/*=========================================================================
Program: vv http://www.creatis.insa-lyon.fr/rio/vv
- Authors belong to:
+ Authors belong to:
- University of LYON http://www.universite-lyon.fr/
- - Léon Bérard cancer center http://oncora1.lyon.fnclcc.fr
+ - Léon Bérard cancer center http://www.centreleonberard.fr
- CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
This software is distributed WITHOUT ANY WARRANTY; without even
- BSD See included LICENSE.txt file
- CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
+ ===========================================================================**/
+// vv
#include "vvToolResample.h"
#include "vvSlicer.h"
#include "vvToolCreator.h"
+// qt
#include <QFileInfo>
#include <QMessageBox>
+#include <QThread>
#define COLUMN_IMAGE_NAME 7
ADD_TOOL(vvToolResample);
-//====================================================================
-vvToolResample::vvToolResample(vvMainWindowBase * parent, Qt::WindowFlags f):
- vvToolWidgetBase(parent,f),
- vvToolBase<vvToolResample>(parent),
- Ui::vvToolResample()
-{
- Ui_vvToolResample::setupUi(mToolWidget);
-
- mFilter = clitk::ImageResampleGenericFilter::New();
- mLastError ="";
-
- mInputFileFormat = "";
- ComponentType = "";
- mPixelType = "";
- mCurrentSlicerManager=NULL;
-
- mInputSize.resize(0);
- mInputSpacing.resize(0);
- mInputOrigin.resize(0);
- mOutputSize.resize(0);
- mOutputSpacing.resize(0);
-
- xSizeLineEdit->setText("");
- ySizeLineEdit->setText("");
- zSizeLineEdit->setText("");
- xSpacingLineEdit->setText("");
- ySpacingLineEdit->setText("");
- zSpacingLineEdit->setText("");
- scaleSizeLineEdit->setText("");
- scaleSpacingLineEdit->setText("");
-
- sizeRadioButton->setChecked(0);
- scaleSizeRadioButton->setChecked(0);
- isoSizeRadioButton->setChecked(0);
- spacingRadioButton->setChecked(0);
- scaleSpacingRadioButton->setChecked(0);
- isoSpacingRadioButton->setChecked(0);
-
- gaussianFilterCheckBox->setCheckState(Qt::Unchecked);
- xGaussianLineEdit->hide();
- yGaussianLineEdit->hide();
- zGaussianLineEdit->hide();
- gaussianFilterLabel->hide();
+#define SetArgOptionString(OPTION, VALUE) \
+ { \
+ OPTION##_given = VALUE.size(); \
+ OPTION##_arg = new char[VALUE.size()]; \
+ strcpy(OPTION##_arg, VALUE.c_str()); \
+ }
- bSplineLabel->hide();
- bSplineOrderSpinBox->hide();
- bLUTFactorLabel->hide();
- bLUTSpinBox->hide();
- mDimension = -1;
-
- QPalette qPalette;
- qPalette.setColor(QPalette::Foreground, QColor(Qt::blue));
- mInputFormatLabel->setPalette(qPalette);
- mInputDimLabel->setPalette(qPalette);
- mInputPixelTypeLabel->setPalette(qPalette);
- mInputSizeLabel->setPalette(qPalette);
- mInputSpacingLabel->setPalette(qPalette);
-
- // Set how many inputs are needed for this tool
- AddInputSelector("Select an image to resample", mFilter);
-
- // Connect signals & slots
-
- connect(sizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
- connect(scaleSizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
- connect(isoSizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
- connect(spacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
- connect(scaleSpacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
- connect(isoSpacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
-
- connect(xSizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
- connect(ySizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
- connect(zSizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
- connect(xSpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
- connect(ySpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
- connect(zSpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
- connect(scaleSizeLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromScale()));
- connect(scaleSpacingLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromScale()));
- connect(isoSizeLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromIso()));
- connect(isoSpacingLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromIso()));
-
- connect(gaussianFilterCheckBox,SIGNAL(stateChanged(int)),this,SLOT(UpdateGaussianFilter()));
- connect(interpolationComboBox,SIGNAL(currentIndexChanged(QString)),this,SLOT(UpdateInterpolation()));
