X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;ds=sidebyside;f=vv%2FvvMainWindow.cxx;h=1476dd4f2e98e6a8e2313ddd22baea5af83a6136;hb=05413db25dc1daf6d79b45caa2a75668bf5e13e7;hp=9ee7f8c2eb26e9d5133ade0a36704610fc47adb3;hpb=7a4f96cb761fcb660ead67906c19d4b74350931d;p=clitk.git

diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx
index 9ee7f8c..1476dd4 100644
--- a/vv/vvMainWindow.cxx
+++ b/vv/vvMainWindow.cxx
@@ -124,7 +124,7 @@ It is distributed under dual licence
 
 //------------------------------------------------------------------------------
 vvMainWindow::vvMainWindow():vvMainWindowBase()
-{ //out << __func__ << endl;
+{ 
   setupUi(this); // this sets up the GUI
 
   mInputPathName = "";
@@ -387,13 +387,13 @@ vvMainWindow::vvMainWindow():vvMainWindowBase()
 }
 //------------------------------------------------------------------------------
 void vvMainWindow::show()
-{ //out << __func__ << endl;
+{ 
   vvMainWindowBase::show();
   PopupRegisterForm(true);
 }
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateMemoryUsage()
-{ //out << __func__ << endl;
+{ 
   //  clitk::PrintMemory(true);
   if (clitk::GetMemoryUsageInMb() == 0) infoPanel->setMemoryInMb("NA");
   else infoPanel->setMemoryInMb(QString::number(clitk::GetMemoryUsageInMb())+" MiB");
@@ -403,7 +403,7 @@ void vvMainWindow::UpdateMemoryUsage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::createRecentlyOpenedFilesMenu()
-{ //out << __func__ << endl;
+{ 
   recentlyOpenedFilesMenu = new QMenu("Recently opened files...");
   recentlyOpenedFilesMenu->setIcon(QIcon(QString::fromUtf8(":/common/icons/open.png")));
   menuFile->insertMenu(actionOpen_Image_With_Time,recentlyOpenedFilesMenu);
@@ -415,7 +415,7 @@ void vvMainWindow::createRecentlyOpenedFilesMenu()
 //------------------------------------------------------------------------------
 
 void vvMainWindow::updateRecentlyOpenedFilesMenu(const std::list<std::string> &recent_files)
-{ //out << __func__ << endl;
+{ 
   if(recentlyOpenedFilesMenu==NULL) {
     createRecentlyOpenedFilesMenu();
   } else {
@@ -432,7 +432,7 @@ void vvMainWindow::updateRecentlyOpenedFilesMenu(const std::list<std::string> &r
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ComputeMidPosition()
-{ //out << __func__ << endl;
+{ 
   bool ok;
   int index=GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   int ref = QInputDialog::getInt(this,"Chose reference phase","Reference phase",0,0,\
@@ -457,7 +457,7 @@ mSlicerManagers[index]->GetImage()->GetVTKImages().size()-1,1,&ok);
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddContour(int image_index, vvMesh::Pointer contour, bool propagation)
-{ //out << __func__ << endl;
+{ 
   QTreeWidgetItem *item = new QTreeWidgetItem();
   item->setData(0,Qt::UserRole,"filename.vtk");
   item->setData(1,Qt::UserRole,tr("contour"));
@@ -504,7 +504,7 @@ void vvMainWindow::AddContour(int image_index, vvMesh::Pointer contour, bool pro
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenVTKContour()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size() > 0) {
     QString Extensions = "Images ( *.vtk *.obj)";
     Extensions += ";;All Files (*)";
@@ -527,7 +527,7 @@ void vvMainWindow::OpenVTKContour()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddDCStructContour(int index, QString file)
-{ //out << __func__ << endl;
+{ 
   vvMeshReader reader;
   reader.SetFilename(file.toStdString());
   vvStructSelector selector;
@@ -551,7 +551,7 @@ void vvMainWindow::AddDCStructContour(int index, QString file)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenDCStructContour()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size() > 0) {
     QString Extensions = "Dicom Files ( *.dcm RS*)";
     Extensions += ";;All Files (*)";
@@ -567,7 +567,7 @@ void vvMainWindow::OpenDCStructContour()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ComputeDeformableRegistration()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size() > 0) {
     int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
     vvDeformationDialog dialog(index,mSlicerManagers);
@@ -584,7 +584,7 @@ void vvMainWindow::ComputeDeformableRegistration()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::WarpImage()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if (!mSlicerManagers[index]->GetVF().IsNull()) {
     bool ok;
@@ -601,7 +601,7 @@ void vvMainWindow::WarpImage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::WarpImage(vvSlicerManager* selected_slicer,int reference_phase)
-{ //out << __func__ << endl;
+{ 
   if (!selected_slicer->GetVF().IsNull()) {
     QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
     QFileInfo info(selected_slicer->GetFileName().c_str());
@@ -624,7 +624,7 @@ void vvMainWindow::WarpImage(vvSlicerManager* selected_slicer,int reference_phas
 
 //------------------------------------------------------------------------------
 vvMainWindow::~vvMainWindow()
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     if (mSlicerManagers[i] != NULL)
       delete mSlicerManagers[i];
@@ -634,7 +634,7 @@ vvMainWindow::~vvMainWindow()
 
 //------------------------------------------------------------------------------
 QTabWidget * vvMainWindow::GetTab()
-{ //out << __func__ << endl;
+{ 
   return tabWidget;
 }
 //------------------------------------------------------------------------------
@@ -642,7 +642,7 @@ QTabWidget * vvMainWindow::GetTab()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::MergeImages()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = EXTENSIONS;
   Extensions += ";;All Files (*)";
   QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images"),mInputPathName,Extensions);
@@ -701,7 +701,7 @@ void vvMainWindow::MergeImages()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SliceImages()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = EXTENSIONS;
   Extensions += ";;All Files (*)";
 
@@ -718,7 +718,7 @@ void vvMainWindow::SliceImages()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::MergeImagesWithTime()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = EXTENSIONS;
   Extensions += ";;All Files (*)";
   QStringList files = QFileDialog::getOpenFileNames(this,tr("Merge Images With Time"),mInputPathName,Extensions);
@@ -740,7 +740,7 @@ void vvMainWindow::MergeImagesWithTime()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenDicom()
-{ //out << __func__ << endl;
+{ 
   std::vector<std::string> files;
 
   //std::cout << "dicomSeriesSelector " << std::endl;
@@ -753,7 +753,7 @@ void vvMainWindow::OpenDicom()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenImages()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = EXTENSIONS;
   Extensions += ";;All Files (*)";
 
@@ -768,7 +768,7 @@ void vvMainWindow::OpenImages()
 }
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenRecentImage()
-{ //out << __func__ << endl;
+{ 
   QAction * caller = qobject_cast<QAction*>(sender());
   std::vector<std::string> images;
   images.push_back(caller->text().toStdString());
@@ -780,7 +780,7 @@ void vvMainWindow::OpenRecentImage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenImageWithTime()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = EXTENSIONS;
   Extensions += ";;All Files (*)";
 
@@ -799,7 +799,7 @@ void vvMainWindow::OpenImageWithTime()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::LoadedImageType filetype)
-{ //out << __func__ << endl;
+{ 
   //Separate the way to open images and dicoms
   int fileSize;
   if (filetype == vvImageReader::IMAGE || filetype == vvImageReader::IMAGEWITHTIME)
@@ -974,7 +974,7 @@ void vvMainWindow::LoadImages(std::vector<std::string> files, vvImageReader::Loa
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateTree()
-{ //out << __func__ << endl;
+{ 
   DataTree->resizeColumnToContents(COLUMN_TREE);
   DataTree->resizeColumnToContents(COLUMN_UL_VIEW);
   DataTree->resizeColumnToContents(COLUMN_UR_VIEW);
@@ -988,7 +988,7 @@ void vvMainWindow::UpdateTree()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::CurrentImageChanged(std::string id)
-{ //out << __func__ << endl;
+{ 
   if (id == mCurrentSelectedImageId) return; // Do nothing
   int selected = 0;
   for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
@@ -1015,7 +1015,7 @@ void vvMainWindow::CurrentImageChanged(std::string id)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::CurrentPickedImageChanged(std::string id)
-{ //out << __func__ << endl;
+{ 
   if (id == mCurrentPickedImageId) return; // Do nothing
   int selected = 0;
   for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
@@ -1036,7 +1036,7 @@ void vvMainWindow::CurrentPickedImageChanged(std::string id)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ImageInfoChanged()
-{ //out << __func__ << endl;
+{ 
   contextActions[6]->setEnabled(1);
   contextActions[5]->setEnabled(1);
   actionSave_As->setEnabled(1);
@@ -1214,14 +1214,14 @@ void vvMainWindow::ImageInfoChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ShowDocumentation()
-{ //out << __func__ << endl;
+{ 
   documentation->show();
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::PopupRegisterForm(bool checkCanPush)
-{ //out << __func__ << endl;
+{ 
   vvRegisterForm* registerForm = new vvRegisterForm(QUrl("http://www.creatis.insa-lyon.fr/~dsarrut/vvregister/write.php"), getVVSettingsPath(), getSettingsOptionFormat());
   if(!checkCanPush) {
     registerForm->show();
@@ -1236,14 +1236,14 @@ void vvMainWindow::PopupRegisterForm(bool checkCanPush)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ShowHelpDialog()
-{ //out << __func__ << endl;
+{ 
   help_dialog->show();
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ChangeViewMode()
-{ //out << __func__ << endl;
+{ 
   typedef struct _SIZE{
     QSplitter* splitter;
     QList<int> size1, size2;
@@ -1327,7 +1327,7 @@ void vvMainWindow::ChangeViewMode()
 
 //------------------------------------------------------------------------------
 QString vvMainWindow::GetSizeInBytes(unsigned long size)
-{ //out << __func__ << endl;
+{ 
   QString result = "";// QString::number(size);
   //result += " bytes (";
   if (size > 1000000000) {
@@ -1349,7 +1349,7 @@ QString vvMainWindow::GetSizeInBytes(unsigned long size)
 
 //------------------------------------------------------------------------------
 QString vvMainWindow::GetVectorDoubleAsString(std::vector<double> vectorDouble)
-{ //out << __func__ << endl;
+{ 
   QString result;
   for (unsigned int i= 0; i < vectorDouble.size(); i++) {
     if (i != 0)
@@ -1362,7 +1362,7 @@ QString vvMainWindow::GetVectorDoubleAsString(std::vector<double> vectorDouble)
 
 //------------------------------------------------------------------------------
 QString vvMainWindow::GetVectorIntAsString(std::vector<int> vectorInt)
-{ //out << __func__ << endl;
+{ 
   QString result;
   for (unsigned int i= 0; i < vectorInt.size(); i++) {
     if (i != 0)
@@ -1376,7 +1376,7 @@ QString vvMainWindow::GetVectorIntAsString(std::vector<int> vectorInt)
 //------------------------------------------------------------------------------
 //this actually returns the SlicerManager index!
 int vvMainWindow::GetSlicerIndexFromItem(QTreeWidgetItem* item)
-{ //out << __func__ << endl;
+{ 
   QString id = item->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString();
   for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
     if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString() == id)
@@ -1388,7 +1388,7 @@ int vvMainWindow::GetSlicerIndexFromItem(QTreeWidgetItem* item)
 
 //------------------------------------------------------------------------------
 QTreeWidgetItem* vvMainWindow::GetItemFromSlicerManager(vvSlicerManager* sm)
-{ //out << __func__ << endl;
+{ 
   QString id = sm->GetId().c_str();
   for (int i = 0; i < DataTree->topLevelItemCount(); i++) {
     if (DataTree->topLevelItem(i)->data(COLUMN_IMAGE_NAME,Qt::UserRole).toString() == id)
@@ -1400,7 +1400,7 @@ QTreeWidgetItem* vvMainWindow::GetItemFromSlicerManager(vvSlicerManager* sm)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::DisplayChanged(QTreeWidgetItem *clickedItem, int column)
-{ //out << __func__ << endl;
+{ 
   if ( column >= COLUMN_CLOSE_IMAGE || column <= 0)
     return;
 
@@ -1468,7 +1468,7 @@ void vvMainWindow::DisplayChanged(QTreeWidgetItem *clickedItem, int column)
 //------------------------------------------------------------------------------
 
 void vvMainWindow::InitSlicers()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size()) {
     mSlicerManagers.back()->GenerateDefaultLookupTable();
     mSlicerManagers.back()->SetSlicerWindow(0,NOViewWidget->GetRenderWindow());
@@ -1481,7 +1481,7 @@ void vvMainWindow::InitSlicers()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::InitDisplay()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size()) {
     //BE CAREFUL : this is absolutely necessary to set the interactor style
     //in order to have the same style instanciation for all SlicerManagers in
@@ -1516,7 +1516,7 @@ void vvMainWindow::InitDisplay()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::DisplaySliders(int slicer, int window)
-{ //out << __func__ << endl;
+{ 
   if(!mSlicerManagers[slicer]->GetSlicer(window)->GetRenderer()->GetDraw())
     return;
 
@@ -1545,7 +1545,7 @@ void vvMainWindow::DisplaySliders(int slicer, int window)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::CloseImage(QTreeWidgetItem* item, int column)
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(item);
 
   if (DataTree->topLevelItem(index) != item) {
@@ -1663,7 +1663,7 @@ void vvMainWindow::CloseImage(QTreeWidgetItem* item, int column)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ReloadImage(QTreeWidgetItem* item, int column)
-{ //out << __func__ << endl;
+{ 
   // int index = GetSlicerIndexFromItem(item);
   //   QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
   //   if (item->data(1,Qt::UserRole).toString() == "vector")
@@ -1703,28 +1703,28 @@ void vvMainWindow::ReloadImage(QTreeWidgetItem* item, int column)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::MousePositionChanged(int visibility,double x, double y, double z, double X, double Y, double Z , double value)
-{ //out << __func__ << endl;
+{ 
   infoPanel->setCurrentInfo(visibility,x,y,z,X,Y,Z,value);
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::VectorChanged(int visibility,double x, double y, double z, double value)
-{ //out << __func__ << endl;
+{ 
   overlayPanel->getCurrentVectorInfo(visibility,x,y,z,value);
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OverlayChanged(int visibility, double valueOver, double valueRef)
-{ //out << __func__ << endl;
+{ 
   overlayPanel->getCurrentOverlayInfo(visibility,valueOver, valueRef);
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::FusionChanged(int visibility, double value)
-{ //out << __func__ << endl;
+{ 
   overlayPanel->getCurrentFusionInfo(visibility,value);
 }
 //------------------------------------------------------------------------------
@@ -1734,7 +1734,7 @@ void vvMainWindow::FusionChanged(int visibility, double value)
 //or when UpdateWindowLevel() is called ; when slicerManager emits WindowLevelChanged
 //when ImageInfoChanged() is called
 void vvMainWindow::WindowLevelChanged()
-{ //out << __func__ << endl;
+{ 
   // Base image
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if(index==-1) return;
@@ -1789,7 +1789,7 @@ void vvMainWindow::WindowLevelChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::WindowLevelEdited()
-{ //out << __func__ << endl;
+{ 
   presetComboBox->setCurrentIndex(WL_USER);
   UpdateWindowLevel();
 }
@@ -1797,7 +1797,7 @@ void vvMainWindow::WindowLevelEdited()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SetWindowLevel(double w, double l)
-{ //out << __func__ << endl;
+{ 
   windowSpinBox->setValue(w);
   levelSpinBox->setValue(l);
   presetComboBox->setCurrentIndex(WL_USER);
@@ -1808,7 +1808,7 @@ void vvMainWindow::SetWindowLevel(double w, double l)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateWindowLevel()
-{ //out << __func__ << endl;
+{ 
   if (DataTree->selectedItems().size()) {
     if (presetComboBox->currentIndex() == WL_VENTILATION) //For ventilation
       colorMapComboBox->setCurrentIndex(5);
@@ -1824,7 +1824,7 @@ void vvMainWindow::UpdateWindowLevel()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateSlicingPreset()
-{ //out << __func__ << endl;
+{ 
   if (DataTree->selectedItems().size()) {
     int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
     mSlicerManagers[index]->SetSlicingPreset(vvSlicerManager::SlicingPresetType(slicingPresetComboBox->currentIndex()));
@@ -1834,7 +1834,7 @@ void vvMainWindow::UpdateSlicingPreset()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateColorMap()
-{ //out << __func__ << endl;
+{ 
   if (DataTree->selectedItems().size()) {
     int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
     mSlicerManagers[index]->SetColorMap(colorMapComboBox->currentIndex());
@@ -1843,7 +1843,7 @@ void vvMainWindow::UpdateColorMap()
 }
 //------------------------------------------------------------------------------
 void vvMainWindow::SwitchWindowLevel()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   int window = mSlicerManagers[index]->GetColorWindow();
   presetComboBox->setCurrentIndex(WL_USER);
@@ -1854,7 +1854,7 @@ void vvMainWindow::SwitchWindowLevel()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ApplyWindowLevelToAllImages()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if(index==-1) return;
   double window = mSlicerManagers[index]->GetColorWindow();
@@ -1883,7 +1883,7 @@ void vvMainWindow::ApplyWindowLevelToAllImages()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ApplyWindowToSetOfImages(double window, unsigned int indexMin, unsigned int indexMax)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = indexMin; i <= indexMax && i < mSlicerManagers.size(); i++) {
     if (mSlicerManagers[i] == NULL)
       continue;
@@ -1896,7 +1896,7 @@ void vvMainWindow::ApplyWindowToSetOfImages(double window, unsigned int indexMin
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ApplyLevelToSetOfImages(double level, unsigned int indexMin, unsigned int indexMax)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = indexMin; i <= indexMax && i < mSlicerManagers.size(); i++) {
     if (mSlicerManagers[i] == NULL)
       continue;
@@ -1909,7 +1909,7 @@ void vvMainWindow::ApplyLevelToSetOfImages(double level, unsigned int indexMin,
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, double y, double z, int temps)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     if (mSlicerManagers[i]->GetId() == id) {
       mSlicerManagers[i]->GetSlicer(slicer)->SetCurrentPosition(x,y,z,temps);
@@ -1922,7 +1922,7 @@ void vvMainWindow::UpdateLinkManager(std::string id, int slicer, double x, doubl
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateLinkedNavigation(std::string id, vvSlicerManager * sm, vvSlicer* refSlicer)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     if (id == mSlicerManagers[i]->GetId()) {
       mSlicerManagers[i]->UpdateLinkedNavigation(refSlicer);
@@ -1933,7 +1933,7 @@ void vvMainWindow::UpdateLinkedNavigation(std::string id, vvSlicerManager * sm,
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ShowContextMenu(QPoint point)
-{ //out << __func__ << endl;
+{ 
   if (!DataTree->selectedItems().size()) {
     contextActions[1]->setEnabled(0);
     contextActions[2]->setEnabled(0);
@@ -1962,21 +1962,21 @@ void vvMainWindow::ShowContextMenu(QPoint point)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::CloseImage()
-{ //out << __func__ << endl;
+{ 
   CloseImage(DataTree->selectedItems()[0],0);
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ReloadImage()
-{ //out << __func__ << endl;
+{ 
   ReloadImage(DataTree->selectedItems()[0],0);
 }
 //------------------------------------------------------------------------------
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SelectOverlayImage()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
 
   //check if one overlay image is added
@@ -2006,7 +2006,7 @@ void vvMainWindow::SelectOverlayImage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddOverlayImage(int index, std::vector<std::string> fileNames, vvImageReader::LoadedImageType type)
-{ //out << __func__ << endl;
+{ 
   QString file(fileNames[0].c_str());
   if (QFile::exists(file))
   {
@@ -2086,7 +2086,7 @@ void vvMainWindow::AddOverlayImage(int index, std::vector<std::string> fileNames
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddROI(int index, QString file)
-{ //out << __func__ << endl;
+{ 
   /*
   // Get slice manager
 
@@ -2113,7 +2113,7 @@ void vvMainWindow::AddROI(int index, QString file)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SelectFusionImage()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
 
   //check if one fusion image is added
@@ -2143,7 +2143,7 @@ void vvMainWindow::SelectFusionImage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ResetTransformationToIdentity()
-{ //out << __func__ << endl;
+{ 
   std::string actorType = DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString().toStdString();
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   mSlicerManagers[index]->ResetTransformationToIdentity(actorType);
@@ -2153,7 +2153,7 @@ void vvMainWindow::ResetTransformationToIdentity()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddFusionImage(int index, std::vector<std::string> fileNames, vvImageReader::LoadedImageType type)
-{ //out << __func__ << endl;
+{ 
   QString file(fileNames[0].c_str());
   if (QFile::exists(file))
   {
@@ -2231,7 +2231,7 @@ void vvMainWindow::AddFusionImage(int index, std::vector<std::string> fileNames,
 //------------------------------------------------------------------------------
 //------------------------------------------------------------------------------
 void vvMainWindow::AddLandmarks(int index, std::vector<std::string> files)
-{ //out << __func__ << endl;
+{ 
     if (!landmarksPanel->LoadFromFile(files))
       QMessageBox::information(this,tr("Problem reading Landmarks !"),"File doesn't exist!");
 
@@ -2241,7 +2241,7 @@ void vvMainWindow::AddLandmarks(int index, std::vector<std::string> files)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::OpenField()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   //check if a vector field has already been added
   for (int child = 0; child < DataTree->topLevelItem(index)->childCount(); child++)
@@ -2269,7 +2269,7 @@ void vvMainWindow::OpenField()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddFieldEntry(QString filename,int index,bool from_disk)
-{ //out << __func__ << endl;
+{ 
   //create an item in the tree with good settings
   QTreeWidgetItem *item = new QTreeWidgetItem();
   item->setData(0,Qt::UserRole,filename.toStdString().c_str());
@@ -2320,7 +2320,7 @@ void vvMainWindow::AddFieldEntry(QString filename,int index,bool from_disk)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddField(vvImage::Pointer vf,QString file,int index)
-{ //out << __func__ << endl;
+{ 
   QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
   vvSlicerManager* imageManager = mSlicerManagers[index];
   if (imageManager->SetVF(vf,file.toStdString())) {
@@ -2337,7 +2337,7 @@ void vvMainWindow::AddField(vvImage::Pointer vf,QString file,int index)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddField(QString file,int index)
-{ //out << __func__ << endl;
+{ 
   if (QFile::exists(file)) {
     mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
 
@@ -2369,7 +2369,7 @@ void vvMainWindow::AddField(QString file,int index)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width, double r, double g, double b)
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if (mSlicerManagers[index]->GetSlicer(0)->GetVF()) {
     for (int i = 0; i < 4; i++) {
@@ -2389,7 +2389,7 @@ void vvMainWindow::SetVFProperty(int subsampling, int scale, int log, int width,
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SetOverlayProperty(int color, int linked, double window, double level)
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if (mSlicerManagers[index]->GetSlicer(0)->GetOverlay()) {
     mSlicerManagers[index]->SetOverlayColor(color);
@@ -2404,7 +2404,7 @@ void vvMainWindow::SetOverlayProperty(int color, int linked, double window, doub
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SetFusionProperty(int opacity, int thresOpacity, int colormap,double window, double level, bool showLegend)
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   if (mSlicerManagers[index]->GetSlicer(0)->GetFusion()) {
     mSlicerManagers[index]->SetFusionColorMap(colormap);
@@ -2422,7 +2422,7 @@ void vvMainWindow::SetFusionProperty(int opacity, int thresOpacity, int colormap
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SelectFusionSequence()
-{ //out << __func__ << endl;
+{ 
   //get the index of the slicer manager of the main sequence (CT)
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   //check if one overlay image is already associated
@@ -2455,7 +2455,7 @@ void vvMainWindow::SelectFusionSequence()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SelectFusionSequenceCorrespondances() 
-{ //out << __func__ << endl;
+{ 
   //make sure the index is right?
   //in the end, I should attach the temporal data to the right sequence!
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
@@ -2519,7 +2519,7 @@ void vvMainWindow::SelectFusionSequenceCorrespondances()
 //when this function is called index is the slicer manager index corresponding to the main sequence (CT)
 //the files behind fileNames points to the data for the secondary sequence
 void vvMainWindow::AddFusionSequence(int index, std::vector<std::string> fileNames, vvImageReader::LoadedImageType type)
-{ //out << __func__ << endl;
+{ 
   QString file(fileNames[0].c_str());
   if (QFile::exists(file))
   {
@@ -2640,7 +2640,7 @@ void vvMainWindow::AddFusionSequence(int index, std::vector<std::string> fileNam
 //------------------------------------------------------------------------------
 //fusionSequenceFrameIndex and fusionSequenceNbFrames are relative to the secondary sequence (US)
 void vvMainWindow::SetFusionSequenceProperty(int fusionSequenceFrameIndex, bool spatialSyncFlag, unsigned int fusionSequenceNbFrames, bool temporalSyncFlag)
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
 
   if (!mSlicerManagers[index]->IsInvolvedInFusionSequence()) return;
@@ -2720,7 +2720,7 @@ void vvMainWindow::SetFusionSequenceProperty(int fusionSequenceFrameIndex, bool
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveAs()
-{ //out << __func__ << endl;
+{ 
   if (DataTree->selectedItems()[0]->data(1,Qt::UserRole).toString() == "vector") {
     QMessageBox::warning(this,tr("Unsupported type"),tr("Sorry, saving a vector field is unsupported for the moment"));
     return;
@@ -2824,7 +2824,7 @@ void vvMainWindow::SaveAs()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveCurrentState()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = "XML Files(*.xml)";
   QString fileName = QFileDialog::getSaveFileName(this,
     tr("Save Current Window State"),
@@ -2837,14 +2837,14 @@ void vvMainWindow::SaveCurrentState()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveCurrentStateAs(const std::string& stateFile)
-{ //out << __func__ << endl;
+{ 
   vvSaveState save_state;
   save_state.Run(this, stateFile);
 }
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ReadSavedState()
-{ //out << __func__ << endl;
+{ 
   QString Extensions = "XML Files(*.xml)";
   QString fileName = QFileDialog::getOpenFileName(this,
     tr("Load Window State"),
@@ -2857,7 +2857,7 @@ void vvMainWindow::ReadSavedState()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ReadSavedStateFile(const std::string& stateFile)
-{ //out << __func__ << endl;
+{ 
   vvReadState read_state;
   read_state.Run(this, stateFile);
 }
@@ -2865,13 +2865,13 @@ void vvMainWindow::ReadSavedStateFile(const std::string& stateFile)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::LinkAllImages()
-{ //out << __func__ << endl;
+{ 
   linkPanel->linkAll();
 }
 
 //------------------------------------------------------------------------------
 void vvMainWindow::AddLink(QString image1,QString image2,bool fromPanel)
-{ //out << __func__ << endl;
+{ 
   if (!fromPanel) {
     // delegate to linkPanel if call came from elsewhere...
     linkPanel->addLinkFromIds(image1, image2);
@@ -2905,7 +2905,7 @@ void vvMainWindow::AddLink(QString image1,QString image2,bool fromPanel)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::RemoveLink(QString image1,QString image2)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     if (image1.toStdString() == mSlicerManagers[i]->GetId()) {
       mSlicerManagers[i]->RemoveLink(image2.toStdString());
@@ -2919,7 +2919,7 @@ void vvMainWindow::RemoveLink(QString image1,QString image2)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::ChangeImageWithIndexOffset(vvSlicerManager *sm, int slicer, int offset)
-{ //out << __func__ << endl;
+{ 
   if(mSlicerManagers.size()==1)
     return;
 
@@ -2935,7 +2935,7 @@ void vvMainWindow::ChangeImageWithIndexOffset(vvSlicerManager *sm, int slicer, i
 }
 //------------------------------------------------------------------------------
 void vvMainWindow::HorizontalSliderMoved(int value,int column, int slicer_index)
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     if (DataTree->topLevelItem(i)->data(column,Qt::CheckStateRole).toInt() > 1) {
       //i is the SlicerManager that is in charge of this slicer.
@@ -2972,7 +2972,7 @@ void vvMainWindow::HorizontalSliderMoved(int value,int column, int slicer_index)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::NOHorizontalSliderMoved()
-{ //out << __func__ << endl;
+{ 
   // if (mCurrentTime == NOHorizontalSlider->value()) return;
   HorizontalSliderMoved(NOHorizontalSlider->value(),COLUMN_UL_VIEW,0);
   //  mCurrentTime = NOHorizontalSlider->value();
@@ -2982,7 +2982,7 @@ void vvMainWindow::NOHorizontalSliderMoved()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::NEHorizontalSliderMoved()
-{ //out << __func__ << endl;
+{ 
   // if (mCurrentTime == NEHorizontalSlider->value()) return;
   HorizontalSliderMoved(NEHorizontalSlider->value(),COLUMN_UR_VIEW,1);
   //  mCurrentTime = NEHorizontalSlider->value();
@@ -2992,7 +2992,7 @@ void vvMainWindow::NEHorizontalSliderMoved()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SOHorizontalSliderMoved()
-{ //out << __func__ << endl;
+{ 
   // if (mCurrentTime == SOHorizontalSlider->value()) return;
   HorizontalSliderMoved(SOHorizontalSlider->value(),COLUMN_DL_VIEW,2);
   // mCurrentTime = SOHorizontalSlider->value();
@@ -3002,7 +3002,7 @@ void vvMainWindow::SOHorizontalSliderMoved()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SEHorizontalSliderMoved()
-{ //out << __func__ << endl;
+{ 
   // if (mCurrentTime == SEHorizontalSlider->value()) return;
   HorizontalSliderMoved(SEHorizontalSlider->value(),COLUMN_DR_VIEW,3);
   // mCurrentTime = SEHorizontalSlider->value();
@@ -3011,7 +3011,7 @@ void vvMainWindow::SEHorizontalSliderMoved()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::NOVerticalSliderChanged()
-{ //out << __func__ << endl;
+{ 
   static int value=-1;
   if (value == NOVerticalSlider->value()) return;
   else value = NOVerticalSlider->value();
@@ -3037,7 +3037,7 @@ void vvMainWindow::NOVerticalSliderChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::NEVerticalSliderChanged()
-{ //out << __func__ << endl;
+{ 
   static int value=-1;
   if (value == NEVerticalSlider->value()) return;
   else value = NEVerticalSlider->value();
@@ -3059,7 +3059,7 @@ void vvMainWindow::NEVerticalSliderChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SOVerticalSliderChanged()
-{ //out << __func__ << endl;
+{ 
   static int value=-1;
   if (value == SOVerticalSlider->value()) return;
   else value = SOVerticalSlider->value();
@@ -3082,7 +3082,7 @@ void vvMainWindow::SOVerticalSliderChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SEVerticalSliderChanged()
-{ //out << __func__ << endl;
+{ 
   static int value=-1;
   if (value == SEVerticalSlider->value()) return;
   else value = SEVerticalSlider->value();
@@ -3104,7 +3104,7 @@ void vvMainWindow::SEVerticalSliderChanged()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateSlice(int slicer, int slice)
-{ //out << __func__ << endl;
+{ 
   // DD("vvMainWindow::UpdateSlice");
   //   DD(slicer);
   //   DD(slice);
@@ -3130,7 +3130,7 @@ void vvMainWindow::UpdateSlice(int slicer, int slice)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateTSlice(int slicer, int slice, int code)
-{ //out << __func__ << endl;
+{ 
   //FusionSequence: the slider value should be updated for slicers which show the same sequence as requested
   bool doUpdate=false;
   if (code==-1) doUpdate=true;
@@ -3169,7 +3169,7 @@ void vvMainWindow::UpdateTSlice(int slicer, int slice, int code)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int tmax)
-{ //out << __func__ << endl;
+{ 
   //int position = int((min+max)/2);
   int position = mSlicerManagers[mCurrentPickedImageIndex]->GetSlicer(slicer)->GetSlice();
   if (slicer == 0) {
@@ -3195,7 +3195,7 @@ void vvMainWindow::UpdateSliceRange(int slicer, int min, int max, int tmin, int
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveNOScreenshot()
-{ //out << __func__ << endl;
+{ 
   SaveScreenshot(NOViewWidget);
 }
 //------------------------------------------------------------------------------
@@ -3203,7 +3203,7 @@ void vvMainWindow::SaveNOScreenshot()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveNEScreenshot()
-{ //out << __func__ << endl;
+{ 
   SaveScreenshot(NEViewWidget);
 }
 //------------------------------------------------------------------------------
@@ -3211,7 +3211,7 @@ void vvMainWindow::SaveNEScreenshot()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveSOScreenshot()
-{ //out << __func__ << endl;
+{ 
   SaveScreenshot(SOViewWidget);
 }
 //------------------------------------------------------------------------------
@@ -3219,7 +3219,7 @@ void vvMainWindow::SaveSOScreenshot()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveSEScreenshot()
-{ //out << __func__ << endl;
+{ 
   SaveScreenshot(SEViewWidget);
 }
 //------------------------------------------------------------------------------
@@ -3227,7 +3227,7 @@ void vvMainWindow::SaveSEScreenshot()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveScreenshotAllSlices()
-{ //out << __func__ << endl;
+{ 
   QVTKWidget *widget = NOViewWidget;
 
   int index = 0;// GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
@@ -3281,7 +3281,7 @@ void vvMainWindow::SaveScreenshotAllSlices()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
-{ //out << __func__ << endl;
+{ 
   QString Extensions = "Images( *.png);;";
   Extensions += "Images( *.jpg);;";
   Extensions += "Images( *.bmp);;";
@@ -3433,7 +3433,7 @@ void vvMainWindow::SaveScreenshot(QVTKWidget *widget)
 
 //------------------------------------------------------------------------------
 void vvMainWindow::GoToCursor()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   for (int column = 1; column < 5; column++) {
     if (DataTree->selectedItems()[0]->data(column,Qt::CheckStateRole).toInt() > 1) {
@@ -3450,7 +3450,7 @@ void vvMainWindow::GoToCursor()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::GoToLandmark()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
   for (int column = 1; column < 5; column++) {
     if (DataTree->selectedItems()[0]->data(column,Qt::CheckStateRole).toInt() > 1) {
@@ -3467,7 +3467,7 @@ void vvMainWindow::GoToLandmark()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::PlayPause()
-{ //out << __func__ << endl;
+{ 
   if (playMode) {
     playMode = 0;
     playButton->setIcon(QIcon(QString::fromUtf8(":/common/icons/player_play.png")));
@@ -3492,7 +3492,7 @@ void vvMainWindow::PlayPause()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::PlayNext()
-{ //out << __func__ << endl;
+{ 
   if (playMode && !this->isHidden()) {
     int image_number=DataTree->topLevelItemCount();
     ///Only play one slicer per SM, and only if the SM is being displayed
@@ -3509,7 +3509,7 @@ void vvMainWindow::PlayNext()
 //------------------------------------------------------------------------------
 
 void vvMainWindow::ShowLastImage()
-{ //out << __func__ << endl;
+{ 
   if (mSlicerManagers.size() > 1) {
     QTreeWidgetItem * item=DataTree->topLevelItem(DataTree->topLevelItemCount()-1);
     CurrentImageChanged(mSlicerManagers.back()->GetId()); //select new image
@@ -3521,7 +3521,7 @@ void vvMainWindow::ShowLastImage()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateRenderWindows()
-{ //out << __func__ << endl;
+{ 
   for (unsigned int i = 0; i < mSlicerManagers.size(); i++) {
     mSlicerManagers[i]->GetSlicer(0)->UpdateLandmarks();
     mSlicerManagers[i]->GetSlicer(1)->UpdateLandmarks();
@@ -3537,7 +3537,7 @@ void vvMainWindow::UpdateRenderWindows()
 
 //------------------------------------------------------------------------------
 void vvMainWindow::SegmentationOnCurrentImage()
-{ //out << __func__ << endl;
+{ 
   int index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);
 
   vvSegmentationDialog segmentation;
@@ -3547,7 +3547,7 @@ void vvMainWindow::SegmentationOnCurrentImage()
 //------------------------------------------------------------------------------
 
 void vvMainWindow::SurfaceViewerLaunch()
-{ //out << __func__ << endl;
+{ 
   vvSurfaceViewerDialog surfaceViewer;
   surfaceViewer.exec();
 }
@@ -3556,7 +3556,7 @@ void vvMainWindow::SurfaceViewerLaunch()
 
 //------------------------------------------------------------------------------
 int vvMainWindow::GetImageDuplicateFilenameNumber(std::string filename)
-{ //out << __func__ << endl;
+{ 
   int number=0;
   for(unsigned int l=0; l<mSlicerManagers.size(); l++) {
     vvSlicerManager * v = mSlicerManagers[l];
@@ -3572,7 +3572,7 @@ int vvMainWindow::GetImageDuplicateFilenameNumber(std::string filename)
 
 //------------------------------------------------------------------------------
 vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filename)
-{ //out << __func__ << endl;
+{ 
   // Change filename if another image exist with the same name
   int number = GetImageDuplicateFilenameNumber(filename);
 
@@ -3670,7 +3670,7 @@ vvSlicerManager* vvMainWindow::AddImage(vvImage::Pointer image,std::string filen
 
 //------------------------------------------------------------------------------
 void vvMainWindow::UpdateCurrentSlicer()
-{ //out << __func__ << endl;
+{ 
   int index = -1;
   if (DataTree->selectedItems().size() > 0) {
     index = GetSlicerIndexFromItem(DataTree->selectedItems()[0]);