X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;ds=sidebyside;f=tools%2FclitkCropImage.ggo;h=a70452dda7c8d650770c799f66d15124905c27a1;hb=05e26237e30a14a226cb4eb480a0eb9697f8ba06;hp=ce5eab1bf95eb33df9c375bb39411684a8d39298;hpb=b19b2e28476b45595584110623b360e1b6edbb5a;p=clitk.git

diff --git a/tools/clitkCropImage.ggo b/tools/clitkCropImage.ggo
old mode 100755
new mode 100644
index ce5eab1..a70452d
--- a/tools/clitkCropImage.ggo
+++ b/tools/clitkCropImage.ggo
@@ -1,14 +1,34 @@
 #File clitkCropImage.ggo
 package "clitkCropImage"
 version "1.0"
-purpose "Reduce the image size by removing regions at the lower and upper end."
+purpose "Crop an image according to a given extends or AutoCrop with a background value or like another image.
+In all cases, by default, the output origin is set to be able to overlay input and output without registration."
 
-option "config"	  	-	"Config file"			  string  	no
-option "verbose"   	v   	"Verbose"			  flag		off
+option "config"	           -  "Config file"                 string  no
+option "imagetypes"        -  "Display allowed image types" flag    off
+option "verbose"           v  "Verbose"			    flag    off
+option "verboseOption"     -  "Display options values"      flag    off
+option "verboseWarningOff" -  "Do not display warning"      flag    off
+
+section "I/O"
 
 option "input"		i	"Input image filename"		  string  	yes
 option "output"    	o   	"Output image filename"		  string 	yes
-option "boundingBox"   	b   	"Bounding box of the crop region" int 	no 	multiple
-option "lower"    	l   	"Size of the lower crop region"	  int 	no  multiple
-option "upper"    	u   	"Size of the upper crop region"	  int 	no  multiple
+
+section "Used determined crop"
+option "boundingBox"   	b   	"Bounding box of the crop region (in 3D: =x1,x2,y1,y2,z1,z2)"  int 	no  multiple
+option "lower"    	l   	"Size of the lower crop region (multiple values)"	  int 	no  multiple
+option "upper"    	u   	"Size of the upper crop region (multiple values)"	  int 	no  multiple
 option "origin"    	-   	"Set new origin to zero"	  flag 	off  
+
+section "AutoCrop with BG value"
+option "BG"		-	"Background value in input."      double default="0" no
+
+section "Crop like another image"
+option "like"		-	"Crop like this image (must have the same spacing"   string no
+option "updateOrigin"    	-   	"By default, with like image, the output origin is the same than the like image. Set to on the flag to keep the origin."	  flag 	off
+option "BGLike"		-	"Background value in output (if like larger)"        double default="0" no
+
+
+
+