/*=========================================================================
+ Program: vv http://www.creatis.insa-lyon.fr/rio/vv
- Program: vv
- Module: $RCSfile: vvToolBinarize.cxx,v $
- Language: C++
- Date: $Date: 2010/02/07 12:00:59 $
- Version: $Revision: 1.7 $
- Author : David Sarrut (david.sarrut@creatis.insa-lyon.fr)
+ Authors belong to:
+ - University of LYON http://www.universite-lyon.fr/
+ - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
- Copyright (C) 2008
- Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
- CREATIS-LRMN http://www.creatis.insa-lyon.fr
+ This software is distributed WITHOUT ANY WARRANTY; without even
+ the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the copyright notices for more information.
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation, version 3 of the License.
+ It is distributed under dual licence
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>.
-
- =========================================================================*/
+ - BSD See included LICENSE.txt file
+ - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+======================================================================-====*/
#include "vvToolBinarize.h"
#include "vvSlicerManager.h"
//------------------------------------------------------------------------------
-vvToolBinarize::vvToolBinarize(QWidget * parent, Qt::WindowFlags f)
- :QDialog(parent,f), vvToolBase<vvToolBinarize>(), Ui::vvToolBinarize()
-{
- // Set Modality : dialog is not modal but stay always on top because
- // parent is set at construction
- setModal(false);
- setAttribute(Qt::WA_DeleteOnClose);
+void vvToolBinarize::Initialize() {
+ SetToolName("Binarize");
+ SetToolMenuName("Binarize");
+ SetToolIconFilename(":/common/icons/binarize.png");
+ SetToolTip("Image interactive binarization with thresholds.");
+}
+//------------------------------------------------------------------------------
+
+//------------------------------------------------------------------------------
+vvToolBinarize::vvToolBinarize(vvMainWindowBase * parent, Qt::WindowFlags f)
+ :vvToolWidgetBase(parent,f),
+ vvToolBase<vvToolBinarize>(parent),
+ Ui::vvToolBinarize()
+{
// GUI Initialization
- setupUi(this);
+ Ui_vvToolBinarize::setupUi(mToolWidget);
+ mInteractiveDisplayIsEnabled = mCheckBoxInteractiveDisplay->isChecked();
// Connect signals & slots
- connect(mToolInputSelectionWidget, SIGNAL(accepted()), this, SLOT(InputIsSelected()));
- connect(mToolInputSelectionWidget, SIGNAL(rejected()), this, SLOT(close()));
- connect(buttonBox, SIGNAL(accepted()), this, SLOT(apply()));
- connect(buttonBox, SIGNAL(rejected()), this, SLOT(close()));
- connect(mThresholdSlider1, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT1(double)));
- connect(mThresholdSlider2, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT2(double)));
connect(mRadioButtonLowerThan, SIGNAL(toggled(bool)), this, SLOT(enableLowerThan(bool)));
connect(mCheckBoxUseFG, SIGNAL(toggled(bool)), this, SLOT(useFGBGtoggled(bool)));
connect(mCheckBoxUseBG, SIGNAL(toggled(bool)), this, SLOT(useFGBGtoggled(bool)));
-
- // VTK objects
- //mImageContour = new vvImageContour;
-
- //new vector of contours
+ connect(mCheckBoxInteractiveDisplay, SIGNAL(toggled(bool)), this, SLOT(InteractiveDisplayToggled(bool)));
// Initialize some widget
mThresholdSlider1->SetText("");
mFGSlider->SetText("Foreground value");
mBGSlider->SetText("Background value");
- // Disable main widget while input image is not selected
- toolMainWidget->setEnabled(false);
-
// Main filter
- mFilter = new clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>; //DS PUT IN BASECLASS ?
+ mFilter = new clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>;
- // Initialize the input selection (mFilter should be create before !)
- InitializeListOfInputImages(mToolInputSelectionWidget, mFilter);
+ // Set how many inputs are needed for this tool
+ AddInputSelector("Select one image", mFilter);
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
vvToolBinarize::~vvToolBinarize() {
- //delete mImageContour;
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::InteractiveDisplayToggled(bool b) {
+ mInteractiveDisplayIsEnabled = b;
+ if (!mInteractiveDisplayIsEnabled) {
+ RemoveVTKObjects();
+ }
+ else {
+ for(unsigned int i=0; i<mImageContour.size(); i++) {
+ mImageContour[i]->showActors();
+ if (mRadioButtonLowerThan->isChecked())
+ mImageContourLower[i]->showActors();
+ }
+ if (mCurrentSlicerManager)
+ mCurrentSlicerManager->Render();
+ }
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::RemoveVTKObjects() {
+ for(unsigned int i=0; i<mImageContour.size(); i++) {
+ mImageContour[i]->hideActors();
+ mImageContourLower[i]->hideActors();
+ }
+ if (mCurrentSlicerManager)
+ mCurrentSlicerManager->Render();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+bool vvToolBinarize::close() {
+ RemoveVTKObjects();
+ return vvToolWidgetBase::close();
+}
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolBinarize::reject() {
+ // DD("vvToolBinarize::reject");
+ RemoveVTKObjects();
+ return vvToolWidgetBase::reject();
}
//------------------------------------------------------------------------------
void vvToolBinarize::enableLowerThan(bool b) {
if (!b) {
mThresholdSlider1->resetMaximum();
+ for(unsigned int i=0; i<mImageContour.size(); i++) {
+ mImageContourLower[i]->hideActors();
+ }
+ mCurrentSlicerManager->Render();
}
else {
valueChangedT1(mThresholdSlider1->GetValue());
+ valueChangedT2(mThresholdSlider2->GetValue());
+ for(unsigned int i=0; i<mImageContour.size(); i++) {
+ mImageContourLower[i]->showActors();
+ }
+ mCurrentSlicerManager->Render();
}
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
-void vvToolBinarize::InputIsSelected() {
-
- // Common
- int index = mToolInputSelectionWidget->GetSelectedInputIndex();
- mCurrentSliceManager = mSlicerManagersCompatible[index];
- mCurrentImage = mCurrentSliceManager->GetImage();
- toolMainWidget->setEnabled(true);
+// void vvToolBinarize::InputIsSelected(std::vector<vvSlicerManager *> & m) {
+// DD("vvToolBinarize::InputIsSelected vector in binarize");
+// DD(m.size());
+// }
+void vvToolBinarize::InputIsSelected(vvSlicerManager * m) {
+ mCurrentSlicerManager = m;
// Specific for this gui
mThresholdSlider1->SetValue(0);
mThresholdSlider2->SetImage(mCurrentImage);
mFGSlider->SetImage(mCurrentImage);
mBGSlider->SetImage(mCurrentImage);
- DD(mCurrentSliceManager->GetFileName().c_str());
+ // DD(mCurrentSlicerManager->GetFileName().c_str());
mFGSlider->SetMaximum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMax());
mFGSlider->SetMinimum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMin());
mBGSlider->SetMaximum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMax());
mBGSlider->SetMinimum(mCurrentImage->GetFirstVTKImageData()->GetScalarTypeMin());
mFGSlider->SetValue(1);
mBGSlider->SetValue(0);
+ mFGSlider->SetSingleStep(1);
+ mBGSlider->SetSingleStep(1);
// VTK objects for interactive display
- for(int i=0;i<mCurrentSliceManager->NumberOfSlicers(); i++) {
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
mImageContour.push_back(new vvImageContour);
- mImageContour[i]->setSlicer(mCurrentSliceManager->GetSlicer(i));
+ mImageContour[i]->setSlicer(mCurrentSlicerManager->GetSlicer(i));
+ mImageContour[i]->setColor(1.0, 0.0, 0.0);
+ mImageContourLower.push_back(new vvImageContour);
+ mImageContourLower[i]->setSlicer(mCurrentSlicerManager->GetSlicer(i));
+ mImageContourLower[i]->setColor(0.0, 0.0, 1.0);
}
valueChangedT1(mThresholdSlider1->GetValue());
- connect(mCurrentSliceManager,SIGNAL(UpdateSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
- connect(mCurrentSliceManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
+
+ connect(mThresholdSlider1, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT1(double)));
+ connect(mThresholdSlider2, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT2(double)));
+
+ connect(mCurrentSlicerManager,SIGNAL(UpdateSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
+ connect(mCurrentSlicerManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
void vvToolBinarize::UpdateSlice(int slicer,int slices) {
- DD(slicer);
- for(int i=0;i<mCurrentSliceManager->NumberOfSlicers(); i++) {
+ if (!mInteractiveDisplayIsEnabled) return;
+ if (!mCurrentSlicerManager) close();
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
mImageContour[i]->update(mThresholdSlider1->GetValue());
+ if (mRadioButtonLowerThan->isChecked())
+ mImageContourLower[i]->update(mThresholdSlider2->GetValue());
+
}
- mCurrentSliceManager->Render();
+ mCurrentSlicerManager->Render();
}
//------------------------------------------------------------------------------
DD(good);
*/
+ mArgsInfo.imagetypes_flag = 0;
mArgsInfo.upper_given = 0;
mArgsInfo.lower_given = 0;
bool inverseBGandFG = false;
mArgsInfo.lower_given = 1;
mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
- DD(mArgsInfo.lower_arg);
+ // DD(mArgsInfo.lower_arg);
if (mRadioButtonLowerThan->isChecked()) {
mArgsInfo.upper_given = 1;
mArgsInfo.upper_arg = mThresholdSlider2->GetValue();
mArgsInfo.fg_arg = mFGSlider->GetValue();
mArgsInfo.bg_arg = mBGSlider->GetValue();
- DD(inverseBGandFG);
if (inverseBGandFG) {
mArgsInfo.fg_arg = mFGSlider->GetValue();
mArgsInfo.bg_arg = mBGSlider->GetValue();
}
else mArgsInfo.mode_arg = (char*)"FG";
- mArgsInfo.verbose_flag = true;
+ mArgsInfo.verbose_flag = false;
// Required (even if not used)
mArgsInfo.input_given = 0;
//------------------------------------------------------------------------------
void vvToolBinarize::apply() {
+ if (!mCurrentSlicerManager) close();
+ QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
GetArgsInfoFromGUI();
// Main filter
clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::Pointer filter =
- clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::New();
- filter->SetArgsInfo(mArgsInfo);
+ clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage>::New();
filter->SetInputVVImage(mCurrentImage);
+ filter->SetArgsInfo(mArgsInfo);
+ filter->EnableReadOnDisk(false);
filter->Update();
- // Output ???
+ // Output
vvImage::Pointer output = filter->GetOutputVVImage();
std::ostringstream osstream;
- osstream << "Binarized_" << mCurrentSliceManager->GetSlicer(0)->GetFileName();
- CREATOR(vvToolBinarize)->mMainWindow->AddImage(output,osstream.str());
+ osstream << "Binarized_" << mCurrentSlicerManager->GetSlicer(0)->GetFileName() << ".mhd";
+ AddImage(output,osstream.str());
+ QApplication::restoreOverrideCursor();
close();
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
void vvToolBinarize::valueChangedT2(double v) {
- if (mRadioButtonLowerThan->isChecked()) mThresholdSlider1->SetMaximum(v);
+ // DD("valueChangedT2");
+ if (mRadioButtonLowerThan->isChecked()) {
+ mThresholdSlider1->SetMaximum(v);
+ if (!mInteractiveDisplayIsEnabled) return;
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+ mImageContourLower[i]->update(v);
+ }
+ mCurrentSlicerManager->Render();
+ }
}
//------------------------------------------------------------------------------
//------------------------------------------------------------------------------
void vvToolBinarize::valueChangedT1(double v) {
+ // DD("valueChangedT1");
+ if (!mCurrentSlicerManager) close();
mThresholdSlider2->SetMinimum(v);
- int m1 = (int)lrint(v);
-
- for(int i=0;i<mCurrentSliceManager->NumberOfSlicers(); i++) {
- mImageContour[i]->update(m1);
+ // int m1 = (int)lrint(v);
+ if (!mInteractiveDisplayIsEnabled) return;
+ for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+ mImageContour[i]->update(v);
}
- mCurrentSliceManager->Render();
+ mCurrentSlicerManager->Render();
}
//------------------------------------------------------------------------------
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff