X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Example%2FPrintDicomDir.cxx;h=145d33dd01f948dee8abb25f42dbeecb370baafb;hb=e7a642c06e4cdcfdbaf024090754283ccc564408;hp=852ba533ccfff87269dd986668292fc99e3e03a2;hpb=018ae9242a852cb91debaf71951d00876fc3d876;p=gdcm.git diff --git a/Example/PrintDicomDir.cxx b/Example/PrintDicomDir.cxx index 852ba533..145d33dd 100644 --- a/Example/PrintDicomDir.cxx +++ b/Example/PrintDicomDir.cxx @@ -1,124 +1,313 @@ -#include -#include "gdcm.h" +/*========================================================================= + + Program: gdcm + Module: $RCSfile: PrintDicomDir.cxx,v $ + Language: C++ + Date: $Date: 2007/05/23 14:18:04 $ + Version: $Revision: 1.36 $ + + Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de + l'Image). All rights reserved. See Doc/License.txt or + http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. + + This software is distributed WITHOUT ANY WARRANTY; without even + the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR + PURPOSE. See the above copyright notices for more information. + +=========================================================================*/ #include "gdcmDocument.h" #include "gdcmDicomDir.h" -#include "gdcmValEntry.h" +#include "gdcmDicomDirPatient.h" +#include "gdcmDicomDirStudy.h" +#include "gdcmDicomDirVisit.h" +#include "gdcmDicomDirSerie.h" +#include "gdcmDicomDirImage.h" +#include "gdcmDicomDirPrivate.h" +#include "gdcmTS.h" +#include "gdcmDebug.h" -#include +#include "gdcmArgMgr.h" -using namespace std; +#include +#include int main(int argc, char* argv[]) -{ - gdcmDicomDir *e1; - - ListDicomDirPatient::iterator itPatient; - ListDicomDirStudy::iterator itStudy; - ListDicomDirSerie::iterator itSerie; - ListDicomDirImage::iterator itImage; - TSKey v; - - std::string file; - if (argc > 1) - file = argv[1]; - else { - file += GDCM_DATA_ROOT; - file += "/DICOMDIR"; +{ + START_USAGE(usage) + " \n PrintDicomDir :\n ", + " Display the tree-like structure of a DICOMDIR File ", + " usage: PrintDicomDir filein=fileName [level=n][detail=m][debug] ", + " detail = 1 : Patients, 2 : Studies, 3 : Series, 4 : Images ", + " 5 : Full Content ", + " level = 0,1,2 : depending on user (what he wants to see) ", + " warning : user wants to run the program in 'warning mode' ", + " debug : developper wants to run the program in 'debug mode' ", + FINISH_USAGE + + // Initialize Arguments Manager + GDCM_NAME_SPACE::ArgMgr *am= new GDCM_NAME_SPACE::ArgMgr(argc, argv); + + if (argc == 1 || am->ArgMgrDefined("usage") ) + { + am->ArgMgrUsage(usage); // Display 'usage' + delete am; + return 0; } + + GDCM_NAME_SPACE::DicomDir *f; + GDCM_NAME_SPACE::TSKey v; + + GDCM_NAME_SPACE::DicomDirPatient *pa; + GDCM_NAME_SPACE::DicomDirStudy *st; + GDCM_NAME_SPACE::DicomDirSerie *se; + GDCM_NAME_SPACE::DicomDirVisit *vs; + GDCM_NAME_SPACE::DicomDirImage *im; + GDCM_NAME_SPACE::DicomDirPrivate *pr; + char *fileName; + fileName = am->ArgMgrWantString("filein",usage); + + int level = am->ArgMgrGetInt("level", 2); + + int detailLevel = am->ArgMgrGetInt("detail", 2); + + if (am->ArgMgrDefined("debug")) + GDCM_NAME_SPACE::Debug::DebugOn(); + + if (am->ArgMgrDefined("warning")) + GDCM_NAME_SPACE::Debug::WarningOn(); + + /* if unused Param we give up */ + if ( am->ArgMgrPrintUnusedLabels() ) + { + am->ArgMgrUsage(usage); + delete am; + return 0; + } - e1 = new gdcmDicomDir( file ); + // new gdcm2 style - if (argc > 2) { - int level = atoi(argv[2]); - e1->SetPrintLevel(level); + f = GDCM_NAME_SPACE::DicomDir::New(); + f->SetFileName ( fileName ); + f->Load( ); + + // Test if the DicomDir is readable + if( !f->IsReadable() ) + { + std::cout<<" DicomDir '"<Delete(); + return 1; } - if(e1->GetDicomDirPatients().begin() == e1->GetDicomDirPatients().end() ) + f->SetPrintLevel(level); + + // Test if the DicomDir contains any Patient + pa = f->GetFirstPatient(); + if ( pa == 0) { - std::cout<<"Empty list"<Delete(); + return 1; } // Structure use Examples -// DON'T REMOVE neither the following code, nor the commented out lines -/* - cout << std::endl << std::endl - << " = PATIENT List ==========================================" - << std::endl<< std::endl; + switch (detailLevel) + { + case 1: + std::cout << std::endl << std::endl + << " = PATIENT List ==========================================" + << std::endl<< std::endl; - itPatient = e1->GetDicomDirPatients().begin(); - while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT - std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name - itPatient ++; - } -*/ + pa = f->GetFirstPatient(); + while (pa) + { + std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name + std::cout << " Pat.ID:["; + std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID + pa = f->GetNextPatient(); + } + break; -/* - cout << std::endl << std::endl - << " = PATIENT/STUDY List =======================================" - << std::endl<< std::endl; + case 2: + std::cout << std::endl << std::endl + << " = PATIENT/STUDY List =======================================" + << std::endl<< std::endl; - itPatient = e1->GetDicomDirPatients().begin(); - while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT - std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name - itStudy = ((*itPatient)->GetDicomDirStudies()).begin(); - while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient - std::cout << "--- "<< (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << std::endl; // Study Description - ++itStudy; - } - itPatient ++; - } + pa = f->GetFirstPatient(); + while ( pa ) // on degouline les PATIENT de ce DICOMDIR + { + std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name + std::cout << " Pat.ID:["; + std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID + st = pa->GetFirstStudy(); + while ( st ) + { // on degouline les STUDY de ce patient + std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description + std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID + std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID + std::cout << std::endl; + st = pa->GetNextStudy(); + } + pa = f->GetNextPatient(); + } + break; + + case 3: + std::cout << std::endl << std::endl + << " = PATIENT/STUDY/SERIE List ==================================" + << std::endl<< std::endl; + + pa = f->GetFirstPatient(); + while ( pa ) // on degouline les PATIENT de ce DICOMDIR + { + // Patient's Name, Patient ID + std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name + std::cout << " Pat.ID:["; + std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID + + st = pa->GetFirstStudy(); + while ( st ) + { // on degouline les STUDY de ce patient + std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description + std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID + std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID + std::cout << std::endl; + + se = st->GetFirstSerie(); + while ( se ) + { // on degouline les SERIES de cette study + std::cout << "--- --- Ser.Descr:["<< se->GetEntryString(0x0008, 0x103e)<< "]"; // Series Description + std::cout << " Ser.nb:[" << se->GetEntryString(0x0020, 0x0011); // Series number + std::cout << "] Mod.:[" << se->GetEntryString(0x0008, 0x0060) << "]"; // Modality + std::cout << " Serie Inst.UID.:[" << se->GetEntryString(0x0020, 0x000e) << "]"; // Series Instance UID + std::cout << std::endl; + se = st->GetNextSerie(); + } + + vs = st->GetFirstVisit(); + while ( vs ) + { // on degouline les VISIT de cette study + std::cout << "--- --- VISIT: "; + std::cout << " Ref. File ID :[" << vs->GetEntryString(0x0004, 0x1500) << "]"; // Referenced File ID + std::cout << " Inst.Name:[" << vs->GetEntryString(0x0008,0x0080) << "]"; // Institution Name + std::cout << " Adm.ID:[" << vs->GetEntryString(0x0038, 0x0010) << "]"; // Admission ID + std::cout << " Adm. date:[" << vs->GetEntryString(0x0038, 0x0020) << "]"; // Admitting Date + std::cout << std::endl; + vs = st->GetNextVisit(); + } + + st = pa->GetNextStudy(); + } + pa = f->GetNextPatient(); + } + break; + + case 4: + std::cout << std::endl << std::endl + << " = PATIENT/STUDY/SERIE/IMAGE List ============================" + << std::endl<< std::endl; + + pa = f->GetFirstPatient(); + while ( pa ) + { // les PATIENT de ce DICOMDIR + // Patient's Name, Patient ID + std::cout << "Pat.Name:[" << pa->GetEntryString(0x0010, 0x0010) <<"]"; // Patient's Name + std::cout << " Pat.ID:["; + std::cout << pa->GetEntryString(0x0010, 0x0020) << "]" << std::endl; // Patient ID + + st = pa->GetFirstStudy(); + while ( st ) + { // on degouline les STUDY de ce patient + std::cout << "--- Stud.descr:[" << st->GetEntryString(0x0008, 0x1030) << "]"; // Study Description + std::cout << " Stud.ID:[" << st->GetEntryString(0x0020, 0x0010) << "]"; // Study ID + std::cout << " Stud.Inst.UID:[" << st->GetEntryString(0x0020, 0x000d) << "]"; // Study Instance UID + std::cout << std::endl; -*/ + vs = st->GetFirstVisit(); + while ( vs ) + { // on degouline les VISIT de cette study + std::cout << "--- --- VISIT: "; + std::cout << " Ref. File ID :[" << vs->GetEntryString(0x0004, 0x1500) << "]"; // Referenced File ID + std::cout << " Inst.Name:[" << vs->GetEntryString(0x0008,0x0080) << "]"; // Institution Name + std::cout << " Adm.ID:[" << vs->GetEntryString(0x0038, 0x0010) << "]"; // Admission ID + std::cout << " Adm. date:[" << vs->GetEntryString(0x0038, 0x0020) << "]"; // Admitting Date + std::cout << std::endl; + vs = st->GetNextVisit(); + } + se = st->GetFirstSerie(); + while ( se ) + { // on degouline les SERIES de cette study + std::cout << "--- --- Ser.Descr:["<< se->GetEntryString(0x0008, 0x103e) << "]"; // Series Description + std::cout << " Ser.nb:[" << se->GetEntryString(0x0020, 0x0011) << "]"; // Series number + std::cout << " Mod.:[" << se->GetEntryString(0x0008, 0x0060) << "]"; // Modality + std::cout << " Serie Inst.UID.:[" << se->GetEntryString(0x0020, 0x000e) << "]"; // Series Instance UID + std::cout << std::endl; + + im = se->GetFirstImage(); + while ( im ) + { // on degouline les Images de cette serie + std::cout << "--- --- --- "<< " IMAGE Ref. File ID :[" << im->GetEntryString(0x0004, 0x1500) + << "]" << std::endl; // File name (Referenced File ID) + im = se->GetNextImage(); + } - cout << std::endl << std::endl - << " = PATIENT/STUDY/SERIE List ==================================" - << std::endl<< std::endl; + pr = se->GetFirstPrivate(); + while ( pr ) + { // on degouline les 'Privates' de cette serie + std::cout << "--- --- --- "<< " PRIVATE Ref. File ID :[" << pr->GetEntryString(0x0004, 0x1500) + << "]" << std::endl; // File name (Referenced File ID) + pr = se->GetNextPrivate(); + } - itPatient = e1->GetDicomDirPatients().begin(); - while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT - // Patient's Name, Patient ID - std::cout << "Pat.Name:[" << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) <<"]"; // Patient's Name - std::cout << " Pat.ID:["; - std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0020) << "]" << std::endl; // Patient ID - itStudy = ((*itPatient)->GetDicomDirStudies()).begin(); - while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient - std::cout << "--- Stud.descr:[" << (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << "]";// Study Description - std::cout << " Stud.ID:[" << (*itStudy)->GetEntryByNumber(0x0020, 0x0010); // Study ID - std::cout << "]" << std::endl; - itSerie = ((*itStudy)->GetDicomDirSeries()).begin(); - while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study - std::cout << "--- --- Ser.Descr:["<< (*itSerie)->GetEntryByNumber(0x0008, 0x103e)<< "]"; // Series Description - std::cout << " Ser.nb:[" << (*itSerie)->GetEntryByNumber(0x0020, 0x0011); // Series number - std::cout << "] Mod.:[" << (*itSerie)->GetEntryByNumber(0x0008, 0x0060) << "]"; // Modality - std::cout << std::endl; - ++itSerie; + se = st->GetNextSerie(); + } + st = pa->GetNextStudy(); + } + pa = f->GetNextPatient(); } - ++itStudy; - } - itPatient ++; - } - - + break; + + case 5: + std::cout << std::endl << std::endl + << " = DICOMDIR full content ==========================================" + << std::endl<< std::endl; + f->Print(); + break; + + } // end switch + + /* - cout << std::endl << std::endl - << " = PATIENT/STUDY/SERIE/IMAGE List ============================" + // Previous code. + // Kept as an example. Please don't remove + + GDCM_NAME_SPACE::ListDicomDirPatient::const_iterator itPatient; + GDCM_NAME_SPACE::ListDicomDirStudy::const_iterator itStudy; + GDCM_NAME_SPACE::ListDicomDirSerie::const_iterator itSerie; + GDCM_NAME_SPACE::ListDicomDirImage::const_iterator itImage; + cout << std::endl << std::endl + << " = Liste des PATIENT/STUDY/SERIE/IMAGE ===================================" << std::endl<< std::endl; - itPatient = e1->GetDicomDirPatients().begin(); - while ( itPatient != e1->GetDicomDirPatients().end() ) { // on degouline la liste de PATIENT - std::cout << (*itPatient)->GetEntryByNumber(0x0010, 0x0010) << std::endl; // Patient's Name + itPatient = f->GetDicomDirPatients().begin(); + while ( itPatient != f->GetDicomDirPatients().end() ) { // on degouline les PATIENT de ce DICOMDIR + std::cout << (*itPatient)->GetEntryString(0x0010, 0x0010) << std::endl; // Patient's Name itStudy = ((*itPatient)->GetDicomDirStudies()).begin(); while (itStudy != (*itPatient)->GetDicomDirStudies().end() ) { // on degouline les STUDY de ce patient - std::cout << "--- "<< (*itStudy)->GetEntryByNumber(0x0008, 0x1030) << std::endl; // Study Description + std::cout << "--- "<< (*itStudy)->GetEntryString(0x0008, 0x1030) << std::endl; // Study Description itSerie = ((*itStudy)->GetDicomDirSeries()).begin(); while (itSerie != (*itStudy)->GetDicomDirSeries().end() ) { // on degouline les SERIES de cette study - std::cout << "--- --- "<< (*itSerie)->GetEntryByNumber(0x0008, 0x103e) << std::endl; // Serie Description + std::cout << "--- --- "<< (*itSerie)->GetEntryString(0x0008, 0x103e) << std::endl; // Serie Description itImage = ((*itSerie)->GetDicomDirImages()).begin(); - while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les SERIES de cette study - std::cout << "--- --- --- "<< (*itImage)->GetEntryByNumber(0x0004, 0x1500) << std::endl; // File name + while (itImage != (*itSerie)->GetDicomDirImages().end() ) { // on degouline les IMAGES de cette serie + std::cout << "--- --- --- "<< (*itImage)->GetEntryString(0x0004, 0x1500) << std::endl; // File name ++itImage; } ++itSerie; @@ -130,13 +319,12 @@ int main(int argc, char* argv[]) */ -// cout << std::endl << std::endl -// << " = DICOMDIR full content ==========================================" -// << std::endl<< std::endl; -// e1->Print(); - + if(f->IsReadable()) + std::cout <Delete(); return(0); }