X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=Testing%2FCMakeLists.txt;h=15eb490655fb60bdaa540b2e888941d98203e36b;hb=c92079b4881cba2560589210d4baeed9dd4d9cac;hp=2ba2bca1b4afea0c62813d2b76b84896259dbf60;hpb=8fca7bc2830904113dbb5521c009775d964c5c98;p=gdcm.git diff --git a/Testing/CMakeLists.txt b/Testing/CMakeLists.txt index 2ba2bca1..15eb4906 100644 --- a/Testing/CMakeLists.txt +++ b/Testing/CMakeLists.txt @@ -17,11 +17,13 @@ IF (GDCM_DATA_ROOT) SET(TEST_SOURCES ${TEST_SOURCES} TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h PrintAllDocument.cxx # includes generated gdcmDataImages.h + TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h + TestAllEntryVerify.cxx # includes generated gdcmDataImages.h PrintDicomDir.cxx TestChangeHeader.cxx - TestDicomDir.cxx #require DICOMDIR - BuildUpDicomDir.cxx - makeDicomDir.cxx + TestDicomDir.cxx # require DICOMDIR + BuildUpDicomDir.cxx # writes a file named "NewDICOMDIR" + makeDicomDir.cxx # writes a file named "NewDICOMDIR" ) # add test that require VTK: IF(GDCM_VTK) @@ -75,7 +77,7 @@ IF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9) FILE(GLOB GDCM_DATA_IMAGES_GLOB "${GDCM_DATA_ROOT}/*.acr" "${GDCM_DATA_ROOT}/*.dcm" -# "${GDCM_DATA_ROOT}/*.nema" + "${GDCM_DATA_ROOT}/*.nema" "${GDCM_DATA_ROOT}/*.ima" ) ELSE(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9) @@ -87,7 +89,7 @@ ELSE(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9) "${GDCM_DATA_ROOT}/*.dcm" ) FILE(GLOB GDCM_DATA_IMAGES_GLOB_NEMA -# "${GDCM_DATA_ROOT}/*.nema" + "${GDCM_DATA_ROOT}/*.nema" ) FILE(GLOB GDCM_DATA_IMAGES_GLOB_IMA "${GDCM_DATA_ROOT}/*.ima" @@ -100,27 +102,34 @@ ENDIF(${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION} GREATER 1.9) # Black list of images known to break lots of readers (efilm, xmedcon ...): SET(BLACK_LIST - "gdcm-JPEG-LossLessThoravision.dcm" # serial killer - "cr172241.dcm" #temporarily remove as it kills my gnome session - # (but not kde) - "emptyImage.dcm" #the png looks ugly... - "irmPhlipsNew1.dcm" #png looks ugly - "mriThruVPRO.dcm" #png looks ugly - "gdcm-MR-SIEMENS-16-1.acr" #segfaults TestReadWriteReadCompare - #segfaults TestReadWriteReadCompare: this image looks corrupted: - # - it's pixel data is 132096 bytes long - # - it has a size of 256x256 with 16 bytes per pixel, i.e. a size - # of 256*256*2 = 131072 bytes. - # Since there is a missmatch, when we have the following call stack: - # gdcmFile::GetImageData() - # PixelData = new uint8_t[ImageDataSize]; - # \--->::GetImageDataIntoVector(destination, ImageDataSize) - # \---> ::ReadPixelData(destination) - # \---> fread(destination, Header->GetPixelAreaLength(), 1, fp); - # we get a segfault because : - # - destination is ImageDataSize i.e. 131072 bytes long - # - Header->GetPixelAreaLength() = 132096 bytes long - "oldACR00001.ima" + # serial killer (also segfaults vtkgdcmViewer, but NOT PrintFile) + "gdcm-JPEG-LossLessThoravision.dcm" + #temporarily remove as it kills my gnome session (but not kde) + "KODAK-12-MONO1-Odd_Terminated_Sequence.dcm" + #png looks ugly + "emptyImage.dcm" + #png looks ugly + "PHILIPS_Gyroscan-8-MONO2-Odd_Sequence.dcm" + #png looks ugly + "mriThruVPRO.dcm" + #segfaults TestReadWriteReadCompare (same pb as below) + "gdcm-MR-SIEMENS-16-1.acr" + # see comments in gdcmData ref file TestAllEntryVerifyReference.txt + "SIEMENS_GBS_III-16-ACR_NEMA_1.acr" + #segfaults TestReadWriteReadCompare (pixels not parsed properly): + "I9000001.dcm" + "PICKER-16-MONO2-Nested_icon.dcm" + "SIEMENS_Sonata-16-MONO2-Value_Multiplicity.dcm" + # Fails on TestAllReadCompareDicom at the RE-reading stage with message: + # Big trouble : Pixel Element (7fe0,10) NOT found + # The temporary file GDCMDATAHOME/BaselineDicom/SIEMENS_Sonata-12-MONO2-SQ.dcm + # stops after the first binEntry (binary entry) as can be seen with + # " gdcmbin/bin/PrintHeader + # GDCMDATAHOME/BaselineDicom/SIEMENS_Sonata-12-MONO2-SQ.dcm " + # and effectively the pixels are missing (as well as all the entries + # after tag 0029|1010) + # Note: this file was previously known as E00001S03I0015.dcm + "SIEMENS_Sonata-12-MONO2-SQ.dcm" ) # gdcm-ACR-LibIDO seems to be cut