X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Example%2FPrintFile.cxx;h=0f3e82eaf67f48f82d7bec3a07e3b2a798410955;hb=175f7eaa4d1f56100622951645c6d677b351a5ba;hp=84d0960372826ba149c8fd35b3530685475e7182;hpb=0ed9f088aad1ff61cf96c1203145c7461f2f70d7;p=gdcm.git diff --git a/Example/PrintFile.cxx b/Example/PrintFile.cxx index 84d09603..0f3e82ea 100644 --- a/Example/PrintFile.cxx +++ b/Example/PrintFile.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: PrintFile.cxx,v $ Language: C++ - Date: $Date: 2007/09/12 12:36:50 $ - Version: $Revision: 1.85 $ + Date: $Date: 2008/05/20 09:21:22 $ + Version: $Revision: 1.91 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -30,7 +30,7 @@ #include "gdcmOrientation.h" #include -// TODO : code factorization, for 'single file' an 'whole directory' processing +/// \todo : code factorization, for 'single file' an 'whole directory' processing void ShowLutData(GDCM_NAME_SPACE::File *f); @@ -127,11 +127,12 @@ int main(int argc, char *argv[]) " usage: PrintFile {filein=inputFileName|dirin=inputDirectoryName}[level=n]", " [forceload=listOfElementsToForceLoad] [rec] [noex] ", " [4DLoc= ][dict= privateDirectory] ", - " [ { [noshadowseq] | [noshadow][noseq] } ] ", + " [ { [noshadowseq] | [noshadow][noseq] } ] [load] ", " [debug] [warning] ", " level = 0,1,2 : depending on the amount of details user wants to see", " rec : user wants to parse recursively the directory ", - " noex : user doen't want extra 'user friendly' info ", + " load : user wants to load the pixels, as well (to see warning info) ", + " noex : user doesn't want extra 'user friendly' info ", " 4DLoc: group-elem(in hexa, no space) of the DataEntry holdind 4thDim", " listOfElementsToForceLoad : group-elem,g2-e2,... (in hexa, no space)", " of Elements to load whatever their length ", @@ -193,8 +194,8 @@ int main(int argc, char *argv[]) int forceLoadNb; uint16_t *elemsToForceLoad = am->ArgMgrGetXInt16Enum("forceload", &forceLoadNb); - - int nbP; + + int nbP =0; uint16_t *FourthDimLoc; if ( am->ArgMgrDefined("4DLoc") ) { @@ -208,6 +209,8 @@ int main(int argc, char *argv[]) } } + bool load = ( 0 != am->ArgMgrDefined("load") ); + bool showlut = ( 0 != am->ArgMgrDefined("SHOWLUT") ); bool ddict = am->ArgMgrDefined("dict") ? true : false; @@ -230,55 +233,66 @@ int main(int argc, char *argv[]) // ----------- End Arguments Manager --------- - + if (ddict) { - GDCM_NAME_SPACE::Global::GetDicts()->GetDefaultPubDict()->AddDict(dict); + GDCM_NAME_SPACE::Global::GetDicts()->GetDefaultPubDict()->AddDict(dict); } if ( fileName != 0 ) // ====== Deal with a single file ====== - { + { GDCM_NAME_SPACE::File *f = GDCM_NAME_SPACE::File::New(); f->SetLoadMode(loadMode); f->SetFileName( fileName ); + f->SetMaxSizeLoadEntry(0xffff); for (int ri=0; riAddForceLoadElement((uint32_t)elemsToForceLoad[2*ri], - (uint32_t)elemsToForceLoad[2*ri+1] ); + (uint32_t)elemsToForceLoad[2*ri+1] ); } // TODO : find why such a polution -// To avoid polluting the output with messages +// To avoid polluting the output with messages // 'Last system error was : No such file or directory' errno = 0; - bool res = f->Load(); + bool res = false; + try + { + res = f->Load(); + } + catch(std::exception &ex) + { + std::cerr << "sorry an exception was thrown: " << ex.what() << std::endl; + } // GDCM_NAME_SPACE::File::IsReadable() is no usable here, because we deal with - // any kind of gdcm-Parsable *document* + // any kind of gdcm-Parsable *document* // not only GDCM_NAME_SPACE::File (as opposed to GDCM_NAME_SPACE::DicomDir) if ( !res ) { std::cout << "Cannot process file [" << fileName << "]" << std::endl; - std::cout << "Either it doesn't exist, or it's read protected " + std::cout << "Either it doesn't exist, or it's read protected " << std::endl; - std::cout << "or it's not a Dicom File, or its 'header' is bugged" + std::cout << "or it's not a Dicom File, or its 'header' is bugged" << std::endl; std::cout << "use 'PrintFile filein=... debug' to try to guess the pb" << std::endl; f->Delete(); return 0; } + if (nbP == 1) f->SetFourthDimensionLocation(FourthDimLoc[0],FourthDimLoc[1]); + GDCM_NAME_SPACE::FileHelper *fh = GDCM_NAME_SPACE::FileHelper::New(f); fh->SetPrintLevel( level ); fh->Print(); - std::cout << "\n\n" << std::endl; + std::cout << "\n\n" << std::endl; std::cout <GetImageDataSize() << std::endl; @@ -425,6 +439,20 @@ if (!noex) if (ori != "\\" ) std::cout << "Orientation [" << ori << "]" << std::endl; o->Delete(); +/* +std::vector valueVector; +GDCM_NAME_SPACE::DataEntry *e_0018_5212 = f->GetDataEntry(0x0018, 0x5212); +bool resJP = e_0018_5212->GetDSValue(valueVector); +if (resJP) { + double test; + for ( int i=0; i < 3; i++ ) { + test = valueVector[i]; + std::cout << " test " << test << std::endl; + } +} +//e_0018_5212->Delete(); +*/ + } //------------------------------ @@ -475,6 +503,7 @@ if (!noex) else std::cout << "No LUT Data (0x0028,0x3000) found " << std::endl; } + /* else { if ( fh->GetLutItemSize() == 8 ) @@ -495,6 +524,7 @@ if (!noex) << (int)(lutrgba16[i*4+2]) << std::endl; } } + */ } else if (showlut) { @@ -528,8 +558,9 @@ if (!noex) f->Delete(); fh->Delete(); } - else // ====== Deal with a Directory ====== - { + // =========================================================================== + else // =============================== Deal with a Directory ===================== + { // =========================================================================== std::cout << "dirName [" << dirName << "]" << std::endl; GDCM_NAME_SPACE::DirList dirList(dirName,rec); // gets recursively (or not) the file list @@ -537,6 +568,11 @@ if (!noex) GDCM_NAME_SPACE::File *f; bool res; + if (fileList.size() == 0) + { + std::cout << "No file found in : [" << dirName << "]" << std::endl; + } + for( GDCM_NAME_SPACE::DirListType::iterator it = fileList.begin(); it != fileList.end(); ++it ) @@ -637,15 +673,26 @@ if (!noex) std::string ori = o->GetOrientation ( f ); if (ori != "\\" ) std::cout << "Orientation [" << ori << "]" << std::endl; - o->Delete(); + o->Delete(); } //------------------------------- if (f->IsReadable()) + { + if (load) // just to see warning messages at load time ! + { + uint8_t *pixels = fh->GetImageData(); (void)pixels; + uint32_t lgth = fh->GetImageDataSize(); (void)lgth; + } + std::cout <c_str()<<" is Readable"<c_str()<<" is NOT Readable"<Delete(); fh->Delete(); }