+//------------------------------------------------------------------------------
+vvToolResample::vvToolResample(vvMainWindowBase * parent, Qt::WindowFlags f):
+ vvToolWidgetBase(parent,f),
+ vvToolBase<vvToolResample>(parent),
+ Ui::vvToolResample()
+{
+ Ui_vvToolResample::setupUi(mToolWidget);
+
+ mFilter = clitk::ResampleImageGenericFilter::New();
+ //mFilter = clitk::ImageResampleGenericFilter::New();
+ mLastError ="";
+
+ mInputFileFormat = "";
+ ComponentType = "";
+ mPixelType = "";
+ mCurrentSlicerManager=NULL;
+
+ mInputSize.resize(0);
+ mInputSpacing.resize(0);
+ mInputOrigin.resize(0);
+ mOutputSize.resize(0);
+ mOutputSpacing.resize(0);
+
+ xSizeLineEdit->setText("");
+ ySizeLineEdit->setText("");
+ zSizeLineEdit->setText("");
+ xSpacingLineEdit->setText("");
+ ySpacingLineEdit->setText("");
+ zSpacingLineEdit->setText("");
+ scaleSizeLineEdit->setText("");
+ scaleSpacingLineEdit->setText("");
+
+ sizeRadioButton->setChecked(0);
+ scaleSizeRadioButton->setChecked(0);
+ isoSizeRadioButton->setChecked(0);
+ spacingRadioButton->setChecked(0);
+ scaleSpacingRadioButton->setChecked(0);
+ isoSpacingRadioButton->setChecked(0);
+
+ gaussianFilterCheckBox->setCheckState(Qt::Unchecked);
+
+ xGaussianLineEdit->hide();
+ yGaussianLineEdit->hide();
+ zGaussianLineEdit->hide();
+ gaussianFilterLabel->hide();
+
+ bSplineLabel->hide();
+ bSplineOrderSpinBox->hide();
+ bLUTFactorLabel->hide();
+ bLUTSpinBox->hide();
+ mDimension = -1;
+
+ QPalette qPalette;
+ qPalette.setColor(QPalette::Foreground, QColor(Qt::blue));
+ mInputFormatLabel->setPalette(qPalette);
+ mInputDimLabel->setPalette(qPalette);
+ mInputPixelTypeLabel->setPalette(qPalette);
+ mInputSizeLabel->setPalette(qPalette);
+ mInputSpacingLabel->setPalette(qPalette);
+
+ // Set how many inputs are needed for this tool
+ AddInputSelector("Select an image to resample", mFilter);
+
+ // Connect signals & slots
+
+ connect(sizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+ connect(scaleSizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+ connect(isoSizeRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+ connect(spacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+ connect(scaleSpacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+ connect(isoSpacingRadioButton, SIGNAL(clicked()), this, SLOT(UpdateControlSizeAndSpacing()));
+
+ connect(xSizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
+ connect(ySizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
+ connect(zSizeLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromSize()));
+ connect(xSpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
+ connect(ySpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
+ connect(zSpacingLineEdit, SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromSpacing()));
+ connect(scaleSizeLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromScale()));
+ connect(scaleSpacingLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromScale()));
+ connect(isoSizeLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSizeFromIso()));
+ connect(isoSpacingLineEdit,SIGNAL(textEdited(QString)),this,SLOT(ComputeNewSpacingFromIso()));
+
+ connect(gaussianFilterCheckBox,SIGNAL(stateChanged(int)),this,SLOT(UpdateGaussianFilter()));
+ connect(interpolationComboBox,SIGNAL(currentIndexChanged(QString)),this,SLOT(UpdateInterpolation()));
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::Initialize() {
+
+//------------------------------------------------------------------------------
+void vvToolResample::Initialize()
+{
SetToolName("Resample Image");
SetToolMenuName("Resample");
SetToolIconFilename(":/common/icons/resample.png");
SetToolTip("Resample image with various interpolation methods.");
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::InputIsSelected(vvSlicerManager* m) {
-
- mCurrentSlicerManager = m;
- mCurrentImage = mCurrentSlicerManager->GetSlicer(0)->GetImage();
- if (mCurrentImage.IsNull()) return;
- mInputFileName = mCurrentSlicerManager->GetFileName().c_str();
-
- // Set current information
- mPixelType = mCurrentImage->GetScalarTypeAsString().c_str();
- //ds ComponentType = mCurrentImageGetNumberOfScalarComponents();
- mDimension = mCurrentImage->GetNumberOfDimensions();
-
- // Copy size, spacing ...
- mInputOrigin.resize(mDimension);
- mInputSpacing.resize(mDimension);
- mInputSize.resize(mDimension);
- for (int i = 0; i < mDimension;i++) {
- mInputOrigin[i] = mCurrentImage->GetOrigin()[i];
- mInputSpacing[i] = mCurrentImage->GetSpacing()[i];
- mInputSize[i] = mCurrentImage->GetSize()[i];
- }
+//------------------------------------------------------------------------------
- // Get file format
- mInputFileFormat = itksys::SystemTools::GetFilenameLastExtension(mInputFileName.toStdString()).c_str();
-
- // Display infos
- mInputFormatLabel->setText(mInputFileFormat);
- mInputSizeLabel->setText(GetVectorIntAsString(mInputSize));
- mInputDimLabel->setText(QString::number(mDimension)+"D");
- mInputSpacingLabel->setText(GetVectorDoubleAsString(mInputSpacing));
- mInputPixelTypeLabel->setText(mPixelType);
- mInputMemoryLabel->setText(GetSizeInBytes(mInputSize));
-
- // Set current size
- scaleSizeRadioButton->setChecked(true);
- UpdateControlSizeAndSpacing();
- scaleSizeLineEdit->setText("100");
- ComputeNewSizeFromScale();
-
- // Update output
- UpdateOutputInfo();
-}
-//====================================================================
-//====================================================================
-void vvToolResample::UpdateOutputInfo() {
- mOutputSizeLabel->setText(GetVectorIntAsString(mOutputSize));
- mOutputSpacingLabel->setText(GetVectorDoubleAsString(mOutputSpacing));
- mOutputMemoryLabel->setText(GetSizeInBytes(mOutputSize));
+//------------------------------------------------------------------------------
+void vvToolResample::InputIsSelected(vvSlicerManager* m)
+{
+
+ mCurrentSlicerManager = m;
+ mCurrentImage = mCurrentSlicerManager->GetSlicer(0)->GetImage();
+ if (mCurrentImage.IsNull()) return;
+ mInputFileName = mCurrentSlicerManager->GetFileName().c_str();
+
+ // Set current information
+ mPixelType = mCurrentImage->GetScalarTypeAsITKString().c_str();
+ //ds ComponentType = mCurrentImageGetNumberOfScalarComponents();
+ mDimension = mCurrentImage->GetNumberOfDimensions();
+
+ // Copy size, spacing ...
+ mInputOrigin.resize(mDimension);
+ mInputSpacing.resize(mDimension);
+ mInputSize.resize(mDimension);
+ for (int i = 0; i < mDimension; i++) {
+ mInputOrigin[i] = mCurrentImage->GetOrigin()[i];
+ mInputSpacing[i] = mCurrentImage->GetSpacing()[i];
+ mInputSize[i] = mCurrentImage->GetSize()[i];
+ }
+
+ // Get file format
+ mInputFileFormat = itksys::SystemTools::GetFilenameLastExtension(mInputFileName.toStdString()).c_str();
+
+ // Display infos
+ mInputFormatLabel->setText(mInputFileFormat);
+ mInputSizeLabel->setText(GetVectorIntAsString(mInputSize));
+ mInputDimLabel->setText(QString::number(mDimension)+"D");
+ mInputSpacingLabel->setText(GetVectorDoubleAsString(mInputSpacing));
+ mInputPixelTypeLabel->setText(mPixelType);
+ mInputMemoryLabel->setText(GetSizeInBytes(mInputSize));
+
+ // Set current size
+ scaleSizeRadioButton->setChecked(true);
+ UpdateControlSizeAndSpacing();
+ scaleSizeLineEdit->setText("100");
+ ComputeNewSizeFromScale();
+
+ // Update output
+ UpdateOutputInfo();
}
-//====================================================================
-
-//====================================================================
-QString vvToolResample::GetSizeInBytes(std::vector<int> & size) {
- int t = 1;
- for (unsigned int i=0; i<size.size(); i++) t *= size[i];
- t *= mCurrentImage->GetScalarSize()*mCurrentImage->GetNumberOfScalarComponents();
- QString result = QString::number(t);
- result += " bytes (";
- if (t > 1000000000) {
- t /= 1000000000;
- result += QString::number(t);
- result += " GB)";
- }
- else if (t > 1000000) {
- t /= 1000000;
- result += QString::number(t);
- result += " MB)";
- }
- else if (t > 1000) {
- t /= 1000;
- result += QString::number(t);
- result += " KB)";
- }
- return result;
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::UpdateOutputInfo()
+{
+ mOutputSizeLabel->setText(GetVectorIntAsString(mOutputSize));
+ mOutputSpacingLabel->setText(GetVectorDoubleAsString(mOutputSpacing));
+ mOutputMemoryLabel->setText(GetSizeInBytes(mOutputSize));
}
-//====================================================================
-
-//====================================================================
-QString vvToolResample::GetVectorDoubleAsString(std::vector<double> vectorDouble) {
- QString result;
- for (unsigned int i= 0; i<vectorDouble.size(); i++) {
- if (i != 0)
- result += " x ";
- result += QString::number(vectorDouble[i]);
- }
- return result;
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+QString vvToolResample::GetSizeInBytes(std::vector<int> & size)
+{
+ int t = 1;
+ for (unsigned int i=0; i<size.size(); i++) t *= size[i];
+ t *= mCurrentImage->GetScalarSize()*mCurrentImage->GetNumberOfScalarComponents();
+ QString result = QString::number(t);
+ result += " bytes (";
+ if (t > 1000000000) {
+ t /= 1000000000;
+ result += QString::number(t);
+ result += " GB)";
+ } else if (t > 1000000) {
+ t /= 1000000;
+ result += QString::number(t);
+ result += " MB)";
+ } else if (t > 1000) {
+ t /= 1000;
+ result += QString::number(t);
+ result += " KB)";
+ } else result += ")";
+ return result;
}
-//====================================================================
-
-//====================================================================
-QString vvToolResample::GetVectorIntAsString(std::vector<int> vectorInt) {
- QString result;
- for (unsigned int i= 0; i<vectorInt.size(); i++) {
- if (i != 0)
- result += " x ";
- result += QString::number(vectorInt[i]);
- }
- return result;
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+QString vvToolResample::GetVectorDoubleAsString(std::vector<double> vectorDouble)
+{
+ QString result;
+ for (unsigned int i= 0; i<vectorDouble.size(); i++) {
+ if (i != 0)
+ result += " x ";
+ result += QString::number(vectorDouble[i]);
+ }
+ return result;
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::FillSizeEdit(std::vector<int> size) {
- xSizeLineEdit->setText(QString::number(size[0]));
- ySizeLineEdit->setText(QString::number(size[1]));
- if (size.size() > 2)
- zSizeLineEdit->setText(QString::number(size[2]));
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+QString vvToolResample::GetVectorIntAsString(std::vector<int> vectorInt)
+{
+ QString result;
+ for (unsigned int i= 0; i<vectorInt.size(); i++) {
+ if (i != 0)
+ result += " x ";
+ result += QString::number(vectorInt[i]);
+ }
+ return result;
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::FillSpacingEdit(std::vector<double> spacing) {
- xSpacingLineEdit->setText(QString::number(spacing[0]));
- ySpacingLineEdit->setText(QString::number(spacing[1]));
- if (spacing.size() > 2)
- zSpacingLineEdit->setText(QString::number(spacing[2]));
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::FillSizeEdit(std::vector<int> size)
+{
+ xSizeLineEdit->setText(QString::number(size[0]));
+ ySizeLineEdit->setText(QString::number(size[1]));
+ if (size.size() > 2)
+ zSizeLineEdit->setText(QString::number(size[2]));
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::UpdateOutputSizeAndSpacing() {
- mOutputSize.resize(mDimension);
- mOutputSize = mInputSize;
- mOutputSpacing.resize(mDimension);
- mOutputSpacing = mInputSpacing;
- mOutputSize[0] = (int)xSizeLineEdit->text().toDouble();
- mOutputSize[1] = (int)ySizeLineEdit->text().toDouble();
- if (mDimension > 2)
- mOutputSize[2] = (int)zSizeLineEdit->text().toDouble();
+//------------------------------------------------------------------------------
- mOutputSpacing[0] = xSpacingLineEdit->text().toDouble();
- mOutputSpacing[1] = ySpacingLineEdit->text().toDouble();
- if (mDimension > 2)
- mOutputSpacing[2] = zSpacingLineEdit->text().toDouble();
- UpdateOutputInfo();
+//------------------------------------------------------------------------------
+void vvToolResample::FillSpacingEdit(std::vector<double> spacing)
+{
+ xSpacingLineEdit->setText(QString::number(spacing[0]));
+ ySpacingLineEdit->setText(QString::number(spacing[1]));
+ if (spacing.size() > 2)
+ zSpacingLineEdit->setText(QString::number(spacing[2]));
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::UpdateControlSizeAndSpacing() {
- scaleSizeLineEdit->setText("");
- scaleSpacingLineEdit->setText("");
- isoSizeLineEdit->setText("");
- isoSpacingLineEdit->setText("");
-
- xSizeLineEdit->setReadOnly(1);
- ySizeLineEdit->setReadOnly(1);
- zSizeLineEdit->setReadOnly(1);
- scaleSizeLineEdit->setReadOnly(1);
- isoSizeLineEdit->setReadOnly(1);
-
- xSpacingLineEdit->setReadOnly(1);
- ySpacingLineEdit->setReadOnly(1);
- zSpacingLineEdit->setReadOnly(1);
- scaleSpacingLineEdit->setReadOnly(1);
- isoSpacingLineEdit->setReadOnly(1);
-
- if (sizeRadioButton->isChecked()) {
- xSizeLineEdit->setReadOnly(0);
- ySizeLineEdit->setReadOnly(0);
- if (mDimension > 2)
- zSizeLineEdit->setReadOnly(0);
- }
- else {
- if (spacingRadioButton->isChecked()) {
- xSpacingLineEdit->setReadOnly(0);
- ySpacingLineEdit->setReadOnly(0);
- if (mDimension > 2)
- zSpacingLineEdit->setReadOnly(0);
- }
- else if (scaleSizeRadioButton->isChecked())
- scaleSizeLineEdit->setReadOnly(0);
- else if (scaleSpacingRadioButton->isChecked())
- scaleSpacingLineEdit->setReadOnly(0);
- else if (isoSizeRadioButton->isChecked())
- isoSizeLineEdit->setReadOnly(0);
- else if (isoSpacingRadioButton->isChecked())
- isoSpacingLineEdit->setReadOnly(0);
- }
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::UpdateOutputSizeAndSpacing()
+{
+ mOutputSize.resize(mDimension);
+ mOutputSize = mInputSize;
+ mOutputSpacing.resize(mDimension);
+ mOutputSpacing = mInputSpacing;
+ mOutputSize[0] = (int)xSizeLineEdit->text().toDouble();
+ mOutputSize[1] = (int)ySizeLineEdit->text().toDouble();
+ if (mDimension > 2)
+ mOutputSize[2] = (int)zSizeLineEdit->text().toDouble();
+
+ mOutputSpacing[0] = xSpacingLineEdit->text().toDouble();
+ mOutputSpacing[1] = ySpacingLineEdit->text().toDouble();
+ if (mDimension > 2)
+ mOutputSpacing[2] = zSpacingLineEdit->text().toDouble();
+
+ UpdateOutputInfo();
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::ComputeNewSpacingFromSize() {
- double newSpacing = mInputSpacing[0]*mInputSize[0];
- xSpacingLineEdit->setText(QString::number(newSpacing/xSizeLineEdit->text().toDouble()));
- newSpacing = mInputSpacing[1]*mInputSize[1];
- ySpacingLineEdit->setText(QString::number(newSpacing/ySizeLineEdit->text().toDouble()));
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::UpdateControlSizeAndSpacing()
+{
+ scaleSizeLineEdit->setText("");
+ scaleSpacingLineEdit->setText("");
+ isoSizeLineEdit->setText("");
+ isoSpacingLineEdit->setText("");
+
+ xSizeLineEdit->setReadOnly(1);
+ ySizeLineEdit->setReadOnly(1);
+ zSizeLineEdit->setReadOnly(1);
+ scaleSizeLineEdit->setReadOnly(1);
+ isoSizeLineEdit->setReadOnly(1);
+
+ xSpacingLineEdit->setReadOnly(1);
+ ySpacingLineEdit->setReadOnly(1);
+ zSpacingLineEdit->setReadOnly(1);
+ scaleSpacingLineEdit->setReadOnly(1);
+ isoSpacingLineEdit->setReadOnly(1);
+
+ if (sizeRadioButton->isChecked()) {
+ xSizeLineEdit->setReadOnly(0);
+ ySizeLineEdit->setReadOnly(0);
if (mDimension > 2)
- {
- newSpacing = mInputSpacing[2]*mInputSize[2];
- zSpacingLineEdit->setText(QString::number(newSpacing/zSizeLineEdit->text().toDouble()));
- }
- UpdateOutputSizeAndSpacing();
+ zSizeLineEdit->setReadOnly(0);
+ } else {
+ if (spacingRadioButton->isChecked()) {
+ xSpacingLineEdit->setReadOnly(0);
+ ySpacingLineEdit->setReadOnly(0);
+ if (mDimension > 2)
+ zSpacingLineEdit->setReadOnly(0);
+ } else if (scaleSizeRadioButton->isChecked())
+ scaleSizeLineEdit->setReadOnly(0);
+ else if (scaleSpacingRadioButton->isChecked())
+ scaleSpacingLineEdit->setReadOnly(0);
+ else if (isoSizeRadioButton->isChecked())
+ isoSizeLineEdit->setReadOnly(0);
+ else if (isoSpacingRadioButton->isChecked())
+ isoSpacingLineEdit->setReadOnly(0);
+ }
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::ComputeNewSizeFromSpacing() {
- double newSize = mInputSpacing[0]*mInputSize[0];
- xSizeLineEdit->setText(QString::number(newSize/xSpacingLineEdit->text().toDouble()));
- newSize = mInputSpacing[1]*mInputSize[1];
- ySizeLineEdit->setText(QString::number(newSize/ySpacingLineEdit->text().toDouble()));
- if (mDimension > 2)
- {
- newSize = mInputSpacing[2]*mInputSize[2];
- zSizeLineEdit->setText(QString::number(newSize/zSpacingLineEdit->text().toDouble()));
- }
- UpdateOutputSizeAndSpacing();
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSpacingFromSize()
+{
+ double newSpacing = mInputSpacing[0]*mInputSize[0];
+ xSpacingLineEdit->setText(QString::number(newSpacing/xSizeLineEdit->text().toDouble()));
+ newSpacing = mInputSpacing[1]*mInputSize[1];
+ ySpacingLineEdit->setText(QString::number(newSpacing/ySizeLineEdit->text().toDouble()));
+ if (mDimension > 2) {
+ newSpacing = mInputSpacing[2]*mInputSize[2];
+ zSpacingLineEdit->setText(QString::number(newSpacing/zSizeLineEdit->text().toDouble()));
+ }
+ UpdateOutputSizeAndSpacing();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::ComputeNewSpacingFromScale() {
- xSpacingLineEdit->setText(QString::number(mInputSpacing[0]*scaleSpacingLineEdit->text().toDouble()/100));
- ySpacingLineEdit->setText(QString::number(mInputSpacing[1]*scaleSpacingLineEdit->text().toDouble()/100));
- if (mDimension > 2)
- zSpacingLineEdit->setText(QString::number(mInputSpacing[2]*scaleSpacingLineEdit->text().toDouble()/100));
- ComputeNewSizeFromSpacing();
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSizeFromSpacing()
+{
+ double newSize = mInputSpacing[0]*mInputSize[0];
+ xSizeLineEdit->setText(QString::number(newSize/xSpacingLineEdit->text().toDouble()));
+ newSize = mInputSpacing[1]*mInputSize[1];
+ ySizeLineEdit->setText(QString::number(newSize/ySpacingLineEdit->text().toDouble()));
+ if (mDimension > 2) {
+ newSize = mInputSpacing[2]*mInputSize[2];
+ zSizeLineEdit->setText(QString::number(newSize/zSpacingLineEdit->text().toDouble()));
+ }
+ UpdateOutputSizeAndSpacing();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::ComputeNewSizeFromScale() {
- xSizeLineEdit->setText(QString::number(mInputSize[0]*scaleSizeLineEdit->text().toDouble()/100));
- ySizeLineEdit->setText(QString::number(mInputSize[1]*scaleSizeLineEdit->text().toDouble()/100));
- if (mDimension > 2)
- zSizeLineEdit->setText(QString::number(mInputSize[2]*scaleSizeLineEdit->text().toDouble()/100));
- ComputeNewSpacingFromSize();
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSpacingFromScale()
+{
+ xSpacingLineEdit->setText(QString::number(mInputSpacing[0]*scaleSpacingLineEdit->text().toDouble()/100));
+ ySpacingLineEdit->setText(QString::number(mInputSpacing[1]*scaleSpacingLineEdit->text().toDouble()/100));
+ if (mDimension > 2)
+ zSpacingLineEdit->setText(QString::number(mInputSpacing[2]*scaleSpacingLineEdit->text().toDouble()/100));
+ ComputeNewSizeFromSpacing();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::ComputeNewSpacingFromIso() {
- xSpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
- ySpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
- if (mDimension > 2)
- zSpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
- ComputeNewSizeFromSpacing();
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSizeFromScale()
+{
+ xSizeLineEdit->setText(QString::number(mInputSize[0]*scaleSizeLineEdit->text().toDouble()/100));
+ ySizeLineEdit->setText(QString::number(mInputSize[1]*scaleSizeLineEdit->text().toDouble()/100));
+ if (mDimension > 2)
+ zSizeLineEdit->setText(QString::number(mInputSize[2]*scaleSizeLineEdit->text().toDouble()/100));
+ ComputeNewSpacingFromSize();
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::ComputeNewSizeFromIso() {
- xSizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
- ySizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
- if (mDimension > 2)
- zSizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
- ComputeNewSpacingFromSize();
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSpacingFromIso()
+{
+ xSpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
+ ySpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
+ if (mDimension > 2)
+ zSpacingLineEdit->setText(QString::number(isoSpacingLineEdit->text().toDouble()));
+ ComputeNewSizeFromSpacing();
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::UpdateInterpolation() {
- if (interpolationComboBox->currentText() == "BSpline") {
- bSplineLabel->show();
- bSplineOrderSpinBox->show();
- bLUTFactorLabel->hide();
- bLUTSpinBox->hide();
- }
- else if (interpolationComboBox->currentText() == "Blut (faster BSpline)") {
- bSplineLabel->show();
- bSplineOrderSpinBox->show();
- bLUTFactorLabel->show();
- bLUTSpinBox->show();
- }
- else {
- bSplineLabel->hide();
- bSplineOrderSpinBox->hide();
- bLUTFactorLabel->hide();
- bLUTSpinBox->hide();
- }
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::ComputeNewSizeFromIso()
+{
+ xSizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
+ ySizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
+ if (mDimension > 2)
+ zSizeLineEdit->setText(QString::number(isoSizeLineEdit->text().toDouble()));
+ ComputeNewSpacingFromSize();
}
-//====================================================================
-
-//====================================================================
-void vvToolResample::UpdateGaussianFilter() {
- if (gaussianFilterCheckBox->isChecked()) {
- gaussianFilterLabel->show();
- xGaussianLineEdit->show();
- yGaussianLineEdit->show();
- if (mDimension > 2)
- zGaussianLineEdit->show();
- }
- else {
- gaussianFilterLabel->hide();
- xGaussianLineEdit->hide();
- yGaussianLineEdit->hide();
- zGaussianLineEdit->hide();
- }
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
+void vvToolResample::UpdateInterpolation()
+{
+ if (interpolationComboBox->currentText() == "BSpline") {
+ bSplineLabel->show();
+ bSplineOrderSpinBox->show();
+ bLUTFactorLabel->hide();
+ bLUTSpinBox->hide();
+ } else if (interpolationComboBox->currentText() == "Blut (faster BSpline)") {
+ bSplineLabel->show();
+ bSplineOrderSpinBox->show();
+ bLUTFactorLabel->show();
+ bLUTSpinBox->show();
+ } else {
+ bSplineLabel->hide();
+ bSplineOrderSpinBox->hide();
+ bLUTFactorLabel->hide();
+ bLUTSpinBox->hide();
+ }
}
-//====================================================================
+//------------------------------------------------------------------------------
-//====================================================================
-void vvToolResample::apply() {
+//------------------------------------------------------------------------------
+void vvToolResample::UpdateGaussianFilter()
+{
+ if (gaussianFilterCheckBox->isChecked()) {
+ gaussianFilterLabel->show();
+ xGaussianLineEdit->show();
+ yGaussianLineEdit->show();
+ if (mDimension > 2)
+ zGaussianLineEdit->show();
+ } else {
+ gaussianFilterLabel->hide();
+ xGaussianLineEdit->hide();
+ yGaussianLineEdit->hide();
+ zGaussianLineEdit->hide();
+ }
+}
+//------------------------------------------------------------------------------
- // Get resampler options
- std::vector<double> sigma;
- sigma.push_back(xGaussianLineEdit->text().toDouble());
- sigma.push_back(yGaussianLineEdit->text().toDouble());
- if (mDimension > 2) sigma.push_back(zGaussianLineEdit->text().toDouble());
- mFilter->SetOutputSize(mOutputSize);
- mFilter->SetOutputSpacing(mOutputSpacing);
- mFilter->SetInterpolationName(interpolationComboBox->currentText().toLower().toStdString());
+//------------------------------------------------------------------------------
+void vvToolResample::apply()
+{
- if (interpolationComboBox->currentText() == "BSpline")
- mFilter->SetBSplineOrder(bSplineOrderSpinBox->value());
- else if (interpolationComboBox->currentText() == "Blut (faster BSpline)") {
- mFilter->SetInterpolationName("blut");
- mFilter->SetBSplineOrder(bSplineOrderSpinBox->value());
- mFilter->SetBLUTSampling(bLUTSpinBox->value());
+ // Get resampler options
+ std::vector<double> sigma;
+ sigma.push_back(xGaussianLineEdit->text().toDouble());
+ sigma.push_back(yGaussianLineEdit->text().toDouble());
+ if (mDimension > 2) sigma.push_back(zGaussianLineEdit->text().toDouble());
+ if (mDimension == 4) sigma.push_back(0.01); //FIXME Don't filter along the temporal direction
+
+ // Build ArgsInfo
+ clitk::ResampleImageGenericFilter::ArgsInfoType mArgsInfo;
+
+ // Initialisation to default
+ cmdline_parser_clitkResampleImage_init(&mArgsInfo);
+ mArgsInfo.input_given = 0;
+ mArgsInfo.output_given = 0;
+
+ // Size and spacing options
+ mArgsInfo.size_given = mDimension;
+ mArgsInfo.spacing_given = mDimension;
+ mArgsInfo.size_arg = new int[mDimension];
+ mArgsInfo.spacing_arg = new float[mDimension];
+ for(int i=0; i<mDimension; i++) {
+ mArgsInfo.size_arg[i] = mOutputSize[i];
+ mArgsInfo.spacing_arg[i] = mOutputSpacing[i];
+ }
+
+ if (sizeRadioButton->isChecked() ||
+ scaleSizeRadioButton->isChecked() ||
+ isoSizeRadioButton->isChecked()) {
+ mArgsInfo.spacing_given=0;
+ }
+ if (spacingRadioButton->isChecked() ||
+ scaleSpacingRadioButton->isChecked() ||
+ isoSpacingRadioButton->isChecked()) {
+ mArgsInfo.size_given=0;
+ }
+
+ // Interpolation options
+ std::string interp = interpolationComboBox->currentText().toLower().toStdString();
+ if (interp == "nn") SetArgOptionString(mArgsInfo.interp, std::string("nn"));
+ if (interp == "linear") SetArgOptionString(mArgsInfo.interp, std::string("linear"));
+ if (interp == "bspline") SetArgOptionString(mArgsInfo.interp, std::string("bspline"));
+ if (interp == "blut (faster bspline)") SetArgOptionString(mArgsInfo.interp, std::string("blut"));
+ if (interp == "windowed sinc") SetArgOptionString(mArgsInfo.interp, std::string("windowed sinc"));
+
+ if (interp == "bspline") {
+ mArgsInfo.order_arg = bSplineOrderSpinBox->value();
+ }
+ else {
+ if (interp == "blut (faster bspline)") {
+ mArgsInfo.order_arg = bSplineOrderSpinBox->value();
+ mArgsInfo.sampling_arg = bLUTSpinBox->value();
+ }
+ }
+
+ // Gauss
+ if (gaussianFilterCheckBox->isChecked()) {
+ mArgsInfo.gauss_given = mDimension;
+ mArgsInfo.gauss_arg = new float[mDimension];
+ for(int i=0; i<mDimension; i++) {
+ mArgsInfo.gauss_arg[i] = sigma[i];
}
- if (gaussianFilterCheckBox->isChecked())
- mFilter->SetGaussianSigma(sigma);
- // mFilter->SetOutputFileName(OutputFileName.toStdString());
- mFilter->SetDefaultPixelValue(defaultPixelValueLineEdit->text().toDouble());
- mFilter->SetInputVVImage(mCurrentImage);
-
- // Go !
- mFilter->Update();
- mOutput = mFilter->GetOutputVVImage();
- AddImage(mOutput,GetOutputFileName());
- close();
+ }
+ mArgsInfo.default_arg = defaultPixelValueLineEdit->text().toDouble();
+
+ // Thread
+ mArgsInfo.thread_arg = QThread::idealThreadCount();
+ mArgsInfo.thread_given = 1;
+
+ // Set options to filter
+ mFilter->SetArgsInfo(mArgsInfo);
+ mFilter->SetInputVVImage(mCurrentImage);
+
+ // Go !
+ mFilter->Update();
+ mOutput = mFilter->GetOutputVVImage();
+ mOutput->GetTransform()[0]->SetMatrix(mCurrentSlicerManager->GetSlicer(0)->GetConcatenatedTransform()->GetMatrix());
+ AddImage(mOutput,GetOutputFileName());
+ close();
}
-//====================================================================
+//------------------------------------------------------------------------------
+
+
+//------------------------------------------------------------------------------
std::string vvToolResample::GetOutputFileName()
{
- QFileInfo info(QString(mCurrentSlicerManager->GetFileName().c_str()));
- return (info.path().toStdString() + "/resampled_" + info.fileName().toStdString());
+ QFileInfo info(QString(mCurrentSlicerManager->GetFileName().c_str()));
+ return (info.path().toStdString() + "/resampled_" + info.fileName().toStdString());
}
+//------------------------------------------------------------------------------
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff