#include <vtkLight.h>
#include <vtkLightCollection.h>
#include <vtkScalarBarActor.h>
+#include <vtkImageProperty.h>
#include <vtkLookupTable.h>
#include <vtkRenderer.h>
legend = vtkSmartPointer<vtkScalarBarActor>::New();
//legend->SetTitle("test!");
- legend->SetPosition(0.82,0.18);
- legend->SetWidth(0.1);
+ legend->SetPosition(0.82,0.08);
+ //legend->SetWidth(0.1);
legend->SetVisibility(0);
- legend->SetLabelFormat("%.1f");
+ legend->SetLabelFormat("%.1e");
this->GetRenderer()->AddActor(legend);
showFusionLegend = false;
mConcatenatedTransform = vtkSmartPointer<vtkTransform>::New();
mConcatenatedFusionTransform = vtkSmartPointer<vtkTransform>::New();
mConcatenatedOverlayTransform = vtkSmartPointer<vtkTransform>::New();
+ mConcatenatedVFTransform = vtkSmartPointer<vtkTransform>::New();
mFirstSetSliceOrientation = true;
}
//------------------------------------------------------------------------------
}
//------------------------------------------------------------------------------
+//------------------------------------------------------------------------------
+void vvSlicer::SetInterpolationImageReslice(int interpolation)
+{
+ mImageReslice->SetInterpolationMode(interpolation);
+}
+//------------------------------------------------------------------------------
+
//------------------------------------------------------------------------------
void vvSlicer::SetCurrentPosition(double x, double y, double z, int t)
{
mConcatenatedTransform->Identity();
mConcatenatedTransform->Concatenate(mImage->GetTransform()[0]);
mConcatenatedTransform->Concatenate(mSlicingTransform);
- mImageReslice->SetResliceTransform(mConcatenatedTransform);
+ mImageReslice->SetResliceAxes(mConcatenatedTransform->GetMatrix());
#if VTK_MAJOR_VERSION <= 5
mImageReslice->SetInput(0, mImage->GetFirstVTKImageData());
#else
#if VTK_MAJOR_VERSION <= 5
this->GetInput()->GetWholeExtent(extent);
#else
- int* ext = mImageReslice->GetInputInformation()->Get(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT());
- copyExtent(ext, extent);
+ mImageReslice->GetOutput()->GetExtent(extent);
#endif
// Prevent crash when reload -> change slice if outside extent
#if VTK_MAJOR_VERSION <= 5
mImageReslice->GetOutput()->SetUpdateExtent(extent);
mImageReslice->GetOutput()->Update();
+#elif VTK_MAJOR_VERSION >= 8 || (VTK_MAJOR_VERSION == 7 && VTK_MINOR_VERSION >= 1)
+ mImageReslice->UpdateExtent(extent);
+ mImageReslice->Update();
#else
- //mImageReslice->SetUpdateExtent(extent);
+ mImageReslice->SetUpdateExtent(extent);
mImageReslice->Update();
#endif
mConcatenatedOverlayTransform->Identity();
mConcatenatedOverlayTransform->Concatenate(mOverlay->GetTransform()[0]);
mConcatenatedOverlayTransform->Concatenate(mSlicingTransform);
- mOverlayReslice->SetResliceTransform(mConcatenatedOverlayTransform);
+ mOverlayReslice->SetResliceAxes(mConcatenatedOverlayTransform->GetMatrix());
#if VTK_MAJOR_VERSION <= 5
mOverlayReslice->SetInput(0, mOverlay->GetFirstVTKImageData());
mImageReslice->UpdateInformation();
mConcatenatedFusionTransform->Identity();
mConcatenatedFusionTransform->Concatenate(mFusion->GetTransform()[0]);
mConcatenatedFusionTransform->Concatenate(mSlicingTransform);
- mFusionReslice->SetResliceTransform(mConcatenatedFusionTransform);
+ mFusionReslice->SetResliceAxes(mConcatenatedFusionTransform->GetMatrix());
#if VTK_MAJOR_VERSION <= 5
mFusionReslice->SetInput(0, mFusion->GetFirstVTKImageData());
mFusionReslice->UpdateInformation();
mVFVisibility = true;
if (!mAAFilter) {
+ mVFReslice = vtkSmartPointer<vtkImageReslice>::New();
+ mVFReslice->SetInterpolationModeToLinear();
+ mVFReslice->AutoCropOutputOn();
+ mVFReslice->SetBackgroundColor(-1000,-1000,-1000,1);
mAAFilter= vtkSmartPointer<vtkAssignAttribute>::New();
mVOIFilter = vtkSmartPointer<vtkExtractVOI>::New();
mVOIFilter->SetSampleRate(mSubSampling,mSubSampling,mSubSampling);
}
+
+ mConcatenatedVFTransform->Identity();
+ mConcatenatedVFTransform->Concatenate(mVF->GetTransform()[0]);
+ mConcatenatedVFTransform->Concatenate(mSlicingTransform);
+ mVFReslice->SetResliceAxes(mConcatenatedVFTransform->GetMatrix());
+#if VTK_MAJOR_VERSION <= 5
+ mVFReslice->SetInput(0, mVF->GetFirstVTKImageData());
+#else
+ mVFReslice->SetInputData(0, mVF->GetFirstVTKImageData());
+#endif
+ mVFReslice->Update();
+
#if VTK_MAJOR_VERSION <= 5
- mVOIFilter->SetInput(vf->GetFirstVTKImageData());
+ mVOIFilter->SetInput(mVFReslice->GetOutput());
mAAFilter->SetInput(mVOIFilter->GetOutput());
#else
- mVOIFilter->SetInputData(vf->GetFirstVTKImageData());
+ mVOIFilter->SetInputConnection(mVFReslice->GetOutputPort());
mAAFilter->SetInputConnection(mVOIFilter->GetOutputPort());
#endif
///This tells VTK to use the scalar (pixel) data of the image to draw the little arrows
#else
mVFMapper->SetInputConnection(mGlyphFilter->GetOutputPort());
#endif
+#ifndef VTK_OPENGL2
mVFMapper->ImmediateModeRenderingOn();
+#endif
mVFMapper->SetLookupTable(mVFColorLUT);
if (!mVFActor)
if (mVF && mVFActor->GetVisibility()) {
if (mVF->GetVTKImages().size() > (unsigned int)mCurrentTSlice)
#if VTK_MAJOR_VERSION <= 5
- mVOIFilter->SetInput(mVF->GetVTKImages()[mCurrentTSlice]);
+ mVFReslice->SetInput(mVF->GetVTKImages()[mCurrentTSlice]);
#else
- mVOIFilter->SetInputData(mVF->GetVTKImages()[mCurrentTSlice]);
+ mVFReslice->SetInputData(mVF->GetVTKImages()[mCurrentTSlice]);
#endif
+ // Update overlay transform
+ mConcatenatedVFTransform->Identity();
+ mConcatenatedVFTransform->Concatenate(mVF->GetTransform()[mCurrentTSlice]);
+ mConcatenatedVFTransform->Concatenate(mSlicingTransform);
}
//update the overlay
if (mOverlay && mOverlayActor->GetVisibility()) {
int vvSlicer::GetMaxCurrentTSlice()
{
int t = mCurrentTSlice;
- if(mOverlay)
+ if(mOverlay && mOverlayActor->GetVisibility())
t = std::max(t, mCurrentOverlayTSlice);
- if(mFusion&& (mFusionSequenceCode<0)) //ignore fusionSequence data: for these, the times are not to be related (this way)
+ if(mFusion&& (mFusionSequenceCode<0) && mFusionActor->GetVisibility()) //ignore fusionSequence data: for these, the times are not to be related (this way)
t = std::max(t, mCurrentFusionTSlice);
return t;
}
if(mOverlay)
AdjustResliceToSliceOrientation(mOverlayReslice);
+ if(mVF)
+ AdjustResliceToSliceOrientation(mVFReslice);
+
// Update the viewer
// Go to current cursor position
offset = -1;
if (mVF && mVFVisibility) {
+ AdjustResliceToSliceOrientation(mVFReslice);
int vfExtent[6];
#if VTK_MAJOR_VERSION <= 5
mVF->GetVTKImages()[0]->UpdateInformation();
- this->ConvertImageToImageDisplayExtent(input, w_ext, mVF->GetVTKImages()[0], vfExtent);
+ this->ConvertImageToImageDisplayExtent(input, w_ext, mVFReslice->GetOutput(), vfExtent);
bool out = ClipDisplayedExtent(vfExtent, mVOIFilter->GetInput()->GetWholeExtent());
#else
mVOIFilter->Update();
- this->ConvertImageToImageDisplayExtent(mImageReslice->GetOutputInformation(0), w_ext, mVF->GetVTKImages()[0], vfExtent);
+ this->ConvertImageToImageDisplayExtent(mImageReslice->GetOutputInformation(0), w_ext, mVFReslice->GetOutput(), vfExtent);
bool out = ClipDisplayedExtent(vfExtent, mVOIFilter->GetInputInformation()->Get(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT()));
#endif
mVFActor->SetVisibility(!out);
//image->SetUpdateExtent(ix, ix, iy, iy, iz, iz);
//image->Update();
#endif
-
return image->GetScalarComponentAsDouble(ix, iy, iz, component);
}
//----------------------------------------------------------------------------
} else legend->SetVisibility(0);
if (ca->GetVisibility()) {
-
std::stringstream worldPos(" ");
double pt[3];
mConcatenatedTransform->TransformPoint(mCurrent, pt);
Y <= mImage->GetVTKImages()[mCurrentTSlice]->GetWholeExtent()[3]+0.5 &&
Z >= mImage->GetVTKImages()[mCurrentTSlice]->GetWholeExtent()[4]-0.5 &&
Z <= mImage->GetVTKImages()[mCurrentTSlice]->GetWholeExtent()[5]+0.5) {
-
-
- int ix, iy, iz;
- double value = this->GetScalarComponentAsDouble(mImage->GetVTKImages()[mCurrentTSlice], X, Y, Z, ix, iy, iz);
-
- if(ImageActor->GetVisibility())
- worldPos << "data value : " << value << std::endl;
-
- worldPos << "mm : " << lrint(mCurrentBeforeSlicingTransform[0]) << ' '
- << lrint(mCurrentBeforeSlicingTransform[1]) << ' '
- << lrint(mCurrentBeforeSlicingTransform[2]) << ' '
- << mCurrentTSlice
- << std::endl;
- worldPos << "pixel : " << ix << ' '
- << iy << ' '
- << iz << ' '
- << mCurrentTSlice
- << std::endl;
- }
#else
if (X >= mImage->GetVTKImages()[mCurrentTSlice]->GetInformation()->Get(vtkDataObject::DATA_EXTENT())[0]-0.5 &&
X <= mImage->GetVTKImages()[mCurrentTSlice]->GetInformation()->Get(vtkDataObject::DATA_EXTENT())[1]+0.5 &&
Y <= mImage->GetVTKImages()[mCurrentTSlice]->GetInformation()->Get(vtkDataObject::DATA_EXTENT())[3]+0.5 &&
Z >= mImage->GetVTKImages()[mCurrentTSlice]->GetInformation()->Get(vtkDataObject::DATA_EXTENT())[4]-0.5 &&
Z <= mImage->GetVTKImages()[mCurrentTSlice]->GetInformation()->Get(vtkDataObject::DATA_EXTENT())[5]+0.5) {
-
+#endif
int ix, iy, iz;
double value = this->GetScalarComponentAsDouble(mImage->GetVTKImages()[mCurrentTSlice], X, Y, Z, ix, iy, iz);
-
if(ImageActor->GetVisibility())
worldPos << "data value : " << value << std::endl;
-
- worldPos << "mm : " << lrint(mCurrentBeforeSlicingTransform[0]) << ' '
- << lrint(mCurrentBeforeSlicingTransform[1]) << ' '
- << lrint(mCurrentBeforeSlicingTransform[2]) << ' '
+ worldPos << "mm : " << lrint(mCurrent[0]) << ' '
+ << lrint(mCurrent[1]) << ' '
+ << lrint(mCurrent[2]) << ' '
<< mCurrentTSlice
<< std::endl;
worldPos << "pixel : " << ix << ' '
<< std::endl;
}
-#endif
ca->SetText(1,worldPos.str().c_str());
std::stringstream slicePos;
}
#if VTK_MAJOR_VERSION <= 5
mOverlayMapper->GetOutput()->SetUpdateExtent(mOverlayActor->GetDisplayExtent());
+#elif VTK_MAJOR_VERSION >= 8 || (VTK_MAJOR_VERSION == 7 && VTK_MINOR_VERSION >= 1)
+ mOverlayMapper->UpdateExtent(mOverlayActor->GetDisplayExtent());
#else
mOverlayMapper->SetUpdateExtent(mOverlayActor->GetDisplayExtent());
#endif
if (mFusion && mFusionActor->GetVisibility()) {
#if VTK_MAJOR_VERSION <= 5
mFusionMapper->GetOutput()->SetUpdateExtent(mFusionActor->GetDisplayExtent());
+#elif VTK_MAJOR_VERSION >= 8 || (VTK_MAJOR_VERSION == 7 && VTK_MINOR_VERSION >= 1)
+ mFusionMapper->UpdateExtent(mFusionActor->GetDisplayExtent());
#else
mFusionMapper->SetUpdateExtent(mFusionActor->GetDisplayExtent());
#endif