X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Example%2FReWrite.cxx;h=dab56fb6931623ff89aaae412e768c9e38f35ee0;hb=81b83abc1f19db44870ea35907c5f6a102ba5c64;hp=9cdab8e3fafdbe770b8ca490bdb3a57c189c40be;hpb=61f7dc4d582d5de456fc07ea25700df7c2f6320e;p=gdcm.git diff --git a/Example/ReWrite.cxx b/Example/ReWrite.cxx index 9cdab8e3..dab56fb6 100644 --- a/Example/ReWrite.cxx +++ b/Example/ReWrite.cxx @@ -3,8 +3,8 @@ Program: gdcm Module: $RCSfile: ReWrite.cxx,v $ Language: C++ - Date: $Date: 2005/11/07 09:53:53 $ - Version: $Revision: 1.16 $ + Date: $Date: 2006/04/19 10:23:56 $ + Version: $Revision: 1.20 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or @@ -30,8 +30,9 @@ int main(int argc, char *argv[]) " Re write a full gdcm-readable Dicom image ", " (usefull when the file header is not very straight). ", " ", - " usage: ReWrite filein=inputFileName fileout=anonymizedFileName ", - " [mode=write mode] [noshadow] [noseq][debug] ", + " usage: ReWrite filein=inputFileName fileout=outputFileName ", + " [mode=write mode] [noshadow] [noseq][debug] ", + " [rubout=xBegin,xEnd,yBegin,yEnd [ruboutvalue=n (<255)] ] ", " ", " mode = a (ACR), x (Explicit VR Dicom), r (RAW : only pixels) ", " noshadowseq: user doesn't want to load Private Sequences ", @@ -66,7 +67,7 @@ int main(int argc, char *argv[]) return 0; } - char *mode = am->ArgMgrGetString("mode",(char *)"X"); + const char *mode = am->ArgMgrGetString("mode","X"); int loadMode = gdcm::LD_ALL; if ( am->ArgMgrDefined("noshadowseq") ) @@ -83,6 +84,27 @@ int main(int argc, char *argv[]) if (am->ArgMgrDefined("debug")) gdcm::Debug::DebugOn(); + + bool fail = false; + int *boundVal; + int ruboutVal; + bool rubout = false; + if (am->ArgMgrDefined("rubout")) + { + int nbBound; + boundVal = am->ArgMgrGetListOfInt("rubout", &nbBound); + + if (nbBound !=4) + { + std::cout << "Illegal number of 'rubout' boundary values (expected : 4, found:" + << nbBound << "); 'rubout' ignored" << std::endl; + fail = true; + } + + ruboutVal = am->ArgMgrGetInt("ruboutvalue", 0); + rubout = true; + } + // if unused Params we give up if ( am->ArgMgrPrintUnusedLabels() ) @@ -163,7 +185,55 @@ int main(int argc, char *argv[]) // Since we just ReWrite the image, we know no modification // was performed on the pixels. // We don't want this image appears as a 'Secondary Captured image' - fh->SetKeepMediaStorageSOPClassUID(true); + fh->SetContentType(gdcm::UNMODIFIED_PIXELS_IMAGE); + + + if (rubout) + { + if (boundVal[0]<0 || boundVal[0]>nX) + { + std::cout << "xBegin out of bounds; 'rubout' ignored" << std::endl; + fail = true; + } + if (boundVal[1]<0 || boundVal[1]>nX) + { + std::cout << "xEnd out of bounds; 'rubout' ignored" << std::endl; + fail = true; + } + if (boundVal[0] > boundVal[1]) + { + std::cout << "xBegin greater than xEnd; 'rubout' ignored" << std::endl; + fail = true; + } + if (boundVal[2]<0 || boundVal[2]>nY) + { + std::cout << "yBegin out of bounds; 'rubout' ignored" << std::endl; + fail = true; + } + if (boundVal[3]<0 || boundVal[3]>nY) + { + std::cout << "yEnd out of bounds; 'rubout' ignored" << std::endl; + fail = true; + } + if (boundVal[2] > boundVal[3]) + { + std::cout << "yBegin greater than yEnd; 'rubout' ignored" << std::endl; + fail = true; + } + if (!fail) + { + int pixelLength = f->GetBitsAllocated()/8; + int lineLength = nX * sPP * pixelLength; + size_t lengthToRubout = (boundVal[1]-boundVal[0])*sPP*pixelLength; + int offsetToBeginOfRubout = boundVal[0]*sPP*pixelLength+lineLength*boundVal[2]; + + for(int rbl=boundVal[2]; rbl