------------------------
+//------------------------------------------------------------------------------
+void vvMainWindow::ReloadImage()
+{
+ ReloadImage(DataTree->selectedItems()[0],0);
+}
+//------------------------------------------------------------------------------
-void vvMainWindow::OpenField()
+//------------------------------------------------------------------------------
+void vvMainWindow::SelectOverlayImage()
{
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- //check if a vector field has already been added
- for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
- if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "vector")
- {
- QString error = "Cannot add more than one vector field\n";
- error += "Please remove first ";
- error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
- QMessageBox::information(this,tr("Problem adding vector field!"),error);
- return;
- }
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+
+ //check if one overlay image is added
+ for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
+ if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "overlay") {
+ QString error = "Cannot add more than one compared image\n";
+ error += "Please remove first ";
+ error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ QMessageBox::information(this,tr("Problem adding compared image !"),error);
+ return;
+ }
- QString Extensions = "Images ( *.mhd)";
- Extensions += ";;Images ( *.vf)";
- QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions);
- if (!file.isEmpty())
- AddField(file,index);
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+ QString file = QFileDialog::getOpenFileName(this,tr("Load Overlay image"),mInputPathName,Extensions);
+ if (!file.isEmpty())
+ AddOverlayImage(index,file);
}
+//------------------------------------------------------------------------------
-void vvMainWindow::AddFieldEntry(QString filename,int index,bool from_disk)
+//------------------------------------------------------------------------------
+void vvMainWindow::AddOverlayImage(int index, QString file)
{
+
+ mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
+ itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
+ file.toStdString().c_str(), itk::ImageIOFactory::ReadMode);
+ reader->SetFileName(file.toStdString().c_str());
+ reader->ReadImageInformation();
+ std::string component = reader->GetComponentTypeAsString(reader->GetComponentType());
+ int dimension = reader->GetNumberOfDimensions();
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ vvProgressDialog progress("Opening " + file.toStdString());
+ qApp->processEvents();
+
+ std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
+ if (mSlicerManagers[index]->SetOverlay(file.toStdString(),dimension, component)) {
//create an item in the tree with good settings
QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,filename.toStdString().c_str());
- item->setData(1,Qt::UserRole,tr("vector"));
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename);
+ item->setData(0,Qt::UserRole,file.toStdString().c_str());
+ item->setData(1,Qt::UserRole,tr("overlay"));
+ QFileInfo fileinfo(file); //Do not show the path
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName());
+ item->setToolTip(COLUMN_IMAGE_NAME,fileinfo.absoluteFilePath());
qApp->processEvents();
- for (int j = 1; j <= 4; j++)
- {
- item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
- mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("vector",0,
- DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
+ for (int j = 1; j <= 4; j++) {
+ item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
+ mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("overlay",0,
+ DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
}
//Create the buttons for reload and close
QTreePushButton* cButton = new QTreePushButton;
cButton->setItem(item);
cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setToolTip(tr("close vector field"));
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
+ cButton->setToolTip(tr("close image"));
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
this,SLOT(CloseImage(QTreeWidgetItem*, int)));
QTreePushButton* rButton = new QTreePushButton;
rButton->setItem(item);
rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setToolTip(tr("reload vector field"));
- rButton->setEnabled(from_disk);
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
+ rButton->setToolTip(tr("reload image"));
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
DataTree->topLevelItem(index)->setExpanded(1);
DataTree->topLevelItem(index)->addChild(item);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
//set the id of the image
QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
qApp->processEvents();
ImageInfoChanged();
QApplication::restoreOverrideCursor();
+ } else {
+ QApplication::restoreOverrideCursor();
+ QString error = "Cannot import the new image.\n";
+ error += mSlicerManagers[index]->GetLastError().c_str();
+ QMessageBox::information(this,tr("Problem reading image !"),error);
+ }
}
+//------------------------------------------------------------------------------
-void vvMainWindow::AddField(vvImage::Pointer vf,QString file,int index)
+
+//------------------------------------------------------------------------------
+void vvMainWindow::AddROI(int index, QString file)
{
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- vvSlicerManager* imageManager = mSlicerManagers[index];
- if (imageManager->SetVF(vf,file.toStdString()))
- {
- AddFieldEntry(file,index,false);
+ /*
+ // Get slice manager
+
+ // Load image
+
+ vvImageReader * mReader = new vvImageReader;
+ mReader->SetInputFilename(filename.toStdString());
+ mReader->Update(IMAGE);
+ if (mReader->GetLastError().size() != 0) {
+ std::cerr << "Error while reading " << filename.toStdString() << std::endl;
+ QString error = "Cannot open file \n";
+ error += mReader->GetLastError().c_str();
+ QMessageBox::information(this,tr("Reading problem"),error);
+ delete mReader;
+ return;
+ }
+ vvImage::Pointer roi = mReader->GetOutput();
+
+ // Create roi in new tool
+ vvToolStructureSetManager::AddImage(mCurrentSlicerManager, roi);
+ */
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SelectFusionImage()
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+
+ //check if one fusion image is added
+ for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
+ if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "fusion") {
+ QString error = "Cannot add more than one fusion image\n";
+ error += "Please remove first ";
+ error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ QMessageBox::information(this,tr("Problem adding fusion image !"),error);
+ return;
}
- else
- {
- QString error = "Cannot import the vector field for this image.\n";
- error += imageManager->GetLastError().c_str();
- QMessageBox::information(this,tr("Problem reading VF !"),error);
+
+ QString Extensions = EXTENSIONS;
+ Extensions += ";;All Files (*)";
+ QString file = QFileDialog::getOpenFileName(this,tr("Load Fusion image"),mInputPathName,Extensions);
+ if (!file.isEmpty())
+ AddFusionImage(index,file);
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::AddFusionImage(int index, QString file)
+{
+ mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
+ itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
+ file.toStdString().c_str(), itk::ImageIOFactory::ReadMode);
+ reader->SetFileName(file.toStdString().c_str());
+ reader->ReadImageInformation();
+ std::string component = reader->GetComponentTypeAsString(reader->GetComponentType());
+ if (reader) {
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ vvProgressDialog progress("Opening fusion");
+ qApp->processEvents();
+
+ std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
+ if (mSlicerManagers[index]->SetFusion(file.toStdString(),
+ reader->GetNumberOfDimensions(), component)) {
+ //create an item in the tree with good settings
+ QTreeWidgetItem *item = new QTreeWidgetItem();
+ item->setData(0,Qt::UserRole,file.toStdString().c_str());
+ item->setData(1,Qt::UserRole,tr("fusion"));
+ QFileInfo fileinfo(filename.c_str()); //Do not show the path
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName());
+ item->setToolTip(COLUMN_IMAGE_NAME,fileinfo.absoluteFilePath());
+ qApp->processEvents();
+
+ for (int j = 1; j <= 4; j++) {
+ item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
+ mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("fusion",0,
+ DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
+ }
+
+ //Create the buttons for reload and close
+ qApp->processEvents();
+ QTreePushButton* cButton = new QTreePushButton;
+ cButton->setItem(item);
+ cButton->setColumn(COLUMN_CLOSE_IMAGE);
+ cButton->setToolTip(tr("close image"));
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
+ connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(CloseImage(QTreeWidgetItem*, int)));
+
+ QTreePushButton* rButton = new QTreePushButton;
+ rButton->setItem(item);
+ rButton->setColumn(COLUMN_RELOAD_IMAGE);
+ rButton->setToolTip(tr("reload image"));
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
+ connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
+
+ DataTree->topLevelItem(index)->setExpanded(1);
+ DataTree->topLevelItem(index)->addChild(item);
+ DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
+
+ //set the id of the image
+ QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
+ item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
+ UpdateTree();
+ qApp->processEvents();
+ ImageInfoChanged();
+ QApplication::restoreOverrideCursor();
+ } else {
+ QApplication::restoreOverrideCursor();
+ QString error = "Cannot import the new image.\n";
+ error += mSlicerManagers[index]->GetLastError().c_str();
+ QMessageBox::information(this,tr("Problem reading image !"),error);
+ }
+ } else {
+ QString error = "Cannot import the new image.\n";
+ QMessageBox::information(this,tr("Problem reading image !"),error);
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::OpenField()
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ //check if a vector field has already been added
+ for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
+ if (DataTree->topLevelItem(index)->child(child)->data(1,Qt::UserRole).toString() == "vector") {
+ QString error = "Cannot add more than one vector field\n";
+ error += "Please remove first ";
+ error += DataTree->topLevelItem(index)->child(child)->data(COLUMN_IMAGE_NAME,Qt::DisplayRole).toString();
+ QMessageBox::information(this,tr("Problem adding vector field!"),error);
+ return;
}
- QApplication::restoreOverrideCursor();
+
+ QString Extensions = "Images ( *.mhd)";
+ Extensions += ";;Images ( *.vf)";
+ QString file = QFileDialog::getOpenFileName(this,tr("Load deformation field"),mInputPathName,Extensions);
+ if (!file.isEmpty())
+ AddField(file,index);
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::AddFieldEntry(QString filename,int index,bool from_disk)
+{
+ //create an item in the tree with good settings
+ QTreeWidgetItem *item = new QTreeWidgetItem();
+ item->setData(0,Qt::UserRole,filename.toStdString().c_str());
+ item->setData(1,Qt::UserRole,tr("vector"));
+ QFileInfo fileinfo(filename); //Do not show the path
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,fileinfo.fileName());
+ item->setToolTip(COLUMN_IMAGE_NAME,fileinfo.absoluteFilePath());
+ qApp->processEvents();
+
+ for (int j = 1; j <= 4; j++) {
+ item->setData(j,Qt::CheckStateRole,DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole));
+ mSlicerManagers[index]->GetSlicer(j-1)->SetActorVisibility("vector",0,
+ DataTree->topLevelItem(index)->data(j,Qt::CheckStateRole).toInt());
+ }
+
+ //Create the buttons for reload and close
+ qApp->processEvents();
+ QTreePushButton* cButton = new QTreePushButton;
+ cButton->setItem(item);
+ cButton->setColumn(COLUMN_CLOSE_IMAGE);
+ cButton->setToolTip(tr("close vector field"));
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
+ connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(CloseImage(QTreeWidgetItem*, int)));
+
+ QTreePushButton* rButton = new QTreePushButton;
+ rButton->setItem(item);
+ rButton->setColumn(COLUMN_RELOAD_IMAGE);
+ rButton->setToolTip(tr("reload vector field"));
+ rButton->setEnabled(from_disk);
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
+ connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
+
+ DataTree->topLevelItem(index)->setExpanded(1);
+ DataTree->topLevelItem(index)->addChild(item);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
+ DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+
+ //set the id of the image
+ QString id = DataTree->topLevelItem(index)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
+ item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
+ UpdateTree();
+ qApp->processEvents();
+ ImageInfoChanged();
+ QApplication::restoreOverrideCursor();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::AddField(vvImage::Pointer vf,QString file,int index)
+{
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ vvSlicerManager* imageManager = mSlicerManagers[index];
+ if (imageManager->SetVF(vf,file.toStdString())) {
+ AddFieldEntry(file,index,false);
+ } else {
+ QString error = "Cannot import the vector field for this image.\n";
+ error += imageManager->GetLastError().c_str();
+ QMessageBox::information(this,tr("Problem reading VF !"),error);
+ }
+ QApplication::restoreOverrideCursor();
}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
void vvMainWindow::AddField(QString file,int index)
{
- if (QFile::exists(file))
- {
- mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
+ if (QFile::exists(file)) {
+ mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
- //init the progress events
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- vvProgressDialog progress("Opening " + file.toStdString());
- qApp->processEvents();
+ //init the progress events
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ vvProgressDialog progress("Opening " + file.toStdString());
+ qApp->processEvents();
- //read the vector and put it in the current mSlicerManager
- vvSlicerManager* imageManager = mSlicerManagers[index];
- qApp->processEvents();
+ //read the vector and put it in the current mSlicerManager
+ vvSlicerManager* imageManager = mSlicerManagers[index];
+ qApp->processEvents();
- std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
- if (imageManager->SetVF(file.toStdString()))
- {
- imageManager->Render();
- AddFieldEntry(file,index,true);
- }
- else
- {
- QApplication::restoreOverrideCursor();
- QString error = "Cannot import the vector field for this image.\n";
- error += imageManager->GetLastError().c_str();
- QMessageBox::information(this,tr("Problem reading VF !"),error);
- }
+ std::string filename = itksys::SystemTools::GetFilenameWithoutExtension(file.toStdString()).c_str();
+ if (imageManager->SetVF(file.toStdString())) {
+ imageManager->Render();
+ AddFieldEntry(file,index,true);
+ } else {
+ QApplication::restoreOverrideCursor();
+ QString error = "Cannot import the vector field for this image.\n";
+ error += imageManager->GetLastError().c_str();
+ QMessageBox::information(this,tr("Problem reading VF !"),error);
}
- else
- QMessageBox::information(this,tr("Problem reading VF !"),"File doesn't exist!");
+ } else
+ QMessageBox::information(this,tr("Problem reading VF !"),"File doesn't exist!");
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SetVFProperty(int subsampling, int scale, int log) {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- if (mSlicerManagers[index]->GetSlicer(0)->GetVF())
- {
- for (int i = 0; i < 4; i++)
- {
- mSlicerManagers[index]->GetSlicer(i)->SetVFSubSampling(subsampling);
- mSlicerManagers[index]->GetSlicer(i)->SetVFScale(scale);
- if (log > 0)
- mSlicerManagers[index]->GetSlicer(i)->SetVFLog(1);
- else
- mSlicerManagers[index]->GetSlicer(i)->SetVFLog(0);
- }
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width, double r, double g, double b)
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ if (mSlicerManagers[index]->GetSlicer(0)->GetVF()) {
+ for (int i = 0; i < 4; i++) {
+ mSlicerManagers[index]->GetSlicer(i)->SetVFSubSampling(subsampling);
+ mSlicerManagers[index]->GetSlicer(i)->SetVFScale(scale);
+ mSlicerManagers[index]->GetSlicer(i)->SetVFWidth(width);
+ mSlicerManagers[index]->GetSlicer(i)->SetVFColor(r,g,b);
+ if (log > 0)
+ mSlicerManagers[index]->GetSlicer(i)->SetVFLog(1);
+ else
+ mSlicerManagers[index]->GetSlicer(i)->SetVFLog(0);
}
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SetOverlayProperty(int color) {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay())
- {
- mSlicerManagers[index]->SetOverlayColor(color);
- mSlicerManagers[index]->SetColorMap(0);
- mSlicerManagers[index]->Render();
- }
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SetOverlayProperty(int color)
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) {
+ mSlicerManagers[index]->SetOverlayColor(color);
+ mSlicerManagers[index]->SetColorMap(0);
+ mSlicerManagers[index]->Render();
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SetFusionProperty(int opacity, int colormap,double window, double level) {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- if (mSlicerManagers[index]->GetSlicer(0)->GetFusion())
- {
- mSlicerManagers[index]->SetFusionOpacity(opacity);
- mSlicerManagers[index]->SetFusionColorMap(colormap);
- mSlicerManagers[index]->SetFusionWindow(window);
- mSlicerManagers[index]->SetFusionLevel(level);
- mSlicerManagers[index]->SetColorMap(0);
- mSlicerManagers[index]->Render();
+//------------------------------------------------------------------------------
+void vvMainWindow::SetFusionProperty(int opacity, int colormap,double window, double level)
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) {
+ mSlicerManagers[index]->SetFusionOpacity(opacity);
+ mSlicerManagers[index]->SetFusionColorMap(colormap);
+ mSlicerManagers[index]->SetFusionWindow(window);
+ mSlicerManagers[index]->SetFusionLevel(level);
+ mSlicerManagers[index]->SetColorMap(0);
+ mSlicerManagers[index]->Render();
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveAs()
+{
+ if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") {
+ QMessageBox::warning(this,tr("Unsupported type"),tr("Sorry, saving a vector field is unsupported for the moment"));
+ return;
+ }
+
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ int dimension = mSlicerManagers[index]->GetDimension();
+ QStringList OutputListeFormat;
+ OutputListeFormat.clear();
+ if (dimension == 1) {
+ OutputListeFormat.push_back(".mhd");
+ }
+ if (dimension == 2) {
+ OutputListeFormat.push_back(".bmp");
+ OutputListeFormat.push_back(".png");
+ OutputListeFormat.push_back(".jpeg");
+ OutputListeFormat.push_back(".tif");
+ OutputListeFormat.push_back(".mhd");
+ OutputListeFormat.push_back(".hdr");
+ OutputListeFormat.push_back(".vox");
+ } else if (dimension == 3) {
+ OutputListeFormat.push_back(".mhd");
+ OutputListeFormat.push_back(".hdr");
+ OutputListeFormat.push_back(".vox");
+ } else if (dimension == 4) {
+ OutputListeFormat.push_back(".mhd");
+ }
+ QString Extensions = "AllFiles(*.*)";
+ for (int i = 0; i < OutputListeFormat.count(); i++) {
+ Extensions += ";;Images ( *";
+ Extensions += OutputListeFormat[i];
+ Extensions += ")";
+ }
+ QString fileName = QFileDialog::getSaveFileName(this,
+ tr("Save As"),
+ mSlicerManagers[index]->GetFileName().c_str(),
+ Extensions);
+ if (!fileName.isEmpty()) {
+ std::string fileformat = itksys::SystemTools::GetFilenameLastExtension(fileName.toStdString());
+ if (OutputListeFormat.contains(
+ fileformat.c_str())) {
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
+ std::string action = "Saving";
+ vvProgressDialog progress("Saving "+fileName.toStdString());
+ qApp->processEvents();
+ vvImageWriter::Pointer writer = vvImageWriter::New();
+ writer->SetOutputFileName(fileName.toStdString());
+ writer->SetInput(mSlicerManagers[index]->GetImage());
+ writer->Update();
+ QApplication::restoreOverrideCursor();
+ if (writer->GetLastError().size()) {
+ QString error = "Saving did not succeed\n";
+ error += writer->GetLastError().c_str();
+ QMessageBox::information(this,tr("Saving Problem"),error);
+ SaveAs();
+ }
+ } else {
+ QString error = fileformat.c_str();
+ if (error.isEmpty())
+ error += "no file format specified !";
+ else
+ error += " format unknown !!!\n";
+ QMessageBox::information(this,tr("Saving Problem"),error);
+ SaveAs();
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::AddLink(QString image1,QString image2)
+{
+ unsigned int sm1 = 0;
+ unsigned int sm2 = 0;
+
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (image1.toStdString() == mSlicerManagers[i]->GetId()) {
+ mSlicerManagers[i]->AddLink(image2.toStdString());
+ sm1 = i;
+ }
+ if (image2.toStdString() == mSlicerManagers[i]->GetId()) {
+ mSlicerManagers[i]->AddLink(image1.toStdString());
+ sm2 = i;
}
+ }
+
+ if (linkPanel->isLinkAll()) {
+ emit UpdateLinkedNavigation(mSlicerManagers[sm1]->GetId(), mSlicerManagers[mCurrentPickedImageIndex], mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(0));
+ emit UpdateLinkedNavigation(mSlicerManagers[sm2]->GetId(), mSlicerManagers[mCurrentPickedImageIndex], mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(0));
+ }
+ else {
+ emit UpdateLinkedNavigation(mSlicerManagers[sm2]->GetId(), mSlicerManagers[sm1], mSlicerManagers[sm1]->GetSlicer(0));
+ }
}
-//====================================================================
-//====================================================================
-void vvMainWindow::SaveAs() {
- if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector")
- {
- QMessageBox::warning(this,tr("Unsupported type"),tr("Sorry, saving a vector field is unsupported for the moment"));
- return;
- }
+//------------------------------------------------------------------------------
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- int dimension = mSlicerManagers[index]->GetDimension();
- QStringList OutputListeFormat;
- OutputListeFormat.clear();
- if (dimension == 1)
- {
- OutputListeFormat.push_back(".mhd");
- }
- if (dimension == 2)
- {
- OutputListeFormat.push_back(".bmp");
- OutputListeFormat.push_back(".png");
- OutputListeFormat.push_back(".jpeg");
- OutputListeFormat.push_back(".tif");
- OutputListeFormat.push_back(".mhd");
- OutputListeFormat.push_back(".hdr");
- OutputListeFormat.push_back(".vox");
- }
- else if (dimension == 3)
- {
- OutputListeFormat.push_back(".mhd");
- OutputListeFormat.push_back(".hdr");
- OutputListeFormat.push_back(".vox");
- }
- else if (dimension == 4)
- {
- OutputListeFormat.push_back(".mhd");
- }
- QString Extensions = "AllFiles(*.*)";
- for (int i = 0; i < OutputListeFormat.count(); i++)
- {
- Extensions += ";;Images ( *";
- Extensions += OutputListeFormat[i];
- Extensions += ")";
+
+//------------------------------------------------------------------------------
+void vvMainWindow::RemoveLink(QString image1,QString image2)
+{
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (image1.toStdString() == mSlicerManagers[i]->GetId()) {
+ mSlicerManagers[i]->RemoveLink(image2.toStdString());
}
- QString fileName = QFileDialog::getSaveFileName(this,
- tr("Save As"),
- mSlicerManagers[index]->GetFileName().c_str(),
- Extensions);
- if (!fileName.isEmpty())
- {
- std::string fileformat = itksys::SystemTools::GetFilenameLastExtension(fileName.toStdString());
- if (OutputListeFormat.contains(
- fileformat.c_str()))
- {
- QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
- std::string action = "Saving";
- vvProgressDialog progress("Saving "+fileName.toStdString());
- qApp->processEvents();
- vvImageWriter *writer = new vvImageWriter;
- writer->SetOutputFileName(fileName.toStdString());
- writer->SetInput(mSlicerManagers[index]->GetImage());
- writer->Update();
- QApplication::restoreOverrideCursor();
- if (writer->GetLastError().size())
- {
- QString error = "Saving did not succeed\n";
- error += writer->GetLastError().c_str();
- QMessageBox::information(this,tr("Saving Problem"),error);
- SaveAs();
- }
- }
- else
- {
- QString error = fileformat.c_str();
- if (error.isEmpty())
- error += "no file format specified !";
- else
- error += " format unknown !!!\n";
- QMessageBox::information(this,tr("Saving Problem"),error);
- SaveAs();
- }
+ if (image2.toStdString() == mSlicerManagers[i]->GetId()) {
+ mSlicerManagers[i]->RemoveLink(image1.toStdString());
}
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::AddLink(QString image1,QString image2) {
- for (unsigned int i = 0; i < mSlicerManagers.size();i++)
- {
- if (image1.toStdString() == mSlicerManagers[i]->GetId())
- {
- mSlicerManagers[i]->AddLink(image2.toStdString());
- }
- if (image2.toStdString() == mSlicerManagers[i]->GetId())
- {
- mSlicerManagers[i]->AddLink(image1.toStdString());
- }
- }
-}
-//====================================================================
+//------------------------------------------------------------------------------
+void vvMainWindow::ChangeImageWithIndexOffset(vvSlicerManager *sm, int slicer, int offset)
+{
+ int index = 0;
+ while(sm != mSlicerManagers[index])
+ index++;
+ index = (index+offset) % mSlicerManagers.size();
-//====================================================================
-void vvMainWindow::RemoveLink(QString image1,QString image2) {
- for (unsigned int i = 0; i < mSlicerManagers.size();i++)
- {
- if (image1.toStdString() == mSlicerManagers[i]->GetId())
- {
- mSlicerManagers[i]->RemoveLink(image2.toStdString());
- }
- if (image2.toStdString() == mSlicerManagers[i]->GetId())
- {
- mSlicerManagers[i]->RemoveLink(image1.toStdString());
- }
- }
+ QTreeWidgetItem* item = GetItemFromSlicerManager(mSlicerManagers[index]);
+ //CurrentImageChanged(mSlicerManagers[index]->GetId()); //select new image
+ item->setData(slicer+1,Qt::CheckStateRole,2); //change checkbox
+ DisplayChanged(item,slicer+1);
}
-//====================================================================
+//------------------------------------------------------------------------------
void vvMainWindow::HorizontalSliderMoved(int value,int column, int slicer_index)
{
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (DataTree->topLevelItem(i)->data(column,Qt::CheckStateRole).toInt() > 1)
- {
- for (int j = 0; j < 4; j++)
- {
- mSlicerManagers[i]->SetTSliceInSlicer(value,j);
- //if (mSlicerManagers[i]->GetSlicer(j)->GetImageActor()->GetVisibility())
- //UpdateTSlice(j,value);
- }
- mSlicerManagers[i]->GetSlicer(slicer_index)->Render();
- break;
- }
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (DataTree->topLevelItem(i)->data(column,Qt::CheckStateRole).toInt() > 1) {
+ for (int j = 0; j < 4; j++) {
+ mSlicerManagers[i]->SetTSliceInSlicer(value,j);
+ //if (mSlicerManagers[i]->GetSlicer(j)->GetImageActor()->GetVisibility())
+ //UpdateTSlice(j,value);
+ }
+ mSlicerManagers[i]->GetSlicer(slicer_index)->Render();
+ break;
}
+ }
}
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::NOHorizontalSliderMoved() {
- HorizontalSliderMoved(NOHorizontalSlider->value(),COLUMN_UL_VIEW,0);
-}
-//====================================================================
-//====================================================================
-void vvMainWindow::NEHorizontalSliderMoved() {
- HorizontalSliderMoved(NEHorizontalSlider->value(),COLUMN_UR_VIEW,1);
+//------------------------------------------------------------------------------
+void vvMainWindow::NOHorizontalSliderMoved()
+{
+ // if (mCurrentTime == NOHorizontalSlider->value()) return;
+ HorizontalSliderMoved(NOHorizontalSlider->value(),COLUMN_UL_VIEW,0);
+// mCurrentTime = NOHorizontalSlider->value();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SOHorizontalSliderMoved() {
- HorizontalSliderMoved(SOHorizontalSlider->value(),COLUMN_DL_VIEW,2);
-}
-//====================================================================
-//====================================================================
-void vvMainWindow::SEHorizontalSliderMoved() {
- HorizontalSliderMoved(SEHorizontalSlider->value(),COLUMN_DR_VIEW,3);
+//------------------------------------------------------------------------------
+void vvMainWindow::NEHorizontalSliderMoved()
+{
+ // if (mCurrentTime == NEHorizontalSlider->value()) return;
+ HorizontalSliderMoved(NEHorizontalSlider->value(),COLUMN_UR_VIEW,1);
+// mCurrentTime = NEHorizontalSlider->value();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::NOVerticalSliderChanged() {
- int value = NOVerticalSlider->value();
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_UL_VIEW,Qt::CheckStateRole).toInt() > 1)
- {
- mSlicerManagers[i]->GetSlicer(0)->SetSlice(value);
- break;
- }
- }
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::NEVerticalSliderChanged() {
- int value = NEVerticalSlider->value();
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_UR_VIEW,Qt::CheckStateRole).toInt() > 1)
- {
- mSlicerManagers[i]->GetSlicer(1)->SetSlice(value);
- break;
- }
- }
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SOHorizontalSliderMoved()
+{
+ // if (mCurrentTime == SOHorizontalSlider->value()) return;
+ HorizontalSliderMoved(SOHorizontalSlider->value(),COLUMN_DL_VIEW,2);
+ // mCurrentTime = SOHorizontalSlider->value();
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::SOVerticalSliderChanged() {
- int value = SOVerticalSlider->value();
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_DL_VIEW,Qt::CheckStateRole).toInt() > 1)
- {
- mSlicerManagers[i]->GetSlicer(2)->SetSlice(value);
- break;
- }
- }
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SEHorizontalSliderMoved()
+{
+ // if (mCurrentTime == SEHorizontalSlider->value()) return;
+ HorizontalSliderMoved(SEHorizontalSlider->value(),COLUMN_DR_VIEW,3);
+ // mCurrentTime = SEHorizontalSlider->value();
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::SEVerticalSliderChanged() {
- int value = SEVerticalSlider->value();
- for (unsigned int i = 0; i < mSlicerManagers.size(); i++)
- {
- if (DataTree->topLevelItem(i)->data(COLUMN_DR_VIEW,Qt::CheckStateRole).toInt() > 1)
- {
- mSlicerManagers[i]->GetSlicer(3)->SetSlice(value);
- break;
- }
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::NOVerticalSliderChanged()
+{
+ static int value=-1;
+ if (value == NOVerticalSlider->value()) return;
+ else value = NOVerticalSlider->value();
+ // int value = NOVerticalSlider->value();
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_UL_VIEW,Qt::CheckStateRole).toInt() > 1) {
+ if (mSlicerManagers[i]->GetSlicer(0)->GetSlice() != value) {
+ mSlicerManagers[i]->GetSlicer(0)->SetSlice(value);
+ mSlicerManagers[i]->VerticalSliderHasChanged(0, value);
+
+ // If nor Update/Render -> slider not work
+ // only render = ok navigation, but for contour Update needed but slower ?
+
+ mSlicerManagers[i]->UpdateSlice(0); // <-- DS add this. Not too much update ? YES. but needed for ImageContour ...
+ //mSlicerManagers[i]->GetSlicer(0)->Render(); // <-- DS add this, needed for contour, seems ok ? not too slow ?
+ }
+ break;
}
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::UpdateSlice(int slicer, int slice) {
- if (slicer == 0)
- NOVerticalSlider->setValue(slice);
- else if (slicer == 1)
- NEVerticalSlider->setValue(slice);
- else if (slicer == 2)
- SOVerticalSlider->setValue(slice);
- else if (slicer == 3)
- SEVerticalSlider->setValue(slice);
-}
-//====================================================================
-//====================================================================
-void vvMainWindow::UpdateTSlice(int slicer, int slice) {
- switch (slicer)
- {
- case 0:
- NOHorizontalSlider->setValue(slice);
- break;
- case 1:
- NEHorizontalSlider->setValue(slice);
- break;
- case 2:
- SOHorizontalSlider->setValue(slice);
- break;
- case 3:
- SEHorizontalSlider->setValue(slice);
- break;
+//------------------------------------------------------------------------------
+void vvMainWindow::NEVerticalSliderChanged()
+{
+ static int value=-1;
+ if (value == NEVerticalSlider->value()) return;
+ else value = NEVerticalSlider->value();
+ // int value = NEVerticalSlider->value();
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_UR_VIEW,Qt::CheckStateRole).toInt() > 1) {
+ if (mSlicerManagers[i]->GetSlicer(1)->GetSlice() != value) {
+ mSlicerManagers[i]->GetSlicer(1)->SetSlice(value);
+ mSlicerManagers[i]->VerticalSliderHasChanged(1, value);
+ mSlicerManagers[i]->UpdateSlice(1);
+ //mSlicerManagers[i]->GetSlicer(1)->Render(); // <-- DS add this, needed for contour, seems ok ? not too slow ?
+ }
+ break;
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SOVerticalSliderChanged()
+{
+ static int value=-1;
+ if (value == SOVerticalSlider->value()) return;
+ else value = SOVerticalSlider->value();
+ //int value = SOVerticalSlider->value();
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_DL_VIEW,Qt::CheckStateRole).toInt() > 1) {
+ if (mSlicerManagers[i]->GetSlicer(2)->GetSlice() != value) {
+ mSlicerManagers[i]->GetSlicer(2)->SetSlice(value);
+ mSlicerManagers[i]->VerticalSliderHasChanged(2, value);
+ mSlicerManagers[i]->UpdateSlice(2);
+ //mSlicerManagers[i]->GetSlicer(2)->Render(); // <-- DS add this, needed for contour, seems ok ? not too slow ?
+ }
+ // else { DD("avoid SOVerticalSlider slicer update"); }
+ break;
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SEVerticalSliderChanged()
+{
+ static int value=-1;
+ if (value == SEVerticalSlider->value()) return;
+ else value = SEVerticalSlider->value();
+ // int value = SEVerticalSlider->value();
+ for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
+ if (DataTree->topLevelItem(i)->data(COLUMN_DR_VIEW,Qt::CheckStateRole).toInt() > 1) {
+ if (mSlicerManagers[i]->GetSlicer(3)->GetSlice() != value) {
+ mSlicerManagers[i]->GetSlicer(3)->SetSlice(value);
+ mSlicerManagers[i]->VerticalSliderHasChanged(3, value);
+ mSlicerManagers[i]->UpdateSlice(3);
+ //mSlicerManagers[i]->GetSlicer(3)->Render(); // <-- DS add this, needed for contour, seems ok ? not too slow ?
+ }
+ break;
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateSlice(int slicer, int slice)
+{
+ // DD("vvMainWindow::UpdateSlice");
+// DD(slicer);
+// DD(slice);
+ if (slicer == 0) {
+ // if (slice != NOVerticalSlider->value())
+ NOVerticalSlider->setValue(slice);
+ } else {
+ if (slicer == 1)
+ NEVerticalSlider->setValue(slice);
+ else {
+ if (slicer == 2)
+ SOVerticalSlider->setValue(slice);
+ else {
+ if (slicer == 3)
+ SEVerticalSlider->setValue(slice);
+ }
}
+ }
+ // DD("vvMainWindow:UpdateSlice END");
}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax) {
- int position = int((min+max)/2);
- int tPosition = int((tmin+tmax)/2);
- if (slicer == 0)
- {
- NOVerticalSlider->setValue(position);
- NOVerticalSlider->setRange(min,max);
- NOHorizontalSlider->setRange(tmin,tmax);
- NOHorizontalSlider->setValue(tPosition);
- }
- else if (slicer == 1)
- {
- NEVerticalSlider->setValue(position);
- NEVerticalSlider->setRange(min,max);
- NEHorizontalSlider->setRange(tmin,tmax);
- NEHorizontalSlider->setValue(tPosition);
- }
- else if (slicer == 2)
- {
- SOVerticalSlider->setValue(position);
- SOVerticalSlider->setRange(min,max);
- SOHorizontalSlider->setRange(tmin,tmax);
- SOHorizontalSlider->setValue(tPosition);
- }
- else if (slicer == 3)
- {
- SEVerticalSlider->setValue(position);
- SEVerticalSlider->setRange(min,max);
- SEHorizontalSlider->setRange(tmin,tmax);
- SEHorizontalSlider->setValue(tPosition);
- }
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateTSlice(int slicer, int slice)
+{
+ switch (slicer) {
+ case 0:
+ NOHorizontalSlider->setValue(slice);
+ break;
+ case 1:
+ NEHorizontalSlider->setValue(slice);
+ break;
+ case 2:
+ SOHorizontalSlider->setValue(slice);
+ break;
+ case 3:
+ SEHorizontalSlider->setValue(slice);
+ break;
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax)
+{
+ int position = int((min+max)/2);
+ int tPosition = int((tmin+tmax)/2);
+ if (slicer == 0) {
+ NOVerticalSlider->setValue(position);
+ NOVerticalSlider->setRange(min,max);
+ NOHorizontalSlider->setRange(tmin,tmax);
+ NOHorizontalSlider->setValue(tPosition);
+ } else if (slicer == 1) {
+ NEVerticalSlider->setValue(position);
+ NEVerticalSlider->setRange(min,max);
+ NEHorizontalSlider->setRange(tmin,tmax);
+ NEHorizontalSlider->setValue(tPosition);
+ } else if (slicer == 2) {
+ SOVerticalSlider->setValue(position);
+ SOVerticalSlider->setRange(min,max);
+ SOHorizontalSlider->setRange(tmin,tmax);
+ SOHorizontalSlider->setValue(tPosition);
+ } else if (slicer == 3) {
+ SEVerticalSlider->setValue(position);
+ SEVerticalSlider->setRange(min,max);
+ SEHorizontalSlider->setRange(tmin,tmax);
+ SEHorizontalSlider->setValue(tPosition);
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveNOScreenshot()
+{
+ SaveScreenshot(NOViewWidget);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SaveNOScreenshot() {
- vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New();
- w2i->SetInput(NOViewWidget->GetRenderWindow());
- w2i->Update();
- SaveScreenshot(w2i->GetOutput());
- w2i->Delete();
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveNEScreenshot()
+{
+ SaveScreenshot(NEViewWidget);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SaveNEScreenshot() {
- vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New();
- w2i->SetInput(NEViewWidget->GetRenderWindow());
- w2i->Update();
- SaveScreenshot(w2i->GetOutput());
- w2i->Delete();
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveSOScreenshot()
+{
+ SaveScreenshot(SOViewWidget);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SaveSOScreenshot() {
- vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New();
- w2i->SetInput(SOViewWidget->GetRenderWindow());
- w2i->Update();
- SaveScreenshot(w2i->GetOutput());
- w2i->Delete();
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveSEScreenshot()
+{
+ SaveScreenshot(SEViewWidget);
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SaveSEScreenshot() {
- vtkWindowToImageFilter *w2i = vtkWindowToImageFilter::New();
- w2i->SetInput(SEViewWidget->GetRenderWindow());
+
+//------------------------------------------------------------------------------
+void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
+{
+ QString Extensions = "Images( *.png);;";
+ Extensions += "Images( *.jpg);;";
+ Extensions += "Images( *.bmp);;";
+ Extensions += "Images( *.tif);;";
+ Extensions += "Images( *.ppm)";
+#ifdef VTK_USE_FFMPEG_ENCODER
+ Extensions += "Images( *.avi)";
+#endif
+#ifdef VTK_USE_MPEG2_ENCODER
+ Extensions += "Images( *.mpg)";
+#endif
+
+ int smIndex=GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ QString fileName = QFileDialog::getSaveFileName(this,
+ tr("Save As"),
+ itksys::SystemTools::GetFilenamePath(mSlicerManagers[smIndex]->GetFileName()).c_str(),
+ Extensions);
+
+ if (!fileName.isEmpty()) {
+ vtkSmartPointer<vtkWindowToImageFilter> w2i = vtkSmartPointer<vtkWindowToImageFilter>::New();
+ w2i->SetInput(widget->GetRenderWindow());
w2i->Update();
- SaveScreenshot(w2i->GetOutput());
- w2i->Delete();
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::SaveScreenshot(vtkImageData* image) {
- QString Extensions = "Images( *.png);;";
- Extensions += "Images( *.jpg);;";
- Extensions += "Images( *.bmp);;";
- Extensions += "Images( *.tif);;";
- Extensions += "Images( *.ppm)";
- QString fileName = QFileDialog::getSaveFileName(this,
- tr("Save As"),
- itksys::SystemTools::GetFilenamePath(
- mSlicerManagers[0]->GetFileName()).c_str(),
- Extensions);
- if (!fileName.isEmpty())
- {
- const char *ext = fileName.toStdString().c_str() + strlen(fileName.toStdString().c_str()) - 4;
- if (!strcmp(ext, ".bmp"))
- {
- vtkBMPWriter *bmp = vtkBMPWriter::New();
- bmp->SetInput(image);
- bmp->SetFileName(fileName.toStdString().c_str());
- bmp->Write();
- bmp->Delete();
- }
- else if (!strcmp(ext, ".tif"))
- {
- vtkTIFFWriter *tif = vtkTIFFWriter::New();
- tif->SetInput(image);
- tif->SetFileName(fileName.toStdString().c_str());
- tif->Write();
- tif->Delete();
- }
- else if (!strcmp(ext, ".ppm"))
- {
- vtkPNMWriter *pnm = vtkPNMWriter::New();
- pnm->SetInput(image);
- pnm->SetFileName(fileName.toStdString().c_str());
- pnm->Write();
- pnm->Delete();
- }
- else if (!strcmp(ext, ".png"))
- {
- vtkPNGWriter *png = vtkPNGWriter::New();
- png->SetInput(image);
- png->SetFileName(fileName.toStdString().c_str());
- png->Write();
- png->Delete();
- }
- else if (!strcmp(ext, ".jpg"))
- {
- vtkJPEGWriter *jpg = vtkJPEGWriter::New();
- jpg->SetInput(image);
- jpg->SetFileName(fileName.toStdString().c_str());
- jpg->Write();
- jpg->Delete();
- }
- else
- {
- QMessageBox::information(this,tr("Problem saving screenshot !"),tr("Cannot save image.\nPlease set a file extension !!!"));
- }
+ vtkImageData *image = w2i->GetOutput();
+
+ const char *ext = fileName.toStdString().c_str() + strlen(fileName.toStdString().c_str()) - 4;
+ if (!strcmp(ext, ".bmp")) {
+ vtkBMPWriter *bmp = vtkBMPWriter::New();
+ bmp->SetInput(image);
+ bmp->SetFileName(fileName.toStdString().c_str());
+ bmp->Write();
+ bmp->Delete();
+ } else if (!strcmp(ext, ".tif")) {
+ vtkTIFFWriter *tif = vtkTIFFWriter::New();
+ tif->SetInput(image);
+ tif->SetFileName(fileName.toStdString().c_str());
+ tif->Write();
+ tif->Delete();
+ } else if (!strcmp(ext, ".ppm")) {
+ vtkPNMWriter *pnm = vtkPNMWriter::New();
+ pnm->SetInput(image);
+ pnm->SetFileName(fileName.toStdString().c_str());
+ pnm->Write();
+ pnm->Delete();
+ } else if (!strcmp(ext, ".png")) {
+ vtkPNGWriter *png = vtkPNGWriter::New();
+ png->SetInput(image);
+ png->SetFileName(fileName.toStdString().c_str());
+ png->Write();
+ png->Delete();
+ } else if (!strcmp(ext, ".jpg")) {
+ vtkJPEGWriter *jpg = vtkJPEGWriter::New();
+ jpg->SetInput(image);
+ jpg->SetFileName(fileName.toStdString().c_str());
+ jpg->Write();
+ jpg->Delete();
+#ifdef VTK_USE_FFMPEG_ENCODER
+ } else if (!strcmp(ext, ".avi")) {
+ vtkFFMPEGWriter *mpg = vtkFFMPEGWriter::New();
+ mpg->SetInput(image);
+ mpg->SetFileName(fileName.toStdString().c_str());
+ mpg->SetQuality(2);
+ mpg->SetRate(5);
+ mpg->Start();
+
+ vvImage * vvImg = mSlicerManagers[smIndex]->GetImage();
+ int nSlice = vvImg->GetVTKImages().size();
+ for(int i=0; i<nSlice; i++)
+ {
+ mSlicerManagers[smIndex]->SetNextTSlice(0);
+ vtkSmartPointer<vtkWindowToImageFilter> w2i = vtkSmartPointer<vtkWindowToImageFilter>::New();
+ w2i->SetInput(widget->GetRenderWindow());
+ w2i->Update();
+ mpg->SetInput(w2i->GetOutput());
+ mpg->Write();
+ }
+ mpg->End();
+ mpg->Delete();
+#endif
+#ifdef VTK_USE_MPEG2_ENCODER
+ } else if (!strcmp(ext, ".mpg")) {
+ vtkMPEG2Writer *mpg = vtkMPEG2Writer::New();
+ mpg->SetInput(image);
+ mpg->SetFileName(fileName.toStdString().c_str());
+ mpg->Start();
+
+ vvImage * vvImg = mSlicerManagers[smIndex]->GetImage();
+ int nSlice = vvImg->GetVTKImages().size();
+ for(int i=0; i<nSlice; i++)
+ {
+ mSlicerManagers[smIndex]->SetNextTSlice(0);
+ vtkSmartPointer<vtkWindowToImageFilter> w2i = vtkSmartPointer<vtkWindowToImageFilter>::New();
+ w2i->SetInput(widget->GetRenderWindow());
+ w2i->Update();
+ mpg->SetInput(w2i->GetOutput());
+ mpg->Write();
+ }
+ mpg->End();
+ mpg->Delete();
+#endif
+ } else {
+ QMessageBox::information(this,tr("Problem saving screenshot !"),tr("Cannot save image.\nPlease set a file extension !!!"));
}
-
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::GoToCursor() {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- for (int column = 1; column < 5; column++)
- {
- if (DataTree->selectedItems()[0]->data(column,Qt::CheckStateRole).toInt() > 1)
- {
- double* cursorPos = mSlicerManagers[index]->GetSlicer(column-1)->GetCursorPosition();
- mSlicerManagers[index]->GetSlicer(column-1)->SetCurrentPosition(
- cursorPos[0],cursorPos[1],cursorPos[2],cursorPos[3]);
- mSlicerManagers[index]->UpdateViews(1,column-1);
- mSlicerManagers[index]->UpdateLinked(column-1);
- break;
- }
+
+//------------------------------------------------------------------------------
+void vvMainWindow::GoToCursor()
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ for (int column = 1; column < 5; column++) {
+ if (DataTree->selectedItems()[0]->data(column,Qt::CheckStateRole).toInt() > 1) {
+ double* cursorPos = mSlicerManagers[index]->GetSlicer(column-1)->GetCursorPosition();
+ mSlicerManagers[index]->GetSlicer(column-1)->SetCurrentPosition(
+ cursorPos[0],cursorPos[1],cursorPos[2],cursorPos[3]);
+ mSlicerManagers[index]->UpdateViews(1,column-1);
+ mSlicerManagers[index]->UpdateLinked(column-1);
+ break;
+ }
+ }
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+void vvMainWindow::PlayPause()
+{
+ if (playMode) {
+ playMode = 0;
+ playButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/player_play.png")));
+ ImageInfoChanged();
+ return;
+ } else {
+ int image_number=DataTree->topLevelItemCount();
+ bool has_temporal;
+ for (int i=0; i<image_number; i++)
+ if (mSlicerManagers[i]->GetImage()->GetVTKImages().size() > 1) {
+ has_temporal=true;
+ break;
+ }
+ if (has_temporal) {
+ playMode = 1;
+ playButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/player_pause.png")));
+ QTimer::singleShot(1000/mFrameRate, this, SLOT(PlayNext()));
}
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::PlayPause() {
- if (playMode)
- {
- playMode = 0;
- playButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/player_play.png")));
- ImageInfoChanged();
- return;
- }
- else
- {
- int image_number=DataTree->topLevelItemCount();
- bool has_temporal;
- for (int i=0;i<image_number;i++)
- if (mSlicerManagers[i]->GetImage()->GetVTKImages().size() > 1)
- {
- has_temporal=true;
- break;
- }
- if (has_temporal)
- {
- playMode = 1;
- playButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/player_pause.png")));
- QTimer::singleShot(1000/mFrameRate, this, SLOT(PlayNext()));
+//------------------------------------------------------------------------------
+void vvMainWindow::PlayNext()
+{
+ if (playMode && !this->isHidden()) {
+ int image_number=DataTree->topLevelItemCount();
+ ///Only play one slicer per SM, and only if the SM is being displayed
+ for (int i=0; i<image_number; i++)
+ for (int j=0; j<4; j++)
+ if (mSlicerManagers[i]->GetImage()->GetVTKImages().size() > 1 &&
+ DataTree->topLevelItem(i)->data(j+1,Qt::CheckStateRole).toInt() > 0) {
+ mSlicerManagers[i]->SetNextTSlice(j);
+ break;
}
- }
-}
-//====================================================================
-
-//====================================================================
-void vvMainWindow::PlayNext() {
- if (playMode && !this->isHidden())
- {
- int image_number=DataTree->topLevelItemCount();
- ///Only play one slicer per SM, and only if the SM is being displayed
- for (int i=0;i<image_number;i++)
- for (int j=0;j<4;j++)
- if (mSlicerManagers[i]->GetImage()->GetVTKImages().size() > 1 and
- DataTree->topLevelItem(i)->data(j+1,Qt::CheckStateRole).toInt() > 0)
- {
- mSlicerManagers[i]->SetNextTSlice(j);
- break;
- }
- QTimer::singleShot(1000/mFrameRate, this, SLOT(PlayNext()));
- }
+ QTimer::singleShot(1000/mFrameRate, this, SLOT(PlayNext()));
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
void vvMainWindow::ShowLastImage()
{
- if (mSlicerManagers.size() > 1)
- {
- QTreeWidgetItem * item=DataTree->topLevelItem(DataTree->topLevelItemCount()-1);
- CurrentImageChanged(mSlicerManagers.back()->GetId()); //select new image
- item->setData(1,Qt::CheckStateRole,2); //show the new image in the first panel
- DisplayChanged(item,1);
- }
-}
-
-//====================================================================
-void vvMainWindow::UpdateRenderWindows() {
- if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render();
- if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render();
- if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render();
- if (SEViewWidget->GetRenderWindow()) SEViewWidget->GetRenderWindow()->Render();
+ if (mSlicerManagers.size() > 1) {
+ QTreeWidgetItem * item=DataTree->topLevelItem(DataTree->topLevelItemCount()-1);
+ CurrentImageChanged(mSlicerManagers.back()->GetId()); //select new image
+ item->setData(1,Qt::CheckStateRole,2); //show the new image in the first panel
+ DisplayChanged(item,1);
+ }
}
-//====================================================================
-//====================================================================
-void vvMainWindow::ResampleCurrentImage() {
- vvResamplerDialog resampler;
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- resampler.SetSlicerManagers(mSlicerManagers,index);
- if (resampler.exec())
- AddImage(resampler.GetOutput(),resampler.GetOutputFileName());
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateRenderWindows()
+{
+ if (NOViewWidget->GetRenderWindow()) NOViewWidget->GetRenderWindow()->Render();
+ if (NEViewWidget->GetRenderWindow()) NEViewWidget->GetRenderWindow()->Render();
+ if (SOViewWidget->GetRenderWindow()) SOViewWidget->GetRenderWindow()->Render();
+ if (SEViewWidget->GetRenderWindow()) SEViewWidget->GetRenderWindow()->Render();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::SegmentationOnCurrentImage() {
- int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+//------------------------------------------------------------------------------
+void vvMainWindow::SegmentationOnCurrentImage()
+{
+ int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
- vvSegmentationDialog segmentation;
- segmentation.SetImage(mSlicerManagers[index]->GetSlicer(0)->GetImage());
- segmentation.exec();
+ vvSegmentationDialog segmentation;
+ segmentation.SetImage(mSlicerManagers[index]->GetSlicer(0)->GetImage());
+ segmentation.exec();
}
-//====================================================================
+//------------------------------------------------------------------------------
void vvMainWindow::SurfaceViewerLaunch()
{
- vvSurfaceViewerDialog surfaceViewer;
- surfaceViewer.exec();
+ vvSurfaceViewerDialog surfaceViewer;
+ surfaceViewer.exec();
}
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::AddImage(vvImage::Pointer image,std::string filename)
+
+//------------------------------------------------------------------------------
+int vvMainWindow::GetImageDuplicateFilenameNumber(std::string filename)
{
- vvSlicerManager* m = new vvSlicerManager(4);
- m->SetImage(image);
- m->SetFilename(filename);
- AddImage(m);
+ int number=0;
+ for(unsigned int l=0; l<mSlicerManagers.size(); l++) {
+ vvSlicerManager * v = mSlicerManagers[l];
+ if (v->GetBaseFileName() ==
+ vtksys::SystemTools::GetFilenameName(vtksys::SystemTools::GetFilenameWithoutLastExtension(filename))) {
+ number = std::max(number, v->GetBaseFileNameNumber()+1);
+ }
+ }
+ return number;
}
+//------------------------------------------------------------------------------
-//====================================================================
-void vvMainWindow::AddImage(vvSlicerManager * slicer_manager) {
- mSlicerManagers.push_back(slicer_manager);
-
- std::string filename = slicer_manager->GetFileName();
-
- //create an item in the tree with good settings
- QTreeWidgetItem *item = new QTreeWidgetItem();
- item->setData(0,Qt::UserRole,slicer_manager->GetFileName().c_str());//files[i].c_str());
- item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,filename.c_str());
- qApp->processEvents();
-
- for (int j = 1; j <= 4; j++) item->setData(j,Qt::CheckStateRole,1);
-
- //Create the buttons for reload and close
- qApp->processEvents();
- QTreePushButton* cButton = new QTreePushButton;
- cButton->setItem(item);
- cButton->setColumn(COLUMN_CLOSE_IMAGE);
- cButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/exit.png")));
- connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(CloseImage(QTreeWidgetItem*, int)));
-
- QTreePushButton* rButton = new QTreePushButton;
- rButton->setItem(item);
- rButton->setColumn(COLUMN_RELOAD_IMAGE);
- rButton->setIcon(QIcon(QString::fromUtf8(":/new/prefix1/icons/rotateright.png")));
- rButton->setEnabled(0);
- connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
- this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
-
- DataTree->addTopLevelItem(item);
- DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
- DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
-
- //set the id of the image
- QString id = slicer_manager->GetFileName().c_str() + QString::number(mSlicerManagers.size()-1);
- item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
- mSlicerManagers.back()->SetId(id.toStdString());
-
- linkPanel->addImage(filename, id.toStdString());
-
- connect(mSlicerManagers.back(),SIGNAL(currentImageChanged(std::string)),
- this,SLOT(CurrentImageChanged(std::string)));
- connect(mSlicerManagers.back(),SIGNAL(
- UpdatePosition(int, double, double, double, double, double, double, double)),this,
- SLOT(MousePositionChanged(int,double, double, double, double, double, double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateVector(int, double, double, double, double)),
- this, SLOT(VectorChanged(int,double,double,double, double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateOverlay(int, double, double)),
- this, SLOT(OverlayChanged(int,double,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateFusion(int, double)),
- this, SLOT(FusionChanged(int,double)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateWindows(int, int, int)),
- this,SLOT(WindowsChanged(int, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(WindowLevelChanged(double, double,int, int)),
- this,SLOT(WindowLevelChanged(double, double, int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSlice(int,int)),
- this,SLOT(UpdateSlice(int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateTSlice(int, int)),
- this,SLOT(UpdateTSlice(int, int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateSliceRange(int,int,int,int,int)),
- this,SLOT(UpdateSliceRange(int,int,int,int,int)));
- connect(mSlicerManagers.back(),SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)),
- this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int)));
- connect(mSlicerManagers.back(),SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
- UpdateTree();
- qApp->processEvents();
- InitSlicers();
- ShowLastImage();
- InitDisplay();
- qApp->processEvents();
+//------------------------------------------------------------------------------
+vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filename)
+{
+ // Change filename if another image exist with the same name
+ int number = GetImageDuplicateFilenameNumber(filename);
+
+ // Create new SliceManager
+ vvSlicerManager* slicer_manager = new vvSlicerManager(4);
+ slicer_manager->SetImage(image);//, IMAGE, number);
+ // filename = filename+"_"+clitk::toString(number);
+ slicer_manager->SetFilename(filename, number);
+ mSlicerManagers.push_back(slicer_manager);
+
+ //create an item in the tree with good settings
+ QTreeWidgetItem *item = new QTreeWidgetItem();
+ item->setData(0,Qt::UserRole,slicer_manager->GetFileName().c_str());//files[i].c_str());
+ item->setData(COLUMN_IMAGE_NAME,Qt::DisplayRole,slicer_manager->GetFileName().c_str());//filename.c_str());
+ qApp->processEvents();
+
+ for (int j = 1; j <= 4; j++) item->setData(j,Qt::CheckStateRole,1);
+
+ //Create the buttons for reload and close
+ qApp->processEvents();
+ QTreePushButton* cButton = new QTreePushButton;
+ cButton->setItem(item);
+ cButton->setColumn(COLUMN_CLOSE_IMAGE);
+ cButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/exit.png")));
+ connect(cButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(CloseImage(QTreeWidgetItem*, int)));
+
+ QTreePushButton* rButton = new QTreePushButton;
+ rButton->setItem(item);
+ rButton->setColumn(COLUMN_RELOAD_IMAGE);
+ rButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/rotateright.png")));
+ rButton->setEnabled(0);
+ connect(rButton,SIGNAL(clickedInto(QTreeWidgetItem*, int)),
+ this,SLOT(ReloadImage(QTreeWidgetItem*, int)));
+
+ DataTree->addTopLevelItem(item);
+ DataTree->setItemWidget(item, COLUMN_CLOSE_IMAGE, cButton);
+ DataTree->setItemWidget(item, COLUMN_RELOAD_IMAGE, rButton);
+
+ //set the id of the image
+ QString id = slicer_manager->GetFileName().c_str() + QString::number(mSlicerManagers.size()-1);
+ item->setData(COLUMN_IMAGE_NAME,Qt::UserRole,id.toStdString().c_str());
+ mSlicerManagers.back()->SetId(id.toStdString());
+
+ linkPanel->addImage(slicer_manager->GetFileName().c_str()// filename
+ , id.toStdString());
+
+ connect(mSlicerManagers.back(), SIGNAL(currentImageChanged(std::string)),
+ this, SLOT(CurrentImageChanged(std::string)));
+ connect(mSlicerManagers.back(), SIGNAL(currentPickedImageChanged(std::string)),
+ this, SLOT(CurrentPickedImageChanged(std::string)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdatePosition(int, double, double, double, double, double, double, double)),
+ this, SLOT(MousePositionChanged(int,double, double, double, double, double, double, double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateVector(int, double, double, double, double)),
+ this, SLOT(VectorChanged(int,double,double,double, double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateOverlay(int, double, double)),
+ this, SLOT(OverlayChanged(int,double,double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateFusion(int, double)),
+ this, SLOT(FusionChanged(int,double)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateWindows(int, int, int)),
+ this,SLOT(WindowsChanged(int, int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(WindowLevelChanged(double, double,int, int)),
+ this,SLOT(WindowLevelChanged(double, double, int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateSlice(int,int)),
+ this,SLOT(UpdateSlice(int,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateTSlice(int, int)),
+ this,SLOT(UpdateTSlice(int, int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateSliceRange(int,int,int,int,int)),
+ this,SLOT(UpdateSliceRange(int,int,int,int,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateLinkManager(std::string,int,double,double,double,int)),
+ this,SLOT(UpdateLinkManager(std::string,int,double,double,double,int)));
+ connect(mSlicerManagers.back(), SIGNAL(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)),
+ this,SLOT(UpdateLinkedNavigation(std::string,vvSlicerManager*,vvSlicer*)));
+ connect(mSlicerManagers.back(), SIGNAL(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)),
+ this,SLOT(ChangeImageWithIndexOffset(vvSlicerManager*,int,int)));
+ connect(mSlicerManagers.back(), SIGNAL(LandmarkAdded()),landmarksPanel,SLOT(AddPoint()));
+ UpdateTree();
+ qApp->processEvents();
+ InitSlicers();
+ ShowLastImage();
+ InitDisplay();
+ qApp->processEvents();
+
+ // End
+ ImageInfoChanged();
+ return slicer_manager;
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvMainWindow::UpdateCurrentSlicer()
+{
+ int index = -1;
+ if (DataTree->selectedItems().size() > 0) {
+ index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
+ }
+ mSlicerManagerCurrentIndex = index;
}
-//====================================================================
+//------------------------------------------------------------------------------
+
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff