X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;ds=sidebyside;f=common%2FCMakeLists.txt;h=a85fda611b1054e0dcfe74ece18ce22c4fd13ebd;hb=138d9b4ae5336543a9afc3b391b30f8398be3421;hp=a4b26142178a03624a610e44498a6b4646148348;hpb=62c08c838c8d824b37b908bbed67b996aaaa31ac;p=clitk.git

diff --git a/common/CMakeLists.txt b/common/CMakeLists.txt
index a4b2614..a85fda6 100644
--- a/common/CMakeLists.txt
+++ b/common/CMakeLists.txt
@@ -1,7 +1,3 @@
-#=========================================================
-INCLUDE(${PROJECT_SOURCE_DIR}/cmake/common.cmake)
-#=========================================================
-
 #=========================================================
 # make clitk libraries*
 CONFIGURE_FILE(clitkConfiguration.h.in ${PROJECT_BINARY_DIR}/clitkConfiguration.h)
@@ -13,6 +9,8 @@ SET(clitkCommon_SRC
   clitkImageCommon.cxx
   clitkTransformUtilities.cxx
   clitkIO.cxx
+  clitkGateAsciiImageIO.cxx
+  clitkGateAsciiImageIOFactory.cxx
   clitkVoxImageIO.cxx  
   clitkVoxImageIOFactory.cxx
   clitkVfImageIO.cxx  
@@ -22,43 +20,65 @@ SET(clitkCommon_SRC
   clitkXdrImageIOReader.cxx  
   clitkXdrImageIOWriter.cxx  
   clitkXdrImageIOFactory.cxx
-  clitkHndImageIO.cxx
-  clitkHndImageIOFactory.cxx
+  rtkHndImageIO.cxx
+  rtkHndImageIOFactory.cxx
   clitkDicomRTDoseIO.cxx
   clitkDicomRTDoseIOFactory.cxx
   clitkOrientation.cxx
-  vvImage.cxx
   clitkImageToImageGenericFilterBase.cxx
   clitkExceptionObject.cxx
   clitkFilterBase.cxx
-)  
-
-### if LIBSTATGRAB is installed, add clitkMemoryUsage.cxx in the library
-IF(CLITK_MEMORY_INFO)
-  FIND_PROGRAM(LIBSTATGRAB NAMES statgrab PATHS)
-  IF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
-    MESSAGE( FATAL_ERROR "libstatgrab NOT FOUND -> please install http://www.i-scream.org/libstatgrab/")
-  ELSE (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
-    SET(clitkCommon_SRC ${clitkCommon_SRC} clitkMemoryUsage.cxx)
-  ENDIF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")  
-ENDIF(CLITK_MEMORY_INFO)
+  clitkMemoryUsage.cxx
+  vvImage.cxx
+  vvImageReader.cxx
+  vvImageWriter.cxx
+)
+IF(CLITK_PRIVATE_FEATURES)
+  SET(clitkCommon_SRC ${clitkCommon_SRC}
+    ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIO.cxx
+    ${PROJECT_SOURCE_DIR}/private_features/clitkUsfImageIOFactory.cxx
+    ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIO.cxx
+    ${PROJECT_SOURCE_DIR}/private_features/clitkUSVoxImageIOFactory.cxx
+    ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIO.cxx
+    ${PROJECT_SOURCE_DIR}/private_features/clitkSvlImageIOFactory.cxx
+    )
+ENDIF(CLITK_PRIVATE_FEATURES)
 
 ### Declare clitkCommon library
 ADD_LIBRARY(clitkCommon STATIC ${clitkCommon_SRC})
 
-### Add libstatgrab if needed
-IF(CLITK_MEMORY_INFO)
-    TARGET_LINK_LIBRARIES(clitkCommon statgrab)
-ENDIF(CLITK_MEMORY_INFO)
+IF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+  TARGET_LINK_LIBRARIES(clitkCommon statgrab)
+ENDIF(NOT ${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
+
+### Check if ITK was compiled with SYSTEM_GDCM = ON and set the gdcm libraries accordingly
+SET(CLITK_USE_SYSTEM_GDCM FALSE)
+IF(ITK_VERSION_MAJOR LESS "4")
+  IF(ITK_USE_SYSTEM_GDCM)
+    SET(CLITK_USE_SYSTEM_GDCM TRUE) 
+  ENDIF(ITK_USE_SYSTEM_GDCM)
+ELSE(ITK_VERSION_MAJOR LESS "4")
+  SET(GDCM_INCLUDE ".*include/gdcm-.*")
+  IF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE})
+    SET(CLITK_USE_SYSTEM_GDCM TRUE)
+  ENDIF(ITKGDCM_INCLUDE_DIRS MATCHES ${GDCM_INCLUDE})
+ENDIF(ITK_VERSION_MAJOR LESS "4")
+
+IF(CLITK_USE_SYSTEM_GDCM)
+  SET(CLITK_GDCM_LIBRARIES gdcmDSED) 
+ENDIF(CLITK_USE_SYSTEM_GDCM)
 
-TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging vtkHybrid ITKBasicFilters)
+TARGET_LINK_LIBRARIES(clitkCommon vtkCommon vtkImaging ${ITK_LIBRARIES} ${CLITK_GDCM_LIBRARIES})
 
 ADD_LIBRARY(clitkDicomRTStruct STATIC
   clitkDicomRT_Contour.cxx
   clitkDicomRT_ROI.cxx
   clitkDicomRT_StructureSet.cxx
-  clitkDicomRT_ROI_ConvertToImageFilter.cxx
+  clitkDicomRTStruct2ImageFilter.cxx
 )
 
+TARGET_LINK_LIBRARIES(clitkDicomRTStruct vtkHybrid ${CLITK_GDCM_LIBRARIES}) 
+
 #ADD_LIBRARY(clitkCommonShared SHARED ${clitkCommon_SRC})
 #SET_TARGET_PROPERTIES(clitkCommonShared PROPERTIES COMPILE_FLAGS -fPIC)
+