Program: vv
Module: $RCSfile: vvToolBinarize.cxx,v $
Language: C++
- Date: $Date: 2010/02/03 13:08:55 $
- Version: $Revision: 1.4 $
+ Date: $Date: 2010/03/01 15:38:09 $
+ Version: $Revision: 1.10 $
Author : David Sarrut (david.sarrut@creatis.insa-lyon.fr)
Copyright (C) 2008
#include "clitkBinarizeImageGenericFilter.h"
-#include "vtkImageActor.h"
-#include "vtkCamera.h"
+#include <vtkImageActor.h>
+#include <vtkCamera.h>
+#include <vtkImageClip.h>
//------------------------------------------------------------------------------
// Create the tool and automagically (I like this word) insert it in
//------------------------------------------------------------------------------
-vvToolBinarize::vvToolBinarize(QWidget * parent, Qt::WindowFlags f)
- :QDialog(parent,f), vvToolBase<vvToolBinarize>(), Ui::vvToolBinarize()
-{
- // Set Modality : dialog is not modal but stay always on top because
- // parent is set at construction
- setModal(false);
- setAttribute(Qt::WA_DeleteOnClose);
+void vvToolBinarize::Initialize() {
+ SetToolName("Binarize");
+ SetToolMenuName("Binarize");
+ SetToolIconFilename(":/new/prefix1/icons/binarize.png");
+ SetToolTip("Image interactive binarization with thresholds.");
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+vvToolBinarize::vvToolBinarize(vvMainWindowBase * parent, Qt::WindowFlags f)
+ :vvToolWidgetBase(parent,f),
+ vvToolBase<vvToolBinarize>(parent),
+ Ui::vvToolBinarize()
+{
// GUI Initialization
- setupUi(this);
+ Ui_vvToolBinarize::setupUi(mToolWidget);
+ mInteractiveDisplayIsEnabled = mCheckBoxInteractiveDisplay->isChecked();
// Connect signals & slots
- connect(mToolInputSelectionWidget, SIGNAL(accepted()), this, SLOT(InputIsSelected()));
- connect(mToolInputSelectionWidget, SIGNAL(rejected()), this, SLOT(close()));
- connect(buttonBox, SIGNAL(accepted()), this, SLOT(apply()));
- connect(buttonBox, SIGNAL(rejected()), this, SLOT(close()));
connect(mThresholdSlider1, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT1(double)));
connect(mThresholdSlider2, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT2(double)));
-
connect(mRadioButtonLowerThan, SIGNAL(toggled(bool)), this, SLOT(enableLowerThan(bool)));
-
- // VTK objects
- mClipper = vtkImageClip::New();
- mSquares1 = vtkMarchingSquares::New();
- mSquaresMapper1 = vtkPolyDataMapper::New();
- mSquaresActor1 = vtkActor::New();
+ connect(mCheckBoxUseFG, SIGNAL(toggled(bool)), this, SLOT(useFGBGtoggled(bool)));
+ connect(mCheckBoxUseBG, SIGNAL(toggled(bool)), this, SLOT(useFGBGtoggled(bool)));
+ connect(mCheckBoxInteractiveDisplay, SIGNAL(toggled(bool)), this, SLOT(InteractiveDisplayToggled(bool)));
// Initialize some widget
mThresholdSlider1->SetText("");
mFGSlider->SetText("Foreground value");
mBGSlider->SetText("Background value");
- // Disable main widget while input image is not selected
- toolMainWidget->setEnabled(false);
-
// Main filter
mFilter = new clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>; //DS PUT IN BASECLASS ?
-
- // Initialize the input selection (mFilter should be create before !)
- InitializeListOfInputImages(mToolInputSelectionWidget, mFilter);
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
+//------------------------------------------------------------------------------
+void vvToolBinarize::InteractiveDisplayToggled(bool b) {
+ mInteractiveDisplayIsEnabled = b;
+ if (!mInteractiveDisplayIsEnabled) {
+ RemoveVTKObjects();
+ }
+ else {
+ for(unsigned int i=0; i<mImageContour.size(); i++)
+ mImageContour[i]->showActors();
+ if (mCurrentSlicerManager)
+ mCurrentSlicerManager->Render();
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::RemoveVTKObjects() {
+ for(unsigned int i=0; i<mImageContour.size(); i++)
+ mImageContour[i]->hideActors();
+ if (mCurrentSlicerManager)
+ mCurrentSlicerManager->Render();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+bool vvToolBinarize::close() {
+ RemoveVTKObjects();
+ return vvToolWidgetBase::close();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::reject() {
+ RemoveVTKObjects();
+ return vvToolWidgetBase::reject();
+}
+//------------------------------------------------------------------------------
+
+
//------------------------------------------------------------------------------
void vvToolBinarize::enableLowerThan(bool b) {
if (!b) {
//------------------------------------------------------------------------------
-void vvToolBinarize::InputIsSelected() {
+void vvToolBinarize::useFGBGtoggled(bool) {
+ if (!mCheckBoxUseBG->isChecked() && !mCheckBoxUseFG->isChecked())
+ mCheckBoxUseBG->toggle();
+}
+//------------------------------------------------------------------------------
- // Common
- int index = mToolInputSelectionWidget->GetSelectedInputIndex();
- mCurrentSliceManager = mSlicerManagersCompatible[index];
- mCurrentImage = mCurrentSliceManager->GetImage();
- toolMainWidget->setEnabled(true);
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::InputIsSelected(vvSlicerManager * m) {
+ mCurrentSlicerManager = m;
// Specific for this gui
+ mThresholdSlider1->SetValue(0);
+ mThresholdSlider2->SetValue(0);
mThresholdSlider1->SetImage(mCurrentImage);
mThresholdSlider2->SetImage(mCurrentImage);
mFGSlider->SetImage(mCurrentImage);
mBGSlider->SetImage(mCurrentImage);
+ // DD(mCurrentSlicerManager->GetFileName().c_str());
+ mFGSlider->SetMaximum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMax());
+ mFGSlider->SetMinimum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMin());
+ mBGSlider->SetMaximum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMax());
+ mBGSlider->SetMinimum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMin());
mFGSlider->SetValue(1);
mBGSlider->SetValue(0);
- DD(mCurrentSliceManager->GetFileName().c_str());
-
- DD("VTK");
- DD(mCurrentSliceManager->NumberOfSlicers());
- // mClipper->SetInput(mCurrentSliceManager->GetSlicer(0)->GetInput());
- DD(mCurrentImage->GetFirstVTKImageData());
- DD(mClipper);
- DD(mCurrentSliceManager->GetSlicer(0));
- mClipper->SetInput(mCurrentImage->GetFirstVTKImageData());
-
- mSquares1->SetInput(mClipper->GetOutput());
- mSquaresMapper1->SetInput(mSquares1->GetOutput());
- mSquaresActor1->SetMapper(mSquaresMapper1);
- mSquaresActor1->GetProperty()->SetColor(1.0,0,0);
- mSquaresActor1->SetPickable(0);
- mCurrentSliceManager->GetSlicer(0)->GetRenderer()->AddActor(mSquaresActor1);
- mSquares1->Update();
-
-
- DD("VTK end");
-
- // connect(mCurrentSliceManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
- connect(mCurrentSliceManager,SIGNAL(UpdateSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
- //connect(mCurrentSliceManager,SIGNAL(UpdateSliceRange(int,int,int,int,int)),this,SLOT(UpdateSlice(int, int)));
- // connect(mCurrentSliceManager,SIGNAL(LandmarkAdded()),this,SLOT(InsertSeed()));
+ // VTK objects for interactive display
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+ mImageContour.push_back(new vvImageContour);
+ mImageContour[i]->setSlicer(mCurrentSlicerManager->GetSlicer(i));
+ }
+ valueChangedT1(mThresholdSlider1->GetValue());
+ connect(mCurrentSlicerManager,SIGNAL(UpdateSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
+ connect(mCurrentSlicerManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
+
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
void vvToolBinarize::UpdateSlice(int slicer,int slices) {
-
- // A METTRE SUR TOUT LES SLICES ! PAS QUE 0
-
- // !! signal update slice pas tjs quand move slicer ???
-
-
- int slice = mCurrentSliceManager->GetSlicer(0)->GetSlice();
- //int tslice = mCurrentSliceManager->GetSlicer(0)->GetTSlice();
- mClipper->SetInput(mCurrentSliceManager->GetSlicer(0)->GetInput());
- int* extent = mCurrentSliceManager->GetSlicer(0)->GetImageActor()->GetDisplayExtent();
- mClipper->SetOutputWholeExtent(extent[0],extent[1],extent[2],extent[3],extent[4],extent[5]);
- int i;
- for (i = 0; i < 6;i = i+2)
- {
- if (extent[i] == extent[i+1])
- {
- break;
- }
- }
-
- switch (i)
- {
- case 0:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[0] > slice)
- {
- mSquaresActor1->SetPosition(1,0,0);
- // mSquaresActor2->SetPosition(1,0,0);
- }
- else
- {
- mSquaresActor1->SetPosition(-1,0,0);
- // mSquaresActor2->SetPosition(-1,0,0);
- }
- break;
- case 2:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[1] > slice)
- {
- mSquaresActor1->SetPosition(0,1,0);
- // mSquaresActor2->SetPosition(0,1,0);
- }
- else
- {
- mSquaresActor1->SetPosition(0,-1,0);
- // mSquaresActor2->SetPosition(0,-1,0);
- }
- break;
- case 4:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[2] > slice)
- {
- mSquaresActor1->SetPosition(0,0,1);
- // mSquaresActor2->SetPosition(0,0,1);
- }
- else
- {
- mSquaresActor1->SetPosition(0,0,-1);
- // mSquaresActor2->SetPosition(0,0,-1);
- }
- break;
- }
- mSquares1->Update();
- // mSquares2->Update();
-
- mCurrentSliceManager->Render();
+ if (!mInteractiveDisplayIsEnabled) return;
+ if (!mCurrentSlicerManager) close();
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+ mImageContour[i]->update(mThresholdSlider1->GetValue());
+ }
+ mCurrentSlicerManager->Render();
}
//------------------------------------------------------------------------------
DD(good);
*/
+ mArgsInfo.imagetypes_flag = 0;
mArgsInfo.upper_given = 0;
mArgsInfo.lower_given = 0;
bool inverseBGandFG = false;
- if (mRadioButtonGreaterThan->isChecked()) { // Greater Than (and Lower Than)
- mArgsInfo.lower_given = 1;
- mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
- DD(mArgsInfo.lower_arg);
- if (mRadioButtonLowerThan->isChecked()) {
- mArgsInfo.upper_given = 1;
- mArgsInfo.upper_arg = mThresholdSlider2->GetValue();
- if (mArgsInfo.upper_arg<mArgsInfo.lower_arg) {
- mArgsInfo.upper_given = 0;
- DD("TODO : lower thres greater than greater thres ! Ignoring ");
- }
- }
- }
- else {
- if (mRadioButtonEqualThan->isChecked()) {
- mArgsInfo.lower_given = 1;
- mArgsInfo.upper_given = 1;
- mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
- mArgsInfo.upper_arg = mThresholdSlider1->GetValue();
- }
- else {
- mArgsInfo.lower_given = 1;
- mArgsInfo.upper_given = 1;
- mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
- mArgsInfo.upper_arg = mThresholdSlider1->GetValue();
- inverseBGandFG = true;
+ mArgsInfo.lower_given = 1;
+ mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
+ // DD(mArgsInfo.lower_arg);
+ if (mRadioButtonLowerThan->isChecked()) {
+ mArgsInfo.upper_given = 1;
+ mArgsInfo.upper_arg = mThresholdSlider2->GetValue();
+ if (mArgsInfo.upper_arg<mArgsInfo.lower_arg) {
+ mArgsInfo.upper_given = 0;
+ DD("TODO : lower thres greater than greater thres ! Ignoring ");
}
}
mArgsInfo.fg_arg = mFGSlider->GetValue();
mArgsInfo.bg_arg = mBGSlider->GetValue();
- DD(inverseBGandFG);
if (inverseBGandFG) {
mArgsInfo.fg_arg = mFGSlider->GetValue();
mArgsInfo.bg_arg = mBGSlider->GetValue();
mArgsInfo.fg_given = 1;
mArgsInfo.bg_given = 1;
- mArgsInfo.useBG_flag = mCheckBoxUseBG->isChecked();
- mArgsInfo.useFG_flag = mCheckBoxUseFG->isChecked();
-
- DD(mArgsInfo.useBG_flag);
- DD(mArgsInfo.useFG_flag);
+ if (mCheckBoxUseBG->isChecked()) {
+ if (mCheckBoxUseFG->isChecked()) mArgsInfo.mode_arg = (char*)"both";
+ else mArgsInfo.mode_arg = (char*)"BG";
+ }
+ else mArgsInfo.mode_arg = (char*)"FG";
- mArgsInfo.verbose_flag = true;
+ mArgsInfo.verbose_flag = false;
// Required (even if not used)
mArgsInfo.input_given = 0;
//------------------------------------------------------------------------------
void vvToolBinarize::apply() {
- DD("Apply");
-
+ if (!mCurrentSlicerManager) close();
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
GetArgsInfoFromGUI();
- DD(mArgsInfo.lower_arg);
- // cmdline_parser2(argc, argv, &args_info, 1, 1, 0);
- // if (args_info.config_given)
- // cmdline_parser_configfile ("toto.config", &args_info, 0, 0, 1);
- // else cmdline_parser(argc, argv, &args_info);
-
// Main filter
clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::Pointer filter =
- clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::New();
+
clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::New();
filter->SetArgsInfo(mArgsInfo);
filter->SetInputVVImage(mCurrentImage);
filter->Update();
- // Output ???
+ // Output
vvImage::Pointer output = filter->GetOutputVVImage();
- DD(output->GetScalarTypeAsString());
- CREATOR(vvToolBinarize)->mMainWindow->AddImage(output,"toto.mhd");
+ std::ostringstream osstream;
+ osstream << "Binarized_" << mCurrentSlicerManager->GetSlicer(0)->GetFileName() << ".mhd";
+ AddImage(output,osstream.str());
+ QApplication::restoreOverrideCursor();
close();
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
void vvToolBinarize::valueChangedT1(double v) {
+ if (!mCurrentSlicerManager) close();
mThresholdSlider2->SetMinimum(v);
- DD(v);
- int m1 = (int)lrint(v);
- DD(m1);
- int* extent = mCurrentSliceManager->GetSlicer(0)->GetImageActor()->GetDisplayExtent();
- mClipper->SetOutputWholeExtent(extent[0],extent[1],extent[2],extent[3],extent[4],extent[5]);
-
-
-int slice = mCurrentSliceManager->GetSlicer(0)->GetSlice();
-
- int i;
-for (i = 0; i < 6;i = i+2)
- {
- if (extent[i] == extent[i+1])
- {
- break;
- }
- }
-
- switch (i)
- {
- case 0:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[0] > slice)
- {
- mSquaresActor1->SetPosition(1,0,0);
- // mSquaresActor2->SetPosition(1,0,0);
- }
- else
- {
- mSquaresActor1->SetPosition(-1,0,0);
- // mSquaresActor2->SetPosition(-1,0,0);
- }
- break;
- case 2:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[1] > slice)
- {
- mSquaresActor1->SetPosition(0,1,0);
- // mSquaresActor2->SetPosition(0,1,0);
- }
- else
- {
- mSquaresActor1->SetPosition(0,-1,0);
- // mSquaresActor2->SetPosition(0,-1,0);
- }
- break;
- case 4:
- if (mCurrentSliceManager->GetSlicer(0)->GetRenderer()->GetActiveCamera()->GetPosition()[2] > slice)
- {
- mSquaresActor1->SetPosition(0,0,1);
- // mSquaresActor2->SetPosition(0,0,1);
- }
- else
- {
- mSquaresActor1->SetPosition(0,0,-1);
- // mSquaresActor2->SetPosition(0,0,-1);
- }
- break;
- }
-
-
-
-
- mSquares1->SetValue(0,m1);
- mSquares1->Update();
- mCurrentSliceManager->Render();
+ int m1 = (int)lrint(v);
+ if (!mInteractiveDisplayIsEnabled) return;
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+ mImageContour[i]->update(m1);
+ }
+ mCurrentSlicerManager->Render();
}
//------------------------------------------------------------------------------
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